RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 AAMPQ13685 434 aa12.05□□□□□ -0.48
CNOT1-208ENST00000565697 ERO1BQ86YB8 467 aa12.05□□□□□ -0.48
CNOT1-208ENST00000565697 TEX11Q8IYF3 940 aa12.05□□□□□ -0.48
CNOT1-208ENST00000565697 ZNF384Q8TF68 577 aa12.05□□□□□ -0.48
CNOT1-208ENST00000565697 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
CNOT1-208ENST00000565697 AATFQ9NY61 560 aaKnown RBP eCLIP12.05□□□□□ -0.48
CNOT1-208ENST00000565697 RFX7Q2KHR2 1363 aa12.05□□□□□ -0.48
CNOT1-208ENST00000565697 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
CNOT1-208ENST00000565697 CFHR5Q9BXR6 569 aa12.04□□□□□ -0.48
CNOT1-208ENST00000565697 BCL11AQ9H165 835 aa12.04□□□□□ -0.48
CNOT1-208ENST00000565697 DHX36Q9H2U1 1008 aaKnown RBP12.04□□□□□ -0.48
CNOT1-208ENST00000565697 DDX4Q9NQI0 724 aaKnown RBP12.04□□□□□ -0.48
CNOT1-208ENST00000565697 PIH1D3Q9NQM4 214 aaKnown RBP12.04□□□□□ -0.48
CNOT1-208ENST00000565697 ZNF112Q9UJU3 913 aa12.04□□□□□ -0.48
CNOT1-208ENST00000565697 OTOFQ9HC10 1997 aa12.04□□□□□ -0.48
CNOT1-208ENST00000565697 TESPA1A2RU30 521 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-208ENST00000565697 TBC1D12O60347 775 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 ATP5JP18859 108 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 CYP7A1P22680 504 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 PPATQ06203 517 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 NOM1Q5C9Z4 860 aaKnown RBP12.03□□□□□ -0.48
CNOT1-208ENST00000565697 NOL9Q5SY16 702 aaKnown RBP12.03□□□□□ -0.48
CNOT1-208ENST00000565697 ZFPM1Q8IX07 1006 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 MAGEB6Q8N7X4 407 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 ZKSCAN4Q969J2 545 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-208ENST00000565697 GPATCH3Q96I76 525 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-208ENST00000565697 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 PCNTO95613 3336 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 ATRNL1Q5VV63 1379 aa12.03□□□□□ -0.48
CNOT1-208ENST00000565697 COL2A1P02458 1487 aaPredicted RBP12.02□□□□□ -0.48
CNOT1-208ENST00000565697 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
CNOT1-208ENST00000565697 CETPP11597 493 aa12.02□□□□□ -0.49
CNOT1-208ENST00000565697 GJA5P36382 358 aa12.02□□□□□ -0.49
CNOT1-208ENST00000565697 MAP3K10Q02779 954 aa12.02□□□□□ -0.49
CNOT1-208ENST00000565697 PPIL2Q13356 520 aa12.02□□□□□ -0.49
CNOT1-208ENST00000565697 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
CNOT1-208ENST00000565697 SH3RF3Q8TEJ3 882 aaPredicted RBP12.02□□□□□ -0.49
CNOT1-208ENST00000565697 CRBNQ96SW2 442 aa12.02□□□□□ -0.49
CNOT1-208ENST00000565697 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
CNOT1-208ENST00000565697 ANTXR1Q9H6X2 564 aa12.02□□□□□ -0.49
CNOT1-208ENST00000565697 LAMB1P07942 1786 aa12.02□□□□□ -0.49
CNOT1-208ENST00000565697 DOCK2Q92608 1830 aa12.02□□□□□ -0.49
CNOT1-208ENST00000565697 CCL15-CCL14A0A0B4J2E2 113 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 CTNND1O60716 968 aaKnown RBP12.01□□□□□ -0.49
CNOT1-208ENST00000565697 TBC1D8O95759 1140 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 INPP5BP32019 993 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 CCL15Q16663 113 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 SH3BP5LQ7L8J4 393 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 ADGRA1Q86SQ6 560 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 SCYL3Q8IZE3 742 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 TGFBRAP1Q8WUH2 860 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 MS4A4AQ96JQ5 239 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.01□□□□□ -0.492e-12■□□□□ 8.7
CNOT1-208ENST00000565697 BOLA2Q9H3K6 86 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.01□□□□□ -0.49
CNOT1-208ENST00000565697 PICK1Q9NRD5 415 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 PAG1Q9NWQ8 432 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 PI4KBQ9UBF8 816 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 HERC5Q9UII4 1024 aaKnown RBP12.01□□□□□ -0.49
CNOT1-208ENST00000565697 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 CASP8AP2Q9UKL3 1982 aa12.01□□□□□ -0.49
CNOT1-208ENST00000565697 MYO5AQ9Y4I1 1855 aaKnown RBP12□□□□□ -0.49
CNOT1-208ENST00000565697 PHF20L1A8MW92 1017 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 GPR25O00155 361 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 IGF2BP3O00425 579 aaKnown RBP eCLIP12□□□□□ -0.49
CNOT1-208ENST00000565697 GOLIM4O00461 696 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 IRF6O14896 467 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 SMARCA5O60264 1052 aaPredicted RBP12□□□□□ -0.49
CNOT1-208ENST00000565697 HLA-DOAP06340 250 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 USP5P45974 858 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 SLC9C2Q5TAH2 1124 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 HAUS7Q99871 368 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 ZCCHC17Q9NP64 241 aaKnown RBP12□□□□□ -0.49
CNOT1-208ENST00000565697 ECHDC1Q9NTX5 307 aa12□□□□□ -0.49
CNOT1-208ENST00000565697 MAGEB6P1A0A0J9YX57 407 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 CXCL11O14625 94 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 FKTNO75072 461 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 PDE6AP16499 860 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 DGKZQ13574 1117 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 ZSCAN25Q6NSZ9 544 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 CTU1Q7Z7A3 348 aaKnown RBP11.99□□□□□ -0.49
CNOT1-208ENST00000565697 FOXP4Q8IVH2 680 aaPredicted RBP11.99□□□□□ -0.49
CNOT1-208ENST00000565697 MAPKAPK5Q8IW41 473 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 GCC1Q96CN9 775 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 ZFYVE28Q9HCC9 887 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 KCNH4Q9UQ05 1017 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 FLT1P17948 1338 aa11.99□□□□□ -0.49
CNOT1-208ENST00000565697 ZNF532Q9HCE3 1301 aa11.98□□□□□ -0.49
CNOT1-208ENST00000565697 ERC2O15083 957 aa11.98□□□□□ -0.49
CNOT1-208ENST00000565697 PTPRAP18433 802 aa11.98□□□□□ -0.49
CNOT1-208ENST00000565697 DYNLL1P63167 89 aaKnown RBP11.98□□□□□ -0.49
CNOT1-208ENST00000565697 PKN2Q16513 984 aaKnown RBP11.98□□□□□ -0.49
CNOT1-208ENST00000565697 CRACR2BQ8N4Y2 399 aaPredicted RBP11.98□□□□□ -0.49
CNOT1-208ENST00000565697 MIGA1Q8NAN2 632 aa11.98□□□□□ -0.49
CNOT1-208ENST00000565697 ZNF296Q8WUU4 475 aaPredicted RBP11.98□□□□□ -0.49
CNOT1-208ENST00000565697 BRI3BPQ8WY22 251 aa11.98□□□□□ -0.49
CNOT1-208ENST00000565697 PTPN18Q99952 460 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms