RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	ZHX2	Q9Y6X8	837 aa		27.63	■■■□□ 2.01
KIFC3-223	ENST00000565684	CXCL11	O14625	94 aa		27.62	■■■□□ 2.01
KIFC3-223	ENST00000565684	SOX10	P56693	466 aa		27.62	■■■□□ 2.01
KIFC3-223	ENST00000565684	RRP1B	Q14684	758 aa	Known RBP	27.62	■■■□□ 2.01
KIFC3-223	ENST00000565684	MAPKAPK5	Q8IW41	473 aa		27.62	■■■□□ 2.01
KIFC3-223	ENST00000565684	ADGRA2	Q96PE1	1338 aa		27.62	■■■□□ 2.01
KIFC3-223	ENST00000565684	GPAT2	Q6NUI2	795 aa		27.61	■■■□□ 2.01
KIFC3-223	ENST00000565684	CCDC84	Q86UT8	332 aa	Predicted RBP	27.61	■■■□□ 2.01
KIFC3-223	ENST00000565684	MAGEB6	Q8N7X4	407 aa		27.61	■■■□□ 2.01
KIFC3-223	ENST00000565684	NAV1	Q8NEY1	1877 aa		27.6	■■■□□ 2.01
KIFC3-223	ENST00000565684		A0A0G2JLL6	359 aa	Predicted RBP	27.6	■■■□□ 2.01
KIFC3-223	ENST00000565684	PDHX	O00330	501 aa		27.6	■■■□□ 2.01
KIFC3-223	ENST00000565684	PRRT2	Q7Z6L0	340 aa	Predicted RBP	27.6	■■■□□ 2.01
KIFC3-223	ENST00000565684	MYH7	P12883	1935 aa		27.6	■■■□□ 2.01
KIFC3-223	ENST00000565684	MIGA1	Q8NAN2	632 aa		27.59	■■■□□ 2.01
KIFC3-223	ENST00000565684	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	27.59	■■■□□ 2.01
KIFC3-223	ENST00000565684	DNAJC18	Q9H819	358 aa		27.59	■■■□□ 2.01
KIFC3-223	ENST00000565684	EFCC1	Q9HA90	598 aa		27.59	■■■□□ 2.01
KIFC3-223	ENST00000565684	PTPN22	Q9Y2R2	807 aa		27.59	■■■□□ 2.01
KIFC3-223	ENST00000565684	BRCA2	P51587	3418 aa		27.59	■■■□□ 2.01
KIFC3-223	ENST00000565684	RBBP6	Q7Z6E9	1792 aa	Known RBP	27.58	■■■□□ 2.01
KIFC3-223	ENST00000565684	MGAM	O43451	1857 aa		27.58	■■■□□ 2.01
KIFC3-223	ENST00000565684	IFIT2	P09913	472 aa	Known RBP	27.58	■■■□□ 2.01
KIFC3-223	ENST00000565684	MAP3K12	Q12852	859 aa		27.58	■■■□□ 2.01
KIFC3-223	ENST00000565684	DHX36	Q9H2U1	1008 aa	Known RBP	27.58	■■■□□ 2.01
KIFC3-223	ENST00000565684	PI4KB	Q9UBF8	816 aa		27.58	■■■□□ 2.01
KIFC3-223	ENST00000565684	HERC5	Q9UII4	1024 aa	Known RBP	27.58	■■■□□ 2.01
KIFC3-223	ENST00000565684	C17orf99	Q6UX52	265 aa		27.57	■■■□□ 2
KIFC3-223	ENST00000565684	METTL16	Q86W50	562 aa	Known RBP	27.57	■■■□□ 2
KIFC3-223	ENST00000565684	PALD1	Q9ULE6	856 aa		27.57	■■■□□ 2
KIFC3-223	ENST00000565684	CAP2	P40123	477 aa		27.56	■■■□□ 2
KIFC3-223	ENST00000565684	MLLT1	Q03111	559 aa	Predicted RBP	27.56	■■■□□ 2
KIFC3-223	ENST00000565684	ARHGAP39	Q9C0H5	1083 aa		27.56	■■■□□ 2
KIFC3-223	ENST00000565684	BCL11A	Q9H165	835 aa		27.56	■■■□□ 2
KIFC3-223	ENST00000565684	TRIM75P	A6NK02	468 aa		27.55	■■■□□ 2
KIFC3-223	ENST00000565684	LACTB	P83111	547 aa	Predicted RBP	27.55	■■■□□ 2
KIFC3-223	ENST00000565684	TMED8	Q6PL24	325 aa	Predicted RBP	27.55	■■■□□ 2
KIFC3-223	ENST00000565684	EDC3	Q96F86	508 aa	Known RBP	27.55	■■■□□ 2
KIFC3-223	ENST00000565684	SAP30BP	Q9UHR5	308 aa	Known RBP	27.55	■■■□□ 2
KIFC3-223	ENST00000565684	CPA4	Q9UI42	421 aa		27.55	■■■□□ 2
KIFC3-223	ENST00000565684	TTF1	Q15361	905 aa	Predicted RBP	27.54	■■■□□ 2
KIFC3-223	ENST00000565684	DNAJC2	Q99543	621 aa	Known RBP	27.54	■■■□□ 2
KIFC3-223	ENST00000565684	RIOK1	Q9BRS2	568 aa	Known RBP	27.54	■■■□□ 2
KIFC3-223	ENST00000565684	GOLIM4	O00461	696 aa		27.53	■■■□□ 2
KIFC3-223	ENST00000565684	CYP2C8	P10632	490 aa		27.53	■■■□□ 2
KIFC3-223	ENST00000565684	CTGF	P29279	349 aa		27.53	■■■□□ 2
KIFC3-223	ENST00000565684	JAG1	P78504	1218 aa		27.53	■■■□□ 2
KIFC3-223	ENST00000565684	GADL1	Q6ZQY3	521 aa		27.53	■■■□□ 2
KIFC3-223	ENST00000565684	FASTKD5	Q7L8L6	764 aa	Known RBP	27.53	■■■□□ 2
KIFC3-223	ENST00000565684	CERS3	Q8IU89	383 aa		27.53	■■■□□ 2
KIFC3-223	ENST00000565684	TCRBV5S4A2T	A0A5A2	114 aa		27.52	■■■□□ 2
KIFC3-223	ENST00000565684	SMARCA5	O60264	1052 aa	Predicted RBP	27.52	■■■□□ 2
KIFC3-223	ENST00000565684	PDE6A	P16499	860 aa		27.52	■■■□□ 2
KIFC3-223	ENST00000565684	SLC4A8	Q2Y0W8	1093 aa		27.52	■■■□□ 2
KIFC3-223	ENST00000565684	LRRCC1	Q9C099	1032 aa		27.52	■■■□□ 2
KIFC3-223	ENST00000565684	ATP5J	P18859	108 aa		27.51	■■□□□ 1.99
KIFC3-223	ENST00000565684	SHROOM1	Q2M3G4	852 aa	Predicted RBP	27.51	■■□□□ 1.99
KIFC3-223	ENST00000565684	SLC9C2	Q5TAH2	1124 aa		27.51	■■□□□ 1.99
KIFC3-223	ENST00000565684	FOXP4	Q8IVH2	680 aa	Predicted RBP	27.51	■■□□□ 1.99
KIFC3-223	ENST00000565684	PARK7	Q99497	189 aa	Known RBP	27.51	■■□□□ 1.99
KIFC3-223	ENST00000565684	BOLA2	Q9H3K6	86 aa		27.5	■■□□□ 1.99
KIFC3-223	ENST00000565684	SLC45A1	Q9Y2W3	748 aa		27.5	■■□□□ 1.99
KIFC3-223	ENST00000565684	ZNF532	Q9HCE3	1301 aa		27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	BCR	P11274	1271 aa		27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	USP5	P45974	858 aa		27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	RRP1	P56182	461 aa	Known RBP	27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	SPP2	Q13103	211 aa		27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	TREML2	Q5T2D2	321 aa		27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	ZNF280C	Q8ND82	737 aa		27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	PAG1	Q9NWQ8	432 aa		27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	AGTPBP1	Q9UPW5	1226 aa		27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	PTCH2	Q9Y6C5	1203 aa		27.49	■■□□□ 1.99
KIFC3-223	ENST00000565684	USP17L5	A8MUK1	530 aa		27.48	■■□□□ 1.99
KIFC3-223	ENST00000565684	ARHGEF6	Q15052	776 aa		27.48	■■□□□ 1.99
KIFC3-223	ENST00000565684	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	27.48	■■□□□ 1.99
KIFC3-223	ENST00000565684	ARMC5	Q96C12	935 aa		27.48	■■□□□ 1.99
KIFC3-223	ENST00000565684	HAUS7	Q99871	368 aa		27.48	■■□□□ 1.99
KIFC3-223	ENST00000565684	TBC1D2	Q9BYX2	928 aa		27.48	■■□□□ 1.99
KIFC3-223	ENST00000565684	DCTPP1	Q9H773	170 aa		27.48	■■□□□ 1.99
KIFC3-223	ENST00000565684	MAGEB6P1	A0A0J9YX57	407 aa		27.47	■■□□□ 1.99
KIFC3-223	ENST00000565684	ECM2	O94769	699 aa	Predicted RBP	27.47	■■□□□ 1.99
KIFC3-223	ENST00000565684	HLA-DOA	P06340	250 aa		27.47	■■□□□ 1.99
KIFC3-223	ENST00000565684	KIF22	Q14807	665 aa		27.47	■■□□□ 1.99
KIFC3-223	ENST00000565684	SLFNL1	Q499Z3	407 aa		27.47	■■□□□ 1.99
KIFC3-223	ENST00000565684	PROCA1	Q8NCQ7	364 aa	Predicted RBP	27.47	■■□□□ 1.99
KIFC3-223	ENST00000565684	TRIM47	Q96LD4	638 aa		27.47	■■□□□ 1.99
KIFC3-223	ENST00000565684	MKI67	P46013	3256 aa	Known RBP	27.47	■■□□□ 1.99
KIFC3-223	ENST00000565684	BAZ2A	Q9UIF9	1905 aa	Known RBP	27.47	■■□□□ 1.99
KIFC3-223	ENST00000565684	GDF11	O95390	407 aa		27.46	■■□□□ 1.99
KIFC3-223	ENST00000565684	PCDHB15	Q9Y5E8	787 aa		27.46	■■□□□ 1.99
KIFC3-223	ENST00000565684	ASNS	P08243	561 aa		27.45	■■□□□ 1.98
KIFC3-223	ENST00000565684	HMGCS2	P54868	508 aa		27.45	■■□□□ 1.98
KIFC3-223	ENST00000565684	SH3D19	Q5HYK7	790 aa		27.45	■■□□□ 1.98
KIFC3-223	ENST00000565684	WDR18	Q9BV38	432 aa		27.45	■■□□□ 1.98
KIFC3-223	ENST00000565684	TRIM34	Q9BYJ4	488 aa		27.45	■■□□□ 1.98
KIFC3-223	ENST00000565684	EHD4	Q9H223	541 aa		27.45	■■□□□ 1.98
KIFC3-223	ENST00000565684	ZBTB21	Q9ULJ3	1066 aa		27.45	■■□□□ 1.98
KIFC3-223	ENST00000565684	MYH8	P13535	1937 aa		27.44	■■□□□ 1.98
KIFC3-223	ENST00000565684	GNRH1	P01148	92 aa		27.44	■■□□□ 1.98
KIFC3-223	ENST00000565684	CHGB	P05060	677 aa		27.44	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms