RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 KIF1BPQ96EK5 621 aa13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 ZCCHC17Q9NP64 241 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 SAP30BPQ9UHR5 308 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 FLT1P17948 1338 aa13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 PDE4DIPQ5VU43 2346 aa13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 KIAA0100Q14667 2235 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 A0A0G2JLL6 359 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 CTGFP29279 349 aa13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 PDE3AQ14432 1141 aa13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 SHROOM1Q2M3G4 852 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 C17orf99Q6UX52 265 aa13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 GADL1Q6ZQY3 521 aa13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 PRRT2Q7Z6L0 340 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 PALD1Q9ULE6 856 aa13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 ADGRA2Q96PE1 1338 aa13.35□□□□□ -0.27
NSMCE1-210ENST00000565626 PLCG2P16885 1265 aa13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 JAG1P78504 1218 aa13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 LACTBP83111 547 aaPredicted RBP13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 DNAJC18Q9H819 358 aa13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 PI4KBQ9UBF8 816 aa13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 PTCH2Q9Y6C5 1203 aa13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 COL2A1P02458 1487 aaPredicted RBP13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 ZSWIM8A7E2V4 1837 aa13.34□□□□□ -0.27
NSMCE1-210ENST00000565626 MAST2Q6P0Q8 1798 aa13.33□□□□□ -0.28
NSMCE1-210ENST00000565626 SMARCA5O60264 1052 aaPredicted RBP13.33□□□□□ -0.28
NSMCE1-210ENST00000565626 IFIT2P09913 472 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-210ENST00000565626 CAP2P40123 477 aa13.33□□□□□ -0.28
NSMCE1-210ENST00000565626 MAP3K12Q12852 859 aa13.33□□□□□ -0.28
NSMCE1-210ENST00000565626 SPP2Q13103 211 aa13.33□□□□□ -0.28
NSMCE1-210ENST00000565626 DNAJC2Q99543 621 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-210ENST00000565626 POTEFA5A3E0 1075 aa13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 GOLIM4O00461 696 aa13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 RAB11FIP3O75154 756 aa13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 SLFNL1Q499Z3 407 aa13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 TREML2Q5T2D2 321 aa13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 FASTKD5Q7L8L6 764 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 TRIM47Q96LD4 638 aa13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 PARK7Q99497 189 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 DHX36Q9H2U1 1008 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 HERC5Q9UII4 1024 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-210ENST00000565626 DOCK1Q14185 1865 aa13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 GDF11O95390 407 aa13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 MYCP01106 439 aaPredicted RBP13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 BCRP11274 1271 aa13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 PDE6AP16499 860 aa13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 PSMC4P43686 418 aa13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 METTL16Q86W50 562 aaKnown RBP13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 CRACR2BQ8N4Y2 399 aaPredicted RBP13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 ZNF280CQ8ND82 737 aa13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 ARMC5Q96C12 935 aa13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 RIOK1Q9BRS2 568 aaKnown RBP13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 BOLA2Q9H3K6 86 aa13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 SIPA1L1O43166 1804 aa13.31□□□□□ -0.28
NSMCE1-210ENST00000565626 PHIPQ8WWQ0 1821 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 IGSF3O75054 1194 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 CHGBP05060 677 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 USP5P45974 858 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 HMGCS2P54868 508 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 EVX2Q03828 476 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 KIF22Q14807 665 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 ARHGEF6Q15052 776 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 SLC9C2Q5TAH2 1124 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 FOXP4Q8IVH2 680 aaPredicted RBP13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 SH3TC2Q8TF17 1288 aa13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.3□□□□□ -0.28
NSMCE1-210ENST00000565626 CDK5RAP2Q96SN8 1893 aa13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 TCRBV5S4A2TA0A5A2 114 aa13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 USP17L5A8MUK1 530 aa13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 FMNL1O95466 1100 aaPredicted RBP13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 TTF1Q15361 905 aaPredicted RBP13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 SLC9C1Q4G0N8 1177 aa13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 ZNF333Q96JL9 665 aa13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 LRRCC1Q9C099 1032 aa13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 AGTPBP1Q9UPW5 1226 aa13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 ZNF532Q9HCE3 1301 aa13.29□□□□□ -0.28
NSMCE1-210ENST00000565626 MAGEB6P1A0A0J9YX57 407 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 HLA-DOAP06340 250 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 ATP5JP18859 108 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 EN2P19622 333 aaPredicted RBP13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 OSBPP22059 807 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 PLCD1P51178 756 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 MTMR2Q13614 643 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 LCORLQ8N3X6 602 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 SMCR8Q8TEV9 937 aaPredicted RBP13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 PAG1Q9NWQ8 432 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 SRRDQ9UH36 339 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 ZBTB21Q9ULJ3 1066 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 SLC45A1Q9Y2W3 748 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 PTPRFP10586 1907 aa13.28□□□□□ -0.28
NSMCE1-210ENST00000565626 ASNSP08243 561 aa13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 PRKCZQ05513 592 aa13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 TSHZ3Q63HK5 1081 aa13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 ANKRD13CQ8N6S4 541 aa13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 PROCA1Q8NCQ7 364 aaPredicted RBP13.27□□□□□ -0.29
NSMCE1-210ENST00000565626 SDR42E1Q8WUS8 393 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms