RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 MYBBP1AQ9BQG0 1328 aaKnown RBP14.1□□□□□ -0.15
CAPN3-215ENST00000565559 ZNF853P0CG23 659 aa14.09□□□□□ -0.15
CAPN3-215ENST00000565559 CASP7P55210 303 aa14.09□□□□□ -0.15
CAPN3-215ENST00000565559 LRRC26Q2I0M4 334 aa14.09□□□□□ -0.15
CAPN3-215ENST00000565559 APOBEC3HQ6NTF7 200 aaKnown RBP14.09□□□□□ -0.15
CAPN3-215ENST00000565559 COL6A1P12109 1028 aa14.08□□□□□ -0.16
CAPN3-215ENST00000565559 TRIM32Q13049 653 aa14.08□□□□□ -0.16
CAPN3-215ENST00000565559 GRIK5Q16478 980 aa14.08□□□□□ -0.16
CAPN3-215ENST00000565559 SCYL3Q8IZE3 742 aa14.08□□□□□ -0.16
CAPN3-215ENST00000565559 C8orf58Q8NAV2 365 aa14.08□□□□□ -0.16
CAPN3-215ENST00000565559 EYSQ5T1H1 3165 aa14.07□□□□□ -0.16
CAPN3-215ENST00000565559 TCP10Q12799 353 aa14.07□□□□□ -0.16
CAPN3-215ENST00000565559 CAVIN4Q5BKX8 364 aa14.07□□□□□ -0.16
CAPN3-215ENST00000565559 HHIPL2Q6UWX4 724 aa14.07□□□□□ -0.16
CAPN3-215ENST00000565559 IQSEC3Q9UPP2 1182 aaPredicted RBP14.07□□□□□ -0.16
CAPN3-215ENST00000565559 AGTPBP1Q9UPW5 1226 aa14.07□□□□□ -0.16
CAPN3-215ENST00000565559 SUGT1Q9Y2Z0 365 aa14.07□□□□□ -0.16
CAPN3-215ENST00000565559 PTPRAP18433 802 aa14.06□□□□□ -0.16
CAPN3-215ENST00000565559 GCLCP48506 637 aaPredicted RBP14.06□□□□□ -0.16
CAPN3-215ENST00000565559 SMAD3P84022 425 aaKnown RBP14.06□□□□□ -0.16
CAPN3-215ENST00000565559 MAP3K12Q12852 859 aa14.06□□□□□ -0.16
CAPN3-215ENST00000565559 WDR43Q15061 677 aaKnown RBP eCLIP14.06□□□□□ -0.16
CAPN3-215ENST00000565559 LINS1Q8NG48 757 aa14.06□□□□□ -0.16
CAPN3-215ENST00000565559 TRIB2Q92519 343 aa14.06□□□□□ -0.16
CAPN3-215ENST00000565559 AFG3L2Q9Y4W6 797 aa14.06□□□□□ -0.16
CAPN3-215ENST00000565559 PRUNE2Q8WUY3 3088 aa14.05□□□□□ -0.16
CAPN3-215ENST00000565559 TRIM75PA6NK02 468 aa14.05□□□□□ -0.16
CAPN3-215ENST00000565559 FOXO4P98177 505 aa14.05□□□□□ -0.16
CAPN3-215ENST00000565559 MAP3K21Q5TCX8 1036 aa14.05□□□□□ -0.16
CAPN3-215ENST00000565559 ZNF594Q96JF6 807 aaPredicted RBP14.05□□□□□ -0.16
CAPN3-215ENST00000565559 MUC3AQ02505 3323 aa14.05□□□□□ -0.16
CAPN3-215ENST00000565559 A0A1B0GUL6 1792 aa14.04□□□□□ -0.16
CAPN3-215ENST00000565559 PABPC4Q13310 644 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN3-215ENST00000565559 LMBR1LQ6UX01 489 aa14.04□□□□□ -0.16
CAPN3-215ENST00000565559 TRMT44Q8IYL2 757 aaKnown RBP14.04□□□□□ -0.16
CAPN3-215ENST00000565559 TTYH1Q9H313 450 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-215ENST00000565559 GJD2Q9UKL4 321 aa14.04□□□□□ -0.16
CAPN3-215ENST00000565559 LRRFIP2Q9Y608 721 aaKnown RBP14.04□□□□□ -0.16
CAPN3-215ENST00000565559 LAMA2P24043 3122 aaKnown RBP14.04□□□□□ -0.16
CAPN3-215ENST00000565559 C2orf72A6NCS6 295 aa14.03□□□□□ -0.16
CAPN3-215ENST00000565559 CYP2B6P20813 491 aa14.03□□□□□ -0.16
CAPN3-215ENST00000565559 SHHQ15465 462 aa14.03□□□□□ -0.16
CAPN3-215ENST00000565559 FBXO33Q7Z6M2 555 aa14.03□□□□□ -0.16
CAPN3-215ENST00000565559 SOCS4Q8WXH5 440 aa14.03□□□□□ -0.16
CAPN3-215ENST00000565559 DNAAF4Q8WXU2 420 aa14.03□□□□□ -0.16
CAPN3-215ENST00000565559 MROH5Q6ZUA9 1318 aa14.02□□□□□ -0.17
CAPN3-215ENST00000565559 ANP32CO43423 234 aa14.02□□□□□ -0.17
CAPN3-215ENST00000565559 ZKSCAN1P17029 563 aaPredicted RBP14.02□□□□□ -0.17
CAPN3-215ENST00000565559 FKBP5Q13451 457 aaPredicted RBP14.02□□□□□ -0.17
CAPN3-215ENST00000565559 IL27Q8NEV9 243 aa14.02□□□□□ -0.17
CAPN3-215ENST00000565559 NUDT12Q9BQG2 462 aa14.02□□□□□ -0.17
CAPN3-215ENST00000565559 SENP6Q9GZR1 1112 aaPredicted RBP14.02□□□□□ -0.17
CAPN3-215ENST00000565559 PHF20L1A8MW92 1017 aa14.01□□□□□ -0.17
CAPN3-215ENST00000565559 CTNND1O60716 968 aaKnown RBP14.01□□□□□ -0.17
CAPN3-215ENST00000565559 XRCC5P13010 732 aaKnown RBP14.01□□□□□ -0.17
CAPN3-215ENST00000565559 NFIAQ12857 509 aa14.01□□□□□ -0.17
CAPN3-215ENST00000565559 PDE3AQ14432 1141 aa14.01□□□□□ -0.17
CAPN3-215ENST00000565559 TREML2Q5T2D2 321 aa14.01□□□□□ -0.17
CAPN3-215ENST00000565559 CDC42EP5Q6NZY7 148 aa14.01□□□□□ -0.17
CAPN3-215ENST00000565559 G2E3Q7L622 706 aa14.01□□□□□ -0.17
CAPN3-215ENST00000565559 TSPYL6Q8N831 410 aa14.01□□□□□ -0.17
CAPN3-215ENST00000565559 PROCA1Q8NCQ7 364 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-215ENST00000565559 TMC2Q8TDI7 906 aa14.01□□□□□ -0.17
CAPN3-215ENST00000565559 ATXN2LQ8WWM7 1075 aaKnown RBP14.01□□□□□ -0.17
CAPN3-215ENST00000565559 CACNB2Q08289 660 aaPredicted RBP14□□□□□ -0.17
CAPN3-215ENST00000565559 FLIIQ13045 1269 aa14□□□□□ -0.17
CAPN3-215ENST00000565559 ADAMTS19Q8TE59 1207 aa14□□□□□ -0.17
CAPN3-215ENST00000565559 C1QTNF1Q9BXJ1 281 aa14□□□□□ -0.17
CAPN3-215ENST00000565559 C9orf50Q5SZB4 431 aa13.99□□□□□ -0.17
CAPN3-215ENST00000565559 ZSCAN29Q8IWY8 852 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-215ENST00000565559 USP38Q8NB14 1042 aa13.99□□□□□ -0.17
CAPN3-215ENST00000565559 UHRF1Q96T88 793 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-215ENST00000565559 USP40Q9NVE5 1235 aa13.99□□□□□ -0.17
CAPN3-215ENST00000565559 FAM198AQ9UFP1 575 aa13.99□□□□□ -0.17
CAPN3-215ENST00000565559 HCN4Q9Y3Q4 1203 aa13.99□□□□□ -0.17
CAPN3-215ENST00000565559 DAGLAQ9Y4D2 1042 aa13.99□□□□□ -0.17
CAPN3-215ENST00000565559 ARIH1Q9Y4X5 557 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-215ENST00000565559 CCND3P30281 292 aaPredicted RBP13.98□□□□□ -0.17
CAPN3-215ENST00000565559 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
CAPN3-215ENST00000565559 CCAR1Q8IX12 1150 aaKnown RBP13.98□□□□□ -0.17
CAPN3-215ENST00000565559 WDR66Q8TBY9 1149 aa13.98□□□□□ -0.17
CAPN3-215ENST00000565559 PRDM5Q9NQX1 630 aaPredicted RBP13.98□□□□□ -0.17
CAPN3-215ENST00000565559 THEGQ9P2T0 379 aa13.98□□□□□ -0.17
CAPN3-215ENST00000565559 ATRNL1Q5VV63 1379 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 SYNGAP1Q96PV0 1343 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 DOCK3Q8IZD9 2030 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 ENTPD3O75355 529 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 RGS2P41220 211 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 RTP1P59025 263 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 METTL24Q5JXM2 366 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 EPHA10Q5JZY3 1008 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 ASB2Q96Q27 587 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 PUS3Q9BZE2 481 aaKnown RBP13.97□□□□□ -0.17
CAPN3-215ENST00000565559 ASCC2Q9H1I8 757 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-215ENST00000565559 MORF4L1Q9UBU8 362 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 ADAMTS8Q9UP79 889 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 ATP11BQ9Y2G3 1177 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 AK9Q5TCS8 1911 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 CDH23Q9H251 3354 aa13.97□□□□□ -0.17
CAPN3-215ENST00000565559 MSCO60682 206 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms