RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 TSHZ3Q63HK5 1081 aa18.65■□□□□ 0.58
COMMD4-212ENST00000565517 OTUD7BQ6GQQ9 843 aa18.65■□□□□ 0.58
COMMD4-212ENST00000565517 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
COMMD4-212ENST00000565517 PI4K2BQ8TCG2 481 aa18.65■□□□□ 0.58
COMMD4-212ENST00000565517 OTUD7AQ8TE49 926 aaPredicted RBP18.65■□□□□ 0.58
COMMD4-212ENST00000565517 CRNKL1Q9BZJ0 848 aaKnown RBP18.64■□□□□ 0.57
COMMD4-212ENST00000565517 STAP2Q9UGK3 403 aa18.64■□□□□ 0.57
COMMD4-212ENST00000565517 PALD1Q9ULE6 856 aa18.64■□□□□ 0.57
COMMD4-212ENST00000565517 ATAD5Q96QE3 1844 aa18.64■□□□□ 0.57
COMMD4-212ENST00000565517 PHIPQ8WWQ0 1821 aa18.63■□□□□ 0.57
COMMD4-212ENST00000565517 IRF6O14896 467 aa18.63■□□□□ 0.57
COMMD4-212ENST00000565517 HLA-DOAP06340 250 aa18.63■□□□□ 0.57
COMMD4-212ENST00000565517 SLURP2P0DP57 97 aa18.63■□□□□ 0.57
COMMD4-212ENST00000565517 SNAPC2Q13487 334 aa18.63■□□□□ 0.57
COMMD4-212ENST00000565517 NOM1Q5C9Z4 860 aaKnown RBP18.63■□□□□ 0.57
COMMD4-212ENST00000565517 PTPN18Q99952 460 aa18.63■□□□□ 0.57
COMMD4-212ENST00000565517 PICK1Q9NRD5 415 aa18.63■□□□□ 0.57
COMMD4-212ENST00000565517 KCNH4Q9UQ05 1017 aa18.63■□□□□ 0.57
COMMD4-212ENST00000565517 NAV1Q8NEY1 1877 aa18.63■□□□□ 0.57
COMMD4-212ENST00000565517 CCL15-CCL14A0A0B4J2E2 113 aa18.62■□□□□ 0.57
COMMD4-212ENST00000565517 IGF2BP3O00425 579 aaKnown RBP eCLIP18.62■□□□□ 0.57
COMMD4-212ENST00000565517 ZFYP08048 801 aaPredicted RBP18.62■□□□□ 0.57
COMMD4-212ENST00000565517 CETPP11597 493 aa18.62■□□□□ 0.57
COMMD4-212ENST00000565517 PTPRAP18433 802 aa18.62■□□□□ 0.57
COMMD4-212ENST00000565517 CCL15Q16663 113 aa18.62■□□□□ 0.57
COMMD4-212ENST00000565517 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
COMMD4-212ENST00000565517 TTC6Q86TZ1 520 aa18.62■□□□□ 0.57
COMMD4-212ENST00000565517 DDX60LQ5H9U9 1706 aaKnown RBP18.62■□□□□ 0.57
COMMD4-212ENST00000565517 CXCL11O14625 94 aa18.61■□□□□ 0.57
COMMD4-212ENST00000565517 TBC1D8O95759 1140 aa18.61■□□□□ 0.57
COMMD4-212ENST00000565517 CAP2P40123 477 aa18.61■□□□□ 0.57
COMMD4-212ENST00000565517 PDE1AP54750 535 aa18.61■□□□□ 0.57
COMMD4-212ENST00000565517 NUCB1Q02818 461 aa18.61■□□□□ 0.57
COMMD4-212ENST00000565517 LCORLQ8N3X6 602 aa18.61■□□□□ 0.57
COMMD4-212ENST00000565517 BRI3BPQ8WY22 251 aa18.61■□□□□ 0.57
COMMD4-212ENST00000565517 EHD4Q9H223 541 aa18.61■□□□□ 0.57
COMMD4-212ENST00000565517 ZCCHC17Q9NP64 241 aaKnown RBP18.61■□□□□ 0.57
COMMD4-212ENST00000565517 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
COMMD4-212ENST00000565517 PTPRFP10586 1907 aa18.61■□□□□ 0.57
COMMD4-212ENST00000565517 FAM196BA6NMK8 535 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 MBD4O95243 580 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 IRX6P78412 446 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-212ENST00000565517 SLFNL1Q499Z3 407 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 CHD1LQ86WJ1 897 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 CRACR2BQ8N4Y2 399 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-212ENST00000565517 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 TBC1D2Q9BYX2 928 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 LNPKQ9C0E8 428 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 ARMT1Q9H993 441 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 ATP8A2Q9NTI2 1148 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 GINM1Q9NU53 330 aa18.6■□□□□ 0.57
COMMD4-212ENST00000565517 BAZ2AQ9UIF9 1905 aaKnown RBP18.59■□□□□ 0.57
COMMD4-212ENST00000565517 RNF113AO15541 343 aaKnown RBP18.59■□□□□ 0.57
COMMD4-212ENST00000565517 B4GALNT3Q6L9W6 998 aa18.59■□□□□ 0.57
COMMD4-212ENST00000565517 APPBP2Q92624 585 aa18.59■□□□□ 0.57
COMMD4-212ENST00000565517 PUS7LQ9H0K6 701 aaKnown RBP18.59■□□□□ 0.57
COMMD4-212ENST00000565517 DNAJC18Q9H819 358 aa18.59■□□□□ 0.57
COMMD4-212ENST00000565517 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-212ENST00000565517 SERPINB13Q9UIV8 391 aa18.59■□□□□ 0.57
COMMD4-212ENST00000565517 TAOK2Q9UL54 1235 aa18.59■□□□□ 0.57
COMMD4-212ENST00000565517 AFG3L2Q9Y4W6 797 aa18.59■□□□□ 0.57
COMMD4-212ENST00000565517 ZHX2Q9Y6X8 837 aa18.59■□□□□ 0.57
COMMD4-212ENST00000565517 GPR25O00155 361 aa18.58■□□□□ 0.56
COMMD4-212ENST00000565517 CHGBP05060 677 aa18.58■□□□□ 0.56
COMMD4-212ENST00000565517 TICAM2Q86XR7 235 aa18.58■□□□□ 0.56
COMMD4-212ENST00000565517 TNS4Q8IZW8 715 aa18.58■□□□□ 0.56
COMMD4-212ENST00000565517 SDR42E1Q8WUS8 393 aa18.58■□□□□ 0.56
COMMD4-212ENST00000565517 MCM9Q9NXL9 1143 aa18.58■□□□□ 0.56
COMMD4-212ENST00000565517 POLR3DP05423 398 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-212ENST00000565517 RRP1BQ14684 758 aaKnown RBP18.57■□□□□ 0.56
COMMD4-212ENST00000565517 TATDN1Q6P1N9 297 aa18.57■□□□□ 0.56
COMMD4-212ENST00000565517 FAM43AQ8N2R8 423 aa18.57■□□□□ 0.56
COMMD4-212ENST00000565517 OSBPL3Q9H4L5 887 aa18.57■□□□□ 0.56
COMMD4-212ENST00000565517 BTBD19C9JJ37 291 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 PRKAB2O43741 272 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 ASNSP08243 561 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 PLCD1P51178 756 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 MOGSQ13724 837 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 ANKRD23Q86SG2 305 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 OSBP2Q969R2 916 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 EVI5LQ96CN4 794 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 STRBPQ96SI9 672 aaKnown RBP18.56■□□□□ 0.56
COMMD4-212ENST00000565517 FSD1Q9BTV5 496 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 R3HDMLQ9H3Y0 253 aa18.56■□□□□ 0.56
COMMD4-212ENST00000565517 MYH8P13535 1937 aa18.55■□□□□ 0.56
COMMD4-212ENST00000565517 A0A0G2JLL6 359 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-212ENST00000565517 USP17L5A8MUK1 530 aa18.55■□□□□ 0.56
COMMD4-212ENST00000565517 GABPAQ06546 454 aa18.55■□□□□ 0.56
COMMD4-212ENST00000565517 CRHR2Q13324 411 aa18.55■□□□□ 0.56
COMMD4-212ENST00000565517 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
COMMD4-212ENST00000565517 GIMAP6Q6P9H5 292 aa18.55■□□□□ 0.56
COMMD4-212ENST00000565517 FASTKD5Q7L8L6 764 aaKnown RBP18.55■□□□□ 0.56
COMMD4-212ENST00000565517 PRRT2Q7Z6L0 340 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-212ENST00000565517 PLEKHM2Q8IWE5 1019 aa18.55■□□□□ 0.56
COMMD4-212ENST00000565517 ZNF296Q8WUU4 475 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-212ENST00000565517 ZFYVE28Q9HCC9 887 aa18.55■□□□□ 0.56
COMMD4-212ENST00000565517 SLC4A4Q9Y6R1 1079 aa18.55■□□□□ 0.56
COMMD4-212ENST00000565517 FKTNO75072 461 aa18.54■□□□□ 0.56
COMMD4-212ENST00000565517 GNAT2P19087 354 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms