RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 NAA16Q6N069 864 aaPredicted RBP29.13■■■□□ 2.25
RAB40C-209ENST00000565511 GADL1Q6ZQY3 521 aa29.13■■■□□ 2.25
RAB40C-209ENST00000565511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.13■■■□□ 2.25
RAB40C-209ENST00000565511 MAP4K4O95819 1239 aaPredicted RBP29.12■■■□□ 2.25
RAB40C-209ENST00000565511 MYCP01106 439 aaPredicted RBP29.12■■■□□ 2.25
RAB40C-209ENST00000565511 PSMC4P43686 418 aa29.11■■■□□ 2.25
RAB40C-209ENST00000565511 KIF22Q14807 665 aa29.11■■■□□ 2.25
RAB40C-209ENST00000565511 ARHGEF6Q15052 776 aa29.11■■■□□ 2.25
RAB40C-209ENST00000565511 PARK7Q99497 189 aaKnown RBP29.11■■■□□ 2.25
RAB40C-209ENST00000565511 OSBPP22059 807 aa29.1■■■□□ 2.25
RAB40C-209ENST00000565511 PRPF38BQ5VTL8 546 aaKnown RBP29.1■■■□□ 2.25
RAB40C-209ENST00000565511 MAPKAPK5Q8IW41 473 aa29.1■■■□□ 2.25
RAB40C-209ENST00000565511 DNAJC18Q9H819 358 aa29.1■■■□□ 2.25
RAB40C-209ENST00000565511 DYNLL1P63167 89 aaKnown RBP29.09■■■□□ 2.25
RAB40C-209ENST00000565511 SHROOM1Q2M3G4 852 aaPredicted RBP29.09■■■□□ 2.25
RAB40C-209ENST00000565511 TREML2Q5T2D2 321 aa29.09■■■□□ 2.25
RAB40C-209ENST00000565511 PPP4CP60510 307 aa29.08■■■□□ 2.25
RAB40C-209ENST00000565511 JAG1P78504 1218 aa29.08■■■□□ 2.25
RAB40C-209ENST00000565511 FASTKD5Q7L8L6 764 aaKnown RBP29.08■■■□□ 2.25
RAB40C-209ENST00000565511 TGFBRAP1Q8WUH2 860 aa29.08■■■□□ 2.25
RAB40C-209ENST00000565511 SRRDQ9UH36 339 aa29.08■■■□□ 2.25
RAB40C-209ENST00000565511 FLT1P17948 1338 aa29.08■■■□□ 2.25
RAB40C-209ENST00000565511 SLC34A2O95436 690 aa29.07■■■□□ 2.24
RAB40C-209ENST00000565511 MYH1P12882 1939 aa29.07■■■□□ 2.24
RAB40C-209ENST00000565511 ANTXR1Q9H6X2 564 aa29.07■■■□□ 2.24
RAB40C-209ENST00000565511 DOCK3Q8IZD9 2030 aa29.06■■■□□ 2.24
RAB40C-209ENST00000565511 CAP2P40123 477 aa29.06■■■□□ 2.24
RAB40C-209ENST00000565511 IL1RAPL2Q9NP60 686 aa29.06■■■□□ 2.24
RAB40C-209ENST00000565511 FMNL1O95466 1100 aaPredicted RBP29.05■■■□□ 2.24
RAB40C-209ENST00000565511 GNRH1P01148 92 aa29.05■■■□□ 2.24
RAB40C-209ENST00000565511 AACSQ86V21 672 aa29.05■■■□□ 2.24
RAB40C-209ENST00000565511 SIRT2Q8IXJ6 389 aa29.05■■■□□ 2.24
RAB40C-209ENST00000565511 NOL10Q9BSC4 688 aaKnown RBP29.05■■■□□ 2.24
RAB40C-209ENST00000565511 MYPNQ86TC9 1320 aa29.04■■■□□ 2.24
RAB40C-209ENST00000565511 BAG3O95817 575 aa29.04■■■□□ 2.24
RAB40C-209ENST00000565511 CYP7A1P22680 504 aa29.04■■■□□ 2.24
RAB40C-209ENST00000565511 PRKCZQ05513 592 aa29.04■■■□□ 2.24
RAB40C-209ENST00000565511 SPP2Q13103 211 aa29.04■■■□□ 2.24
RAB40C-209ENST00000565511 SAP30BPQ9UHR5 308 aaKnown RBP29.04■■■□□ 2.24
RAB40C-209ENST00000565511 AGTPBP1Q9UPW5 1226 aa29.04■■■□□ 2.24
RAB40C-209ENST00000565511 COG6Q9Y2V7 657 aa29.04■■■□□ 2.24
RAB40C-209ENST00000565511 SLC45A1Q9Y2W3 748 aa29.04■■■□□ 2.24
RAB40C-209ENST00000565511 IDH1O75874 414 aaKnown RBP29.03■■■□□ 2.24
RAB40C-209ENST00000565511 PRMT2P55345 433 aa29.03■■■□□ 2.24
RAB40C-209ENST00000565511 MTFR1Q15390 333 aa29.03■■■□□ 2.24
RAB40C-209ENST00000565511 SLC4A8Q2Y0W8 1093 aa29.03■■■□□ 2.24
RAB40C-209ENST00000565511 NBPF11Q86T75 865 aa29.03■■■□□ 2.24
RAB40C-209ENST00000565511 MIGA1Q8NAN2 632 aa29.03■■■□□ 2.24
RAB40C-209ENST00000565511 TMEM106CQ9BVX2 250 aa29.03■■■□□ 2.24
RAB40C-209ENST00000565511 PALD1Q9ULE6 856 aa29.03■■■□□ 2.24
RAB40C-209ENST00000565511 GABRQQ9UN88 632 aa29.03■■■□□ 2.24
RAB40C-209ENST00000565511 DDX60LQ5H9U9 1706 aaKnown RBP29.03■■■□□ 2.24
RAB40C-209ENST00000565511 PLCG2P16885 1265 aa29.02■■■□□ 2.24
RAB40C-209ENST00000565511 PI4KBQ9UBF8 816 aa29.02■■■□□ 2.24
RAB40C-209ENST00000565511 HERC5Q9UII4 1024 aaKnown RBP29.02■■■□□ 2.24
RAB40C-209ENST00000565511 HMGCS2P54868 508 aa29.01■■■□□ 2.23
RAB40C-209ENST00000565511 METTL16Q86W50 562 aaKnown RBP29.01■■■□□ 2.23
RAB40C-209ENST00000565511 ZNF280CQ8ND82 737 aa29.01■■■□□ 2.23
RAB40C-209ENST00000565511 RHPN1Q8TCX5 695 aa29.01■■■□□ 2.23
RAB40C-209ENST00000565511 ERC1Q8IUD2 1116 aa29■■■□□ 2.23
RAB40C-209ENST00000565511 MAGEB6Q8N7X4 407 aa29■■■□□ 2.23
RAB40C-209ENST00000565511 DHX36Q9H2U1 1008 aaKnown RBP29■■■□□ 2.23
RAB40C-209ENST00000565511 ZBTB40Q9NUA8 1239 aa29■■■□□ 2.23
RAB40C-209ENST00000565511 APBB1O00213 710 aa28.99■■■□□ 2.23
RAB40C-209ENST00000565511 FCGRTP55899 365 aa28.99■■■□□ 2.23
RAB40C-209ENST00000565511 RAET1EQ8TD07 263 aa28.99■■■□□ 2.23
RAB40C-209ENST00000565511 SHISA4Q96DD7 197 aa28.99■■■□□ 2.23
RAB40C-209ENST00000565511 USP17L5A8MUK1 530 aa28.98■■■□□ 2.23
RAB40C-209ENST00000565511 GDF11O95390 407 aa28.98■■■□□ 2.23
RAB40C-209ENST00000565511 GRK4P32298 578 aa28.98■■■□□ 2.23
RAB40C-209ENST00000565511 PROCA1Q8NCQ7 364 aaPredicted RBP28.98■■■□□ 2.23
RAB40C-209ENST00000565511 NAV1Q8NEY1 1877 aa28.97■■■□□ 2.23
RAB40C-209ENST00000565511 ANKRD13CQ8N6S4 541 aa28.97■■■□□ 2.23
RAB40C-209ENST00000565511 SMCR8Q8TEV9 937 aaPredicted RBP28.97■■■□□ 2.23
RAB40C-209ENST00000565511 HOXD10P28358 340 aa28.96■■■□□ 2.23
RAB40C-209ENST00000565511 SH3D19Q5HYK7 790 aa28.96■■■□□ 2.23
RAB40C-209ENST00000565511 C20orf194Q5TEA3 1177 aa28.96■■■□□ 2.23
RAB40C-209ENST00000565511 MTMR2Q13614 643 aa28.95■■■□□ 2.22
RAB40C-209ENST00000565511 RCAN3Q9UKA8 241 aa28.95■■■□□ 2.22
RAB40C-209ENST00000565511 DDX19BQ9UMR2 479 aa28.95■■■□□ 2.22
RAB40C-209ENST00000565511 IGSF3O75054 1194 aa28.94■■■□□ 2.22
RAB40C-209ENST00000565511 WDR18Q9BV38 432 aa28.94■■■□□ 2.22
RAB40C-209ENST00000565511 ZBTB21Q9ULJ3 1066 aa28.94■■■□□ 2.22
RAB40C-209ENST00000565511 PLXNB2O15031 1838 aa28.94■■■□□ 2.22
RAB40C-209ENST00000565511 PEX10O60683 326 aa28.93■■■□□ 2.22
RAB40C-209ENST00000565511 MS4A1P11836 297 aa28.93■■■□□ 2.22
RAB40C-209ENST00000565511 FLT3LGP49771 235 aa28.93■■■□□ 2.22
RAB40C-209ENST00000565511 EVX2Q03828 476 aa28.93■■■□□ 2.22
RAB40C-209ENST00000565511 FOXP4Q8IVH2 680 aaPredicted RBP28.93■■■□□ 2.22
RAB40C-209ENST00000565511 RPAP2Q8IXW5 612 aaPredicted RBP28.93■■■□□ 2.22
RAB40C-209ENST00000565511 CRACR2BQ8N4Y2 399 aaPredicted RBP28.93■■■□□ 2.22
RAB40C-209ENST00000565511 EDC3Q96F86 508 aaKnown RBP28.93■■■□□ 2.22
RAB40C-209ENST00000565511 RIOK1Q9BRS2 568 aaKnown RBP28.93■■■□□ 2.22
RAB40C-209ENST00000565511 TBC1D2Q9BYX2 928 aa28.93■■■□□ 2.22
RAB40C-209ENST00000565511 ASCC2Q9H1I8 757 aaPredicted RBP28.93■■■□□ 2.22
RAB40C-209ENST00000565511 CEP290O15078 2479 aa28.92■■■□□ 2.22
RAB40C-209ENST00000565511 CCL5P13501 91 aa28.92■■■□□ 2.22
RAB40C-209ENST00000565511 ELNP15502 786 aa28.92■■■□□ 2.22
RAB40C-209ENST00000565511 HSP90AB4PQ58FF6 505 aa28.92■■■□□ 2.22
RAB40C-209ENST00000565511 BCL11AQ9H165 835 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms