RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CTNNA1P35221 906 aaKnown RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 DMTNQ08495 405 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 RAPGEF1Q13905 1077 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 NONOQ15233 471 aaKnown RBP eCLIP5.63□□□□□ -1.51
SMG1-211ENST00000565324 NBPF9Q3BBW0 867 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 CCDC92Q53HC0 331 aaPredicted RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 CDAN1Q8IWY9 1227 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 KRT12Q99456 494 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 LLPHQ9BRT6 129 aaKnown RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 SMARCA5O60264 1052 aaPredicted RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 MX2P20592 715 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 PAK1Q13153 545 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 DIXDC1Q155Q3 683 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 ELF2Q15723 593 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 FLIIQ13045 1269 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 IFIH1Q9BYX4 1025 aaKnown RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 MRPL46Q9H2W6 279 aaKnown RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 RAD54L2Q9Y4B4 1467 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 PDXDC1Q6P996 788 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 HOMEZQ8IX15 550 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 MIS12Q9H081 205 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 PEX19P40855 299 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 RASA3Q14644 834 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 ANGPTL3Q9Y5C1 460 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 PSDA5PKW4 1024 aaPredicted RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 EIF3CLB5ME19 914 aaKnown RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 FGD5Q6ZNL6 1462 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 EIF3CQ99613 913 aaKnown RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 ACTR5Q9H9F9 607 aaPredicted RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 FGFR1OP2Q9NVK5 253 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 SART1O43290 800 aaKnown RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 DKC1O60832 514 aaKnown RBP eCLIP5.63□□□□□ -1.514e-9■■■■■ 30.3
SMG1-211ENST00000565324 SH2D4AQ9H788 454 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 CC2D2AQ9P2K1 1620 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 GNA14O95837 355 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 LMNAP02545 664 aaKnown RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 CLTAP09496 248 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 YWHAEP62258 255 aaKnown RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 PPP1R42Q7Z4L9 355 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 FNBP4Q8N3X1 1017 aaPredicted RBP5.63□□□□□ -1.51
SMG1-211ENST00000565324 RABEP2Q9H5N1 569 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 ZRANB1Q9UGI0 708 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 AMFRQ9UKV5 643 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 NEK2P51955 445 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 TRIM60Q495X7 471 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 CFAP70Q5T0N1 1121 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 BBOF1Q8ND07 529 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 MORC4Q8TE76 937 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 MARCKSP29966 332 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 PROSER2Q86WR7 435 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 CERS3Q8IU89 383 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 GRAMD4Q6IC98 578 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 ZNF449Q6P9G9 518 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 PRDM11Q9NQV5 511 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 RRP15Q9Y3B9 282 aaKnown RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 ZNF445P59923 1031 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 MCF2L2Q86YR7 1114 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 FNBP1Q96RU3 617 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 YY1AP1Q9H869 796 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 FAM8A1Q9UBU6 413 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 TRMT112Q9UI30 125 aaKnown RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 PACSIN2Q9UNF0 486 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 EXOC7Q9UPT5 735 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 CTNND2Q9UQB3 1225 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 NUTM2BA6NNL0 878 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 NUTM2EB1AL46 878 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 EEF1DP29692 281 aaKnown RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 TMTC3Q6ZXV5 915 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 SLC12A5Q9H2X9 1139 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 SCHIP1Q9P0W5 487 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 ANGPTL2Q9UKU9 493 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 CCDC169A6NNP5 214 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 PCYT1AP49585 367 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 DYNC1I2Q13409 638 aaKnown RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 ST13P4Q8IZP2 240 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 ATAD2BQ9ULI0 1458 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 ZNF75DP51815 510 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 ASPHQ12797 758 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 TTLL12Q14166 644 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 RSBN1LQ6PCB5 846 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 PODNQ7Z5L7 613 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 KIFC3Q9BVG8 833 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 RBM8AQ9Y5S9 174 aaKnown RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 THAP12O43422 761 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 TSC1Q92574 1164 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 DHX58Q96C10 678 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 CNOT10Q9H9A5 744 aaKnown RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 ZNF277Q9NRM2 450 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 AMOTL2Q9Y2J4 779 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 COPG1Q9Y678 874 aaKnown RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 POGZQ7Z3K3 1410 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 ZFXP17010 805 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 PDE1AP54750 535 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 TMCO4Q5TGY1 634 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 TRIML1Q8N9V2 468 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 BCAS4Q8TDM0 211 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 LRRC8CQ8TDW0 803 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 CLSTN2Q9H4D0 955 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 KCNG1Q9UIX4 513 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms