RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ZDHHC13Q8IUH4 622 aa7.14□□□□□ -1.27
PALB2-203ENST00000565038 FBXO27Q8NI29 283 aa7.14□□□□□ -1.27
PALB2-203ENST00000565038 GATA6Q92908 595 aa7.14□□□□□ -1.27
PALB2-203ENST00000565038 FAM221AA4D161 298 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 TGFB1P01137 390 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 GARTP22102 1010 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 GRK4P32298 578 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 EIF4A3P38919 411 aaKnown RBP7.13□□□□□ -1.27
PALB2-203ENST00000565038 ZMYM1Q5SVZ6 1142 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 C9orf131Q5VYM1 1079 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 FBXL19Q6PCT2 694 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 CCDC84Q86UT8 332 aaPredicted RBP7.13□□□□□ -1.27
PALB2-203ENST00000565038 SLC51AQ86UW1 340 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 GATAD2BQ8WXI9 593 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 RNF34Q969K3 372 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 WNT10AQ9GZT5 417 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 ATG3Q9NT62 314 aa7.13□□□□□ -1.27
PALB2-203ENST00000565038 SCAMP3O14828 347 aaKnown RBP7.12□□□□□ -1.27
PALB2-203ENST00000565038 TLR3O15455 904 aaKnown RBP7.12□□□□□ -1.27
PALB2-203ENST00000565038 CILPO75339 1184 aa7.12□□□□□ -1.27
PALB2-203ENST00000565038 BPNT1O95861 308 aa7.12□□□□□ -1.27
PALB2-203ENST00000565038 ZNF394Q53GI3 561 aa7.12□□□□□ -1.27
PALB2-203ENST00000565038 ZNF507Q8TCN5 953 aa7.12□□□□□ -1.27
PALB2-203ENST00000565038 ZNF296Q8WUU4 475 aaPredicted RBP7.12□□□□□ -1.27
PALB2-203ENST00000565038 FBRSQ9HAH7 460 aa7.12□□□□□ -1.27
PALB2-203ENST00000565038 METTL5Q9NRN9 209 aaKnown RBP7.12□□□□□ -1.27
PALB2-203ENST00000565038 ADAMTS1Q9UHI8 967 aa7.12□□□□□ -1.27
PALB2-203ENST00000565038 PCDHGB7Q9Y5F8 929 aa7.12□□□□□ -1.27
PALB2-203ENST00000565038 PRR19A6NJB7 356 aa7.11□□□□□ -1.27
PALB2-203ENST00000565038 LEFTY1O75610 366 aa7.11□□□□□ -1.27
PALB2-203ENST00000565038 FAM87AP0C7U9 286 aa7.11□□□□□ -1.27
PALB2-203ENST00000565038 DIEXFQ68CQ4 756 aaKnown RBP7.11□□□□□ -1.27
PALB2-203ENST00000565038 ZNF765Q7L2R6 523 aa7.11□□□□□ -1.27
PALB2-203ENST00000565038 USP48Q86UV5 1035 aa7.11□□□□□ -1.27
PALB2-203ENST00000565038 GIMAP7Q8NHV1 300 aa7.11□□□□□ -1.27
PALB2-203ENST00000565038 OSBPL1AQ9BXW6 950 aa7.11□□□□□ -1.27
PALB2-203ENST00000565038 CORINQ9Y5Q5 1042 aa7.11□□□□□ -1.27
PALB2-203ENST00000565038 GRIN3BO60391 1043 aa7.1□□□□□ -1.27
PALB2-203ENST00000565038 NKG7Q16617 165 aa7.1□□□□□ -1.27
PALB2-203ENST00000565038 FAM196AQ6ZSG2 479 aa7.1□□□□□ -1.27
PALB2-203ENST00000565038 TOP6BLQ8N6T0 577 aa7.1□□□□□ -1.27
PALB2-203ENST00000565038 PSMG3-AS1Q96PY0 264 aa7.1□□□□□ -1.27
PALB2-203ENST00000565038 RNF112Q9ULX5 631 aa7.1□□□□□ -1.27
PALB2-203ENST00000565038 SUPT16HQ9Y5B9 1047 aaKnown RBP7.1□□□□□ -1.27
PALB2-203ENST00000565038 GREM1O60565 184 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 PGRP06401 933 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 SSTR4P31391 388 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 CRKP46108 304 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 HDLBPQ00341 1268 aaKnown RBP7.09□□□□□ -1.27
PALB2-203ENST00000565038 DUSP27Q5VZP5 1158 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 OGFOD3Q6PK18 319 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 ARMCX6Q7L4S7 300 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 METTL16Q86W50 562 aaKnown RBP7.09□□□□□ -1.27
PALB2-203ENST00000565038 KCT2Q8NC54 265 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 KCNQ5Q9NR82 932 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 LEMD3Q9Y2U8 911 aa7.09□□□□□ -1.27
PALB2-203ENST00000565038 HOXA10P31260 410 aaPredicted RBP7.08□□□□□ -1.28
PALB2-203ENST00000565038 RACK1P63244 317 aaKnown RBP7.08□□□□□ -1.28
PALB2-203ENST00000565038 MPP2Q14168 576 aa7.08□□□□□ -1.28
PALB2-203ENST00000565038 SLBPQ14493 270 aaKnown RBP eCLIP7.08□□□□□ -1.28
PALB2-203ENST00000565038 HID1Q8IV36 788 aa7.08□□□□□ -1.28
PALB2-203ENST00000565038 SPON2Q9BUD6 331 aa7.08□□□□□ -1.28
PALB2-203ENST00000565038 DUSP23Q9BVJ7 150 aa7.08□□□□□ -1.28
PALB2-203ENST00000565038 LRRC4CQ9HCJ2 640 aa7.08□□□□□ -1.28
PALB2-203ENST00000565038 UBP1Q9NZI7 540 aa7.08□□□□□ -1.28
PALB2-203ENST00000565038 PIM2Q9P1W9 311 aa7.08□□□□□ -1.28
PALB2-203ENST00000565038 DDX41Q9UJV9 622 aaKnown RBP7.08□□□□□ -1.28
PALB2-203ENST00000565038 POLR3KQ9Y2Y1 108 aaPredicted RBP7.08□□□□□ -1.28
PALB2-203ENST00000565038 TACC3Q9Y6A5 838 aa7.08□□□□□ -1.28
PALB2-203ENST00000565038 SCO2A0A1W2PP80 73 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 MED26O95402 600 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 PLCG1P19174 1290 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 CYP27A1Q02318 531 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 PDE4BQ07343 736 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 PRAMEF13Q5VWM6 474 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 REC114Q7Z4M0 266 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 NT5DC4Q86YG4 428 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 KIAA0825Q8IV33 1275 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 XAGE3Q8WTP9 111 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 EAF1Q96JC9 268 aaPredicted RBP7.07□□□□□ -1.28
PALB2-203ENST00000565038 DPH2Q9BQC3 489 aaPredicted RBP7.07□□□□□ -1.28
PALB2-203ENST00000565038 METTL22Q9BUU2 404 aaPredicted RBP7.07□□□□□ -1.28
PALB2-203ENST00000565038 FOXQ1Q9C009 403 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 PRDM10Q9NQV6 1147 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 TJP2Q9UDY2 1190 aa7.07□□□□□ -1.28
PALB2-203ENST00000565038 CYP26A1O43174 497 aa7.06□□□□□ -1.28
PALB2-203ENST00000565038 LRIG2O94898 1065 aa7.06□□□□□ -1.28
PALB2-203ENST00000565038 APOBRQ0VD83 1088 aa7.06□□□□□ -1.28
PALB2-203ENST00000565038 CWF19L2Q2TBE0 894 aaKnown RBP7.06□□□□□ -1.28
PALB2-203ENST00000565038 CYP27C1Q4G0S4 372 aa7.06□□□□□ -1.28
PALB2-203ENST00000565038 SEZ6Q53EL9 994 aa7.06□□□□□ -1.28
PALB2-203ENST00000565038 ACSF2Q96CM8 615 aaPredicted RBP7.06□□□□□ -1.28
PALB2-203ENST00000565038 BRMS1Q9HCU9 246 aa7.06□□□□□ -1.28
PALB2-203ENST00000565038 COBLO75128 1261 aa7.05□□□□□ -1.28
PALB2-203ENST00000565038 FAM181AQ8N9Y4 354 aa7.05□□□□□ -1.28
PALB2-203ENST00000565038 TMEM87BQ96K49 555 aa7.05□□□□□ -1.28
PALB2-203ENST00000565038 MIPEPQ99797 713 aa7.05□□□□□ -1.28
PALB2-203ENST00000565038 ROBO2Q9HCK4 1378 aa7.05□□□□□ -1.28
PALB2-203ENST00000565038 UPK3BL1B0FP48 263 aa7.04□□□□□ -1.28
PALB2-203ENST00000565038 UPK3BL2E5RIL1 263 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms