RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 MRIQ9BWK5 157 aa22.9■■□□□ 1.26
CLN6-205ENST00000564846 TNKSO95271 1327 aa22.89■■□□□ 1.26
CLN6-205ENST00000564846 PPIP5K2O43314 1243 aa22.89■■□□□ 1.26
CLN6-205ENST00000564846 CDKL5O76039 1030 aa22.89■■□□□ 1.26
CLN6-205ENST00000564846 CPLX2Q6PUV4 134 aaKnown RBP22.89■■□□□ 1.26
CLN6-205ENST00000564846 CDC37L1Q7L3B6 337 aa22.89■■□□□ 1.26
CLN6-205ENST00000564846 TEKT1Q969V4 418 aa22.89■■□□□ 1.26
CLN6-205ENST00000564846 NID2Q14112 1375 aa22.89■■□□□ 1.25
CLN6-205ENST00000564846 FLT1P17948 1338 aa22.89■■□□□ 1.25
CLN6-205ENST00000564846 PRDM1O75626 825 aa22.89■■□□□ 1.25
CLN6-205ENST00000564846 SEC23AQ15436 765 aa22.89■■□□□ 1.25
CLN6-205ENST00000564846 MICU3Q86XE3 530 aa22.89■■□□□ 1.25
CLN6-205ENST00000564846 KCNQ5Q9NR82 932 aa22.89■■□□□ 1.25
CLN6-205ENST00000564846 LMBRD1Q9NUN5 540 aa22.89■■□□□ 1.25
CLN6-205ENST00000564846 PIM2Q9P1W9 311 aa22.89■■□□□ 1.25
CLN6-205ENST00000564846 H3BQV1 296 aa22.88■■□□□ 1.25
CLN6-205ENST00000564846 POLR3DP05423 398 aaPredicted RBP22.88■■□□□ 1.25
CLN6-205ENST00000564846 HDLBPQ00341 1268 aaKnown RBP22.88■■□□□ 1.25
CLN6-205ENST00000564846 R3HDM1Q15032 1099 aaKnown RBP22.88■■□□□ 1.25
CLN6-205ENST00000564846 IFFO2Q5TF58 517 aa22.88■■□□□ 1.25
CLN6-205ENST00000564846 RAB11FIP4Q86YS3 637 aa22.88■■□□□ 1.25
CLN6-205ENST00000564846 VPS33BQ9H267 617 aa22.88■■□□□ 1.25
CLN6-205ENST00000564846 GOLGA8AA7E2F4 631 aa22.87■■□□□ 1.25
CLN6-205ENST00000564846 PRPF40AO75400 957 aaKnown RBP22.87■■□□□ 1.25
CLN6-205ENST00000564846 EVX2Q03828 476 aa22.87■■□□□ 1.25
CLN6-205ENST00000564846 UPF1Q92900 1129 aaKnown RBP eCLIP22.87■■□□□ 1.25
CLN6-205ENST00000564846 ZNF287Q9HBT7 754 aa22.87■■□□□ 1.25
CLN6-205ENST00000564846 NAV1Q8NEY1 1877 aa22.87■■□□□ 1.25
CLN6-205ENST00000564846 FDPSP14324 419 aaKnown RBP22.86■■□□□ 1.25
CLN6-205ENST00000564846 CHAMP1Q96JM3 812 aa22.86■■□□□ 1.25
CLN6-205ENST00000564846 ADD1P35611 737 aaKnown RBP22.86■■□□□ 1.25
CLN6-205ENST00000564846 SCNN1DP51172 638 aa22.86■■□□□ 1.25
CLN6-205ENST00000564846 ENAHQ8N8S7 591 aaPredicted RBP22.86■■□□□ 1.25
CLN6-205ENST00000564846 RXRAP19793 462 aa22.85■■□□□ 1.25
CLN6-205ENST00000564846 CRKP46108 304 aa22.85■■□□□ 1.25
CLN6-205ENST00000564846 PPP2R5BQ15173 497 aa22.85■■□□□ 1.25
CLN6-205ENST00000564846 FOXD4L6Q3SYB3 417 aaPredicted RBP22.85■■□□□ 1.25
CLN6-205ENST00000564846 IFIT1BQ5T764 474 aaKnown RBP22.85■■□□□ 1.25
CLN6-205ENST00000564846 FOXD4L3Q6VB84 417 aaPredicted RBP22.85■■□□□ 1.25
CLN6-205ENST00000564846 RGS22Q8NE09 1264 aa22.85■■□□□ 1.25
CLN6-205ENST00000564846 ZDHHC15Q96MV8 337 aa22.85■■□□□ 1.25
CLN6-205ENST00000564846 ORC3Q9UBD5 711 aaPredicted RBP22.85■■□□□ 1.25
CLN6-205ENST00000564846 SAP30BPQ9UHR5 308 aaKnown RBP22.85■■□□□ 1.25
CLN6-205ENST00000564846 CCDC196A0A1B0GTZ2 297 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 TSPY2A6NKD2 308 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 CDC27P30260 824 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 PLCD1P51178 756 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 ZNF654Q8IZM8 581 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 ZSCAN16Q9H4T2 348 aaPredicted RBP22.84■■□□□ 1.25
CLN6-205ENST00000564846 MKNK2Q9HBH9 465 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 USP40Q9NVE5 1235 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 KLHL40Q2TBA0 621 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 SLC4A8Q2Y0W8 1093 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 DDX60LQ5H9U9 1706 aaKnown RBP22.84■■□□□ 1.25
CLN6-205ENST00000564846 APOBEC3HQ6NTF7 200 aaKnown RBP22.84■■□□□ 1.25
CLN6-205ENST00000564846 KIAA0825Q8IV33 1275 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 TMEM87AQ8NBN3 555 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 MYL10Q9BUA6 226 aa22.84■■□□□ 1.25
CLN6-205ENST00000564846 FAM217BQ9NTX9 383 aaPredicted RBP22.84■■□□□ 1.25
CLN6-205ENST00000564846 CDK5RAP2Q96SN8 1893 aa22.83■■□□□ 1.25
CLN6-205ENST00000564846 GSE1Q14687 1217 aa22.83■■□□□ 1.24
CLN6-205ENST00000564846 RTN1Q16799 776 aa22.83■■□□□ 1.24
CLN6-205ENST00000564846 DALRD3Q5D0E6 543 aaKnown RBP22.83■■□□□ 1.24
CLN6-205ENST00000564846 CATIPQ7Z7H3 387 aa22.83■■□□□ 1.24
CLN6-205ENST00000564846 DYNLL2Q96FJ2 89 aa22.83■■□□□ 1.24
CLN6-205ENST00000564846 DDX49Q9Y6V7 483 aaKnown RBP22.83■■□□□ 1.24
CLN6-205ENST00000564846 SCN9AQ15858 1988 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 YDJCA8MPS7 323 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 WDHD1O75717 1129 aaPredicted RBP22.82■■□□□ 1.24
CLN6-205ENST00000564846 NTRK3Q16288 839 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 CSPP1Q1MSJ5 1256 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 CCDC178Q5BJE1 867 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 FAM47AQ5JRC9 791 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 C16orf86Q6ZW13 317 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 FERMT3Q86UX7 667 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 CCDC144CPQ8IYA2 1237 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 LARGE2Q8N3Y3 721 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 SGIP1Q9BQI5 828 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 SERPINA10Q9UK55 444 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 CD2APQ9Y5K6 639 aa22.82■■□□□ 1.24
CLN6-205ENST00000564846 CALM1P0DP23 149 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 CALM2P0DP24 149 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 CALM3P0DP25 149 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 CDC42EP5Q6NZY7 148 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 TTC6Q86TZ1 520 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 ZNF444Q8N0Y2 327 aaPredicted RBP22.81■■□□□ 1.24
CLN6-205ENST00000564846 FANCBQ8NB91 859 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 MYO3BQ8WXR4 1341 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 STK36Q9NRP7 1315 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 ZNF646O15015 1829 aaPredicted RBP22.81■■□□□ 1.24
CLN6-205ENST00000564846 FOCADQ5VW36 1801 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 PPFIA3O75145 1194 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 IFNAR1P17181 557 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 IARSP41252 1262 aaKnown RBP22.81■■□□□ 1.24
CLN6-205ENST00000564846 TFAP4Q01664 338 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 DNM1Q05193 864 aaKnown RBP22.81■■□□□ 1.24
CLN6-205ENST00000564846 RESTQ13127 1097 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 C8orf76Q96K31 380 aa22.81■■□□□ 1.24
CLN6-205ENST00000564846 ZNF277Q9NRM2 450 aaPredicted RBP22.81■■□□□ 1.24
CLN6-205ENST00000564846 CNPY2Q9Y2B0 182 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms