RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PDE4CQ08493 712 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 E2F5Q15329 346 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 CDAN1Q8IWY9 1227 aa3.86□□□□□ -1.79
CHD9-213ENST00000564845 QTRT2Q9H974 415 aaKnown RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 BMP2KQ9NSY1 1161 aaPredicted RBP3.86□□□□□ -1.79
CHD9-213ENST00000564845 USP17L8P0C7I0 530 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 ATL3Q6DD88 541 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 OXER1Q8TDS5 423 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 GPKOWQ92917 476 aaPredicted RBP eCLIP3.85□□□□□ -1.792e-8■■■■■ 29.1
CHD9-213ENST00000564845 PDLIM2Q96JY6 352 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 A0A0U1RQJ8 604 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 USP17L3A6NCW0 530 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 USP17L4A6NCW7 530 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 PDE6BP35913 854 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 RBM5P52756 815 aaKnown RBP eCLIP3.85□□□□□ -1.79
CHD9-213ENST00000564845 UBXN2AP68543 259 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 ILF2Q12905 390 aaKnown RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 FKBP15Q5T1M5 1219 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 USP49Q70CQ1 688 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 USP17L1Q7RTZ2 530 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 ATRIPQ8WXE1 791 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 SMARCE1Q969G3 411 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 CDCA7Q9BWT1 371 aaPredicted RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 DACT1Q9NYF0 836 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 TNS3Q68CZ2 1445 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 EZRP15311 586 aaKnown RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 PPP1R2P3Q6NXS1 205 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 FAM43BQ6ZT52 329 aaPredicted RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 VPS36Q86VN1 386 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 PLEKHA4Q9H4M7 779 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 TRMT1Q9NXH9 659 aaKnown RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 CEP126Q9P2H0 1117 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 DRC7Q8IY82 874 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 AK7Q96M32 723 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 ATF5Q9Y2D1 282 aaPredicted RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 CCDC66A2RUB6 948 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 BLOC1S2Q6QNY1 142 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 CROCCP2Q86T23 111 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 ZNF384Q8TF68 577 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 TRIM34Q9BYJ4 488 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 CWC22Q9HCG8 908 aaKnown RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 CCNL1Q9UK58 526 aaPredicted RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 TTC41PQ6P2S7 1318 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 KLF18A0A0U1RQI7 1052 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 PLCD1P51178 756 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 TTC6Q86TZ1 520 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 SREK1Q8WXA9 508 aaKnown RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 STAP2Q9UGK3 403 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 SLC4A4Q9Y6R1 1079 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 GLRX3O76003 335 aaKnown RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 STARD3NLO95772 234 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 SETSIPP0DME0 302 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 HSPA4P34932 840 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 NASPP49321 788 aaPredicted RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 STIM1Q13586 685 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 ATP2B3Q16720 1220 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 PTPROQ16827 1216 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 MAPKAPK5Q8IW41 473 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 FRMPD2Q68DX3 1309 aaPredicted RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 G3V3G9 751 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 DCAF8Q5TAQ9 597 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 SASS6Q6UVJ0 657 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 DNAAF5Q86Y56 855 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 SLC17A8Q8NDX2 589 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 EPB41L4AQ9HCS5 686 aaPredicted RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 ZBTB12Q9Y330 459 aaPredicted RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 USP42Q9H9J4 1324 aaKnown RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 COL16A1Q07092 1604 aaPredicted RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 DCCP43146 1447 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.85□□□□□ -1.79
CHD9-213ENST00000564845 PRPHP41219 470 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 TCIRG1Q13488 830 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 TFR2Q9UP52 801 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 SCN11AQ9UI33 1791 aa3.85□□□□□ -1.79
CHD9-213ENST00000564845 PP2D1A8MPX8 630 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 RFC4P35249 363 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 BCAS3Q9H6U6 928 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 VPS54Q9P1Q0 977 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 GOLGA1Q92805 767 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 GBP3Q9H0R5 595 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 HMG20BQ9P0W2 317 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 POTEJP0CG39 1038 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 CYP7A1P22680 504 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 CCDC158Q5M9N0 1113 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 TRMT44Q8IYL2 757 aaKnown RBP3.84□□□□□ -1.79
CHD9-213ENST00000564845 SLC26A6Q9BXS9 759 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 CPDO75976 1380 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 NWD2Q9ULI1 1742 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 EYA2O00167 538 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 NKRFO15226 690 aaKnown RBP eCLIP3.84□□□□□ -1.791e-6■■□□□ 11.9
CHD9-213ENST00000564845 ERLIN1O75477 346 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 CFAP157Q5JU67 520 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 NBPF5PQ86XG9 351 aaPredicted RBP3.84□□□□□ -1.79
CHD9-213ENST00000564845 SEPT12Q8IYM1 358 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 EVI5LQ96CN4 794 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 ZSWIM5Q9P217 1185 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 COL22A1Q8NFW1 1626 aaPredicted RBP3.84□□□□□ -1.79
CHD9-213ENST00000564845 PTPDC1A2A3K4 754 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 PLEKHA8P1O95397 391 aa3.84□□□□□ -1.79
CHD9-213ENST00000564845 TFRCP02786 760 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms