RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 CNTNAP1P78357 1384 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 USP17L12C9JPN9 530 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 USP17L21D6R901 530 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 EPS15P42566 896 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 USP5P45974 858 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 TDO2P48775 406 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 RABEP1Q15276 862 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 AKNAD1Q5T1N1 836 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 C16orf86Q6ZW13 317 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 PNMA8AQ86V59 439 aaPredicted RBP8.89□□□□□ -0.99
GINS3-205ENST00000564814 FOXP4Q8IVH2 680 aaPredicted RBP8.89□□□□□ -0.99
GINS3-205ENST00000564814 AMOTL1Q8IY63 956 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 RASEFQ8IZ41 740 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 TDRD3Q9H7E2 651 aaKnown RBP8.89□□□□□ -0.99
GINS3-205ENST00000564814 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 PI4KBQ9UBF8 816 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 SWAP70Q9UH65 585 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 HERC5Q9UII4 1024 aaKnown RBP8.89□□□□□ -0.99
GINS3-205ENST00000564814 PALD1Q9ULE6 856 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 GJA3Q9Y6H8 435 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 PAPPA2Q9BXP8 1791 aa8.89□□□□□ -0.99
GINS3-205ENST00000564814 TNRC18O15417 2968 aaPredicted RBP8.88□□□□□ -0.99
GINS3-205ENST00000564814 EGFRP00533 1210 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 HLA-DOAP06340 250 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 SLC3A2P08195 630 aaKnown RBP8.88□□□□□ -0.99
GINS3-205ENST00000564814 EPHX2P34913 555 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 NOVP48745 357 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 TNNI2P48788 182 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 RBM5P52756 815 aaKnown RBP eCLIP8.88□□□□□ -0.99
GINS3-205ENST00000564814 HIRAP54198 1017 aaPredicted RBP8.88□□□□□ -0.99
GINS3-205ENST00000564814 NFIAQ12857 509 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 NBPF9Q3BBW0 867 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 TRPM4Q8TD43 1214 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 SNX21Q969T3 373 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 HOOK2Q96ED9 719 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 TEPSINQ96N21 525 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 TTC14Q96N46 770 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 TAF1DQ9H5J8 278 aaPredicted RBP8.88□□□□□ -0.99
GINS3-205ENST00000564814 GINM1Q9NU53 330 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 MCM9Q9NXL9 1143 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 PCDHAC2Q9Y5I4 1007 aa8.88□□□□□ -0.99
GINS3-205ENST00000564814 POLR2AP24928 1970 aaKnown RBP8.87□□□□□ -0.99
GINS3-205ENST00000564814 SHTN1A0MZ66 631 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 E7EWF7 191 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 APPP05067 770 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 POTEJP0CG39 1038 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 MCM2P49736 904 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 RCAN1P53805 252 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 EVCP57679 992 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 EXOSC10Q01780 885 aaKnown RBP8.87□□□□□ -0.99
GINS3-205ENST00000564814 PDE4BQ07343 736 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 TATDN1Q6P1N9 297 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 STOX1Q6ZVD7 989 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 SH3BP5LQ7L8J4 393 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 SAMD7Q7Z3H4 446 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 TBC1D10CQ8IV04 446 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 MAPKAPK5Q8IW41 473 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 MB21D2Q8IYB1 491 aaPredicted RBP8.87□□□□□ -0.99
GINS3-205ENST00000564814 NCOA7Q8NI08 942 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 CCDC17Q96LX7 622 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 NEK1Q96PY6 1258 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 KRT23Q9C075 422 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 TSHZ2Q9NRE2 1034 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 TCP11L1Q9NUJ3 509 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 SERPINB13Q9UIV8 391 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 SYNPO2Q9UMS6 1093 aa8.87□□□□□ -0.99
GINS3-205ENST00000564814 DDTLA6NHG4 134 aaPredicted RBP8.86□□□□□ -0.99
GINS3-205ENST00000564814 UNCXA6NJT0 531 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 LIFRP42702 1097 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 PLCD1P51178 756 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 TRDNQ13061 729 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 ADCK5Q3MIX3 580 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 TBC1D10BQ4KMP7 808 aaPredicted RBP8.86□□□□□ -0.99
GINS3-205ENST00000564814 CCDC178Q5BJE1 867 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 PPP4R3BQ5MIZ7 849 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 SAMD1Q6SPF0 538 aaPredicted RBP8.86□□□□□ -0.99
GINS3-205ENST00000564814 MFSD6Q6ZSS7 791 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 RUFY3Q7L099 469 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 DHX32Q7L7V1 743 aaKnown RBP8.86□□□□□ -0.99
GINS3-205ENST00000564814 TMEM87BQ96K49 555 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 TAF6LQ9Y6J9 622 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 NID2Q14112 1375 aa8.86□□□□□ -0.99
GINS3-205ENST00000564814 CLRN2A0PK11 232 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 MYCNP04198 464 aaPredicted RBP8.85□□□□□ -0.99
GINS3-205ENST00000564814 POLR3DP05423 398 aaPredicted RBP8.85□□□□□ -0.99
GINS3-205ENST00000564814 RASA1P20936 1047 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 RPS6KB1P23443 525 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 MCM5P33992 734 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 RASA3Q14644 834 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 CHADLQ6NUI6 762 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 BLOC1S2Q6QNY1 142 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 SGMS1Q86VZ5 419 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 ANKS1AQ92625 1134 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 ESR2Q92731 530 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 DEFB129Q9H1M3 183 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 DNAJC18Q9H819 358 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 GGA3Q9NZ52 723 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 ZNF112Q9UJU3 913 aa8.85□□□□□ -0.99
GINS3-205ENST00000564814 CYP46A1Q9Y6A2 500 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms