RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 C11orf57Q6ZUT1 292 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-249ENST00000564606 TMC6Q7Z403 805 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 VPS37DQ86XT2 251 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 NOSTRINQ8IVI9 506 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 ZNF592Q92610 1267 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 ESR2Q92731 530 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 FERMT2Q96AC1 680 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 DCBLD2Q96PD2 775 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 UBAC1Q9BSL1 405 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 NCOA5Q9HCD5 579 aaKnown RBP8.75□□□□□ -1.01
ATXN3-249ENST00000564606 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
ATXN3-249ENST00000564606 NUP188Q5SRE5 1749 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 RGPD5Q99666 1765 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 A0A1B0GVL5 298 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 AP5Z1O43299 807 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 STX10O60499 249 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 POLR3DP05423 398 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-249ENST00000564606 FDPSP14324 419 aaKnown RBP8.74□□□□□ -1.01
ATXN3-249ENST00000564606 TXLNAP40222 546 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 PPP1R2P41236 205 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 TDO2P48775 406 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 DMTNQ08495 405 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 RTN1Q16799 776 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 KRBA2Q6ZNG9 492 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 NLRP10Q86W26 655 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 IQCA1Q86XH1 822 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 CERS3Q8IU89 383 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 TTLL11Q8NHH1 800 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 ENOX1Q8TC92 643 aaKnown RBP8.74□□□□□ -1.01
ATXN3-249ENST00000564606 STAG1Q8WVM7 1258 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 UBXN4Q92575 508 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 CCDC51Q96ER9 411 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 RNF26Q9BY78 433 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-249ENST00000564606 GOLPH3LQ9H4A5 285 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 RMND1Q9NWS8 449 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 IFNKQ9P0W0 207 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 KCNH3Q9ULD8 1083 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 HPSEQ9Y251 543 aa8.74□□□□□ -1.01
ATXN3-249ENST00000564606 COL5A2P05997 1499 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-249ENST00000564606 EXOC5O00471 708 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 PDE6AP16499 860 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 HMGB2P26583 209 aaKnown RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 TRAPPC10P48553 1259 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 ETF1P62495 437 aaKnown RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 GUCY1B3Q02153 619 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 RBM26Q5T8P6 1007 aaKnown RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 PPFIBP1Q86W92 1011 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 AMOTL1Q8IY63 956 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 SPATA5Q8NB90 893 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 TMC2Q8TDI7 906 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 JARID2Q92833 1246 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 CCDC47Q96A33 483 aaKnown RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 PKNOX2Q96KN3 472 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 XPO4Q9C0E2 1151 aaKnown RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 PUS7LQ9H0K6 701 aaKnown RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 ACBD3Q9H3P7 528 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 DNAI1Q9UI46 699 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 ZNF330Q9Y3S2 320 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 CLIC4Q9Y696 253 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 TAF6LQ9Y6J9 622 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-249ENST00000564606 MYH15Q9Y2K3 1946 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 ZNF532Q9HCE3 1301 aa8.73□□□□□ -1.01
ATXN3-249ENST00000564606 LRP6O75581 1613 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 EFCAB8A8MWE9 144 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 MMP1P03956 469 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 MYL1P05976 194 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 MCM3P25205 808 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 CALML3P27482 149 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 HAND2P61296 217 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 CCZ1BP86790 482 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 CCZ1P86791 482 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-249ENST00000564606 NCBP1Q09161 790 aaKnown RBP8.72□□□□□ -1.01
ATXN3-249ENST00000564606 LRMPQ12912 555 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 POSTNQ15063 836 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 CAVIN4Q5BKX8 364 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 AXDND1Q5T1B0 1012 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-249ENST00000564606 TMCO3Q6UWJ1 677 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 BRINP3Q76B58 766 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 CATIPQ7Z7H3 387 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 DZIP3Q86Y13 1208 aaKnown RBP8.72□□□□□ -1.01
ATXN3-249ENST00000564606 IFNL3Q8IZI9 196 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-249ENST00000564606 IQCDQ96DY2 449 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 FAM89AQ96GI7 184 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 ZNF594Q96JF6 807 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-249ENST00000564606 GSDMAQ96QA5 445 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 STRBPQ96SI9 672 aaKnown RBP8.72□□□□□ -1.01
ATXN3-249ENST00000564606 UTP14AQ9BVJ6 771 aaKnown RBP8.72□□□□□ -1.01
ATXN3-249ENST00000564606 GBP3Q9H0R5 595 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 L2HGDHQ9H9P8 463 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 SLAIN2Q9P270 581 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 NRBP1Q9UHY1 535 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
ATXN3-249ENST00000564606 SRPRBQ9Y5M8 271 aaKnown RBP8.72□□□□□ -1.01
ATXN3-249ENST00000564606 TRIM75PA6NK02 468 aa8.71□□□□□ -1.02
ATXN3-249ENST00000564606 ERLIN1O75477 346 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms