RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 DNAJC14Q6Y2X3 702 aaPredicted RBP5.7□□□□□ -1.5
CHD9-211ENST00000564600 FBF1Q8TES7 1133 aa5.7□□□□□ -1.5
CHD9-211ENST00000564600 FAM84AQ96KN4 292 aa5.7□□□□□ -1.5
CHD9-211ENST00000564600 ATXN3LQ9H3M9 355 aa5.7□□□□□ -1.5
CHD9-211ENST00000564600 SSU72Q9NP77 194 aaKnown RBP5.7□□□□□ -1.5
CHD9-211ENST00000564600 TMEM39AQ9NV64 488 aa5.7□□□□□ -1.5
CHD9-211ENST00000564600 ZP2Q05996 745 aa5.69□□□□□ -1.5
CHD9-211ENST00000564600 ALG1LQ6GMV1 187 aa5.69□□□□□ -1.5
CHD9-211ENST00000564600 SULF2Q8IWU5 870 aa5.69□□□□□ -1.5
CHD9-211ENST00000564600 LRRC56Q8IYG6 542 aaPredicted RBP5.69□□□□□ -1.5
CHD9-211ENST00000564600 GRIN3AQ8TCU5 1115 aa5.69□□□□□ -1.5
CHD9-211ENST00000564600 DDX54Q8TDD1 881 aaKnown RBP5.69□□□□□ -1.5
CHD9-211ENST00000564600 NECAB3Q96P71 396 aaPredicted RBP5.69□□□□□ -1.5
CHD9-211ENST00000564600 CELA3AP09093 270 aa5.68□□□□□ -1.5
CHD9-211ENST00000564600 XRCC5P13010 732 aaKnown RBP5.68□□□□□ -1.5
CHD9-211ENST00000564600 BMP6P22004 513 aa5.68□□□□□ -1.5
CHD9-211ENST00000564600 RAP1GAPP47736 663 aa5.68□□□□□ -1.5
CHD9-211ENST00000564600 TAGLNQ01995 201 aaKnown RBP5.68□□□□□ -1.5
CHD9-211ENST00000564600 KIF4BQ2VIQ3 1234 aa5.68□□□□□ -1.5
CHD9-211ENST00000564600 SLC23A3Q6PIS1 610 aa5.68□□□□□ -1.5
CHD9-211ENST00000564600 SYDE1Q6ZW31 735 aaPredicted RBP5.68□□□□□ -1.5
CHD9-211ENST00000564600 ZFYVE1Q9HBF4 777 aa5.68□□□□□ -1.5
CHD9-211ENST00000564600 PPP4R2Q9NY27 417 aa5.68□□□□□ -1.5
CHD9-211ENST00000564600 LMCD1Q9NZU5 365 aa5.68□□□□□ -1.5
CHD9-211ENST00000564600 CTNND2Q9UQB3 1225 aa5.68□□□□□ -1.5
CHD9-211ENST00000564600 TMEM265A0A087WTH1 108 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 PATL2C9JE40 543 aaKnown RBP5.67□□□□□ -1.5
CHD9-211ENST00000564600 SLFN14P0C7P3 912 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 GSTT1P30711 240 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 BUD31P41223 144 aaPredicted RBP5.67□□□□□ -1.5
CHD9-211ENST00000564600 ZNF252P-AS1Q0IIN9 211 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 MAP1SQ66K74 1059 aaPredicted RBP5.67□□□□□ -1.5
CHD9-211ENST00000564600 NPAS4Q8IUM7 802 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.67□□□□□ -1.5
CHD9-211ENST00000564600 SPACA3Q8IXA5 215 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 FLAD1Q8NFF5 587 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 DIRC2Q96SL1 478 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 C12orf49Q9H741 205 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 PCOLCE2Q9UKZ9 415 aa5.67□□□□□ -1.5
CHD9-211ENST00000564600 EIF4EBP3O60516 100 aaPredicted RBP5.66□□□□□ -1.5
CHD9-211ENST00000564600 USP17L7P0C7H9 530 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 C1QTNF9P0C862 333 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 NME2P22392 152 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 ARNTP27540 789 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 ATP2B2Q01814 1243 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 PPP2R3AQ06190 1150 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 NKPD1Q17RQ9 610 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 PPM1JQ5JR12 505 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 LILRA6Q6PI73 481 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 FAM214BQ7L5A3 538 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 GPBAR1Q8TDU6 330 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 DUSP9Q99956 384 aaKnown RBP5.66□□□□□ -1.5
CHD9-211ENST00000564600 CACNA2D2Q9NY47 1150 aa5.66□□□□□ -1.5
CHD9-211ENST00000564600 KRT1P04264 644 aa5.65□□□□□ -1.5
CHD9-211ENST00000564600 ZSCAN22P10073 491 aaPredicted RBP5.65□□□□□ -1.5
CHD9-211ENST00000564600 PTPN11Q06124 597 aaPredicted RBP5.65□□□□□ -1.5
CHD9-211ENST00000564600 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
CHD9-211ENST00000564600 MPZL3Q6UWV2 235 aa5.65□□□□□ -1.5
CHD9-211ENST00000564600 FAM161BQ96MY7 647 aa5.65□□□□□ -1.5
CHD9-211ENST00000564600 SRCIN1Q9C0H9 1055 aa5.65□□□□□ -1.5
CHD9-211ENST00000564600 TNKS2Q9H2K2 1166 aa5.65□□□□□ -1.5
CHD9-211ENST00000564600 CARS2Q9HA77 564 aaKnown RBP5.65□□□□□ -1.5
CHD9-211ENST00000564600 CBX8Q9HC52 389 aa5.65□□□□□ -1.5
CHD9-211ENST00000564600 KRT82Q9NSB4 513 aa5.65□□□□□ -1.5
CHD9-211ENST00000564600 SPG7Q9UQ90 795 aa5.65□□□□□ -1.5
CHD9-211ENST00000564600 SYNGAP1Q96PV0 1343 aa5.65□□□□□ -1.51
CHD9-211ENST00000564600 DCDC2CA8MYV0 355 aa5.64□□□□□ -1.51
CHD9-211ENST00000564600 PRPF40AO75400 957 aaKnown RBP5.64□□□□□ -1.51
CHD9-211ENST00000564600 GNA15P30679 374 aa5.64□□□□□ -1.51
CHD9-211ENST00000564600 ZC3H12AQ5D1E8 599 aaKnown RBP5.64□□□□□ -1.51
CHD9-211ENST00000564600 TOX2Q96NM4 488 aa5.64□□□□□ -1.51
CHD9-211ENST00000564600 GZF1Q9H116 711 aaPredicted RBP5.64□□□□□ -1.51
CHD9-211ENST00000564600 FAM8A1Q9UBU6 413 aa5.64□□□□□ -1.51
CHD9-211ENST00000564600 CNTNAP4Q9C0A0 1308 aa5.64□□□□□ -1.51
CHD9-211ENST00000564600 PRR33A8MZF0 331 aa5.63□□□□□ -1.51
CHD9-211ENST00000564600 GIPC1O14908 333 aa5.63□□□□□ -1.51
CHD9-211ENST00000564600 EAPPQ56P03 285 aaPredicted RBP5.63□□□□□ -1.51
CHD9-211ENST00000564600 FBXO33Q7Z6M2 555 aa5.63□□□□□ -1.51
CHD9-211ENST00000564600 MKNK2Q9HBH9 465 aa5.63□□□□□ -1.51
CHD9-211ENST00000564600 ATP13A1Q9HD20 1204 aa5.63□□□□□ -1.51
CHD9-211ENST00000564600 C19orf73Q9NVV2 129 aa5.63□□□□□ -1.51
CHD9-211ENST00000564600 PPM1HQ9ULR3 514 aa5.63□□□□□ -1.51
CHD9-211ENST00000564600 TSPAN15O95858 294 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 CTSHP09668 335 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 NTF4P34130 210 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 CDK8P49336 464 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 MEI1Q5TIA1 1274 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 PCNX4Q63HM2 1172 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.62□□□□□ -1.51
CHD9-211ENST00000564600 C12orf40Q86WS4 652 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 ANKRD24Q8TF21 1146 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 KIRREL1Q96J84 757 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 NSUN3Q9H649 340 aaKnown RBP5.62□□□□□ -1.51
CHD9-211ENST00000564600 PARP2Q9UGN5 583 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 AK5Q9Y6K8 562 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 NCANO14594 1321 aa5.62□□□□□ -1.51
CHD9-211ENST00000564600 B8ZZF3 427 aa5.61□□□□□ -1.51
CHD9-211ENST00000564600 NPIPB6E9PJ23 425 aa5.61□□□□□ -1.51
CHD9-211ENST00000564600 PRRG2O14669 202 aa5.61□□□□□ -1.51
CHD9-211ENST00000564600 CDKAL1Q5VV42 579 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms