RNA–Protein interactions for RNA: ENST00000564544.1

COX4I1-206, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 3

Gene COX4I1, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-206ENST00000564544 NOB1Q9ULX3 412 aaKnown RBP16.75■□□□□ 0.27
COX4I1-206ENST00000564544 MGAMO43451 1857 aa16.75■□□□□ 0.27
COX4I1-206ENST00000564544 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
COX4I1-206ENST00000564544 GORABQ5T7V8 394 aa16.74■□□□□ 0.27
COX4I1-206ENST00000564544 NOL10Q9BSC4 688 aaKnown RBP16.74■□□□□ 0.27
COX4I1-206ENST00000564544 HMX1Q9NP08 348 aaPredicted RBP16.74■□□□□ 0.27
COX4I1-206ENST00000564544 HERC5Q9UII4 1024 aaKnown RBP16.74■□□□□ 0.27
COX4I1-206ENST00000564544 MYH2Q9UKX2 1941 aa16.74■□□□□ 0.27
COX4I1-206ENST00000564544 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
COX4I1-206ENST00000564544 SRGAP3O43295 1099 aa16.73■□□□□ 0.27
COX4I1-206ENST00000564544 CAP2P40123 477 aa16.73■□□□□ 0.27
COX4I1-206ENST00000564544 TFCP2Q12800 502 aa16.73■□□□□ 0.27
COX4I1-206ENST00000564544 MTX1Q13505 466 aa16.73■□□□□ 0.27
COX4I1-206ENST00000564544 CCDC84Q86UT8 332 aaPredicted RBP16.73■□□□□ 0.27
COX4I1-206ENST00000564544 SPATA5Q8NB90 893 aa16.73■□□□□ 0.27
COX4I1-206ENST00000564544 NEUROD6Q96NK8 337 aa16.73■□□□□ 0.27
COX4I1-206ENST00000564544 RPTORQ8N122 1335 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 BMP8BP34820 402 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 HMGCS2P54868 508 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 SH3D19Q5HYK7 790 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 SLC17A8Q8NDX2 589 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 MEIS3Q99687 375 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
COX4I1-206ENST00000564544 DHX36Q9H2U1 1008 aaKnown RBP16.72■□□□□ 0.27
COX4I1-206ENST00000564544 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 HMG20BQ9P0W2 317 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.72■□□□□ 0.27
COX4I1-206ENST00000564544 MORF4L1Q9UBU8 362 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 STAP2Q9UGK3 403 aa16.72■□□□□ 0.27
COX4I1-206ENST00000564544 FAM196BA6NMK8 535 aa16.71■□□□□ 0.27
COX4I1-206ENST00000564544 SLURP2P0DP57 97 aa16.71■□□□□ 0.27
COX4I1-206ENST00000564544 IRX3P78415 501 aaPredicted RBP16.71■□□□□ 0.27
COX4I1-206ENST00000564544 GPR153Q6NV75 609 aa16.71■□□□□ 0.27
COX4I1-206ENST00000564544 TEX11Q8IYF3 940 aa16.71■□□□□ 0.27
COX4I1-206ENST00000564544 TRMT44Q8IYL2 757 aaKnown RBP16.71■□□□□ 0.27
COX4I1-206ENST00000564544 TRMT2AQ8IZ69 625 aaKnown RBP16.71■□□□□ 0.27
COX4I1-206ENST00000564544 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.27
COX4I1-206ENST00000564544 NSUN4Q96CB9 384 aaKnown RBP16.71■□□□□ 0.27
COX4I1-206ENST00000564544 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
COX4I1-206ENST00000564544 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
COX4I1-206ENST00000564544 PI4KBQ9UBF8 816 aa16.71■□□□□ 0.27
COX4I1-206ENST00000564544 GJD2Q9UKL4 321 aa16.71■□□□□ 0.27
COX4I1-206ENST00000564544 BAG3O95817 575 aa16.7■□□□□ 0.26
COX4I1-206ENST00000564544 ASNSP08243 561 aa16.7■□□□□ 0.26
COX4I1-206ENST00000564544 UQCRFS1P1P0C7P4 283 aa16.7■□□□□ 0.26
COX4I1-206ENST00000564544 PLCG2P16885 1265 aa16.7■□□□□ 0.26
COX4I1-206ENST00000564544 ZNF384Q8TF68 577 aa16.7■□□□□ 0.26
COX4I1-206ENST00000564544 SOCS4Q8WXH5 440 aa16.7■□□□□ 0.26
COX4I1-206ENST00000564544 CDCA7LQ96GN5 454 aa16.7■□□□□ 0.26
COX4I1-206ENST00000564544 GINM1Q9NU53 330 aa16.7■□□□□ 0.26
COX4I1-206ENST00000564544 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
COX4I1-206ENST00000564544 PTPRFP10586 1907 aa16.69■□□□□ 0.26
COX4I1-206ENST00000564544 IGSF3O75054 1194 aa16.69■□□□□ 0.26
COX4I1-206ENST00000564544 ARID4AP29374 1257 aaPredicted RBP16.69■□□□□ 0.26
COX4I1-206ENST00000564544 C7orf61Q8IZ16 206 aa16.69■□□□□ 0.26
COX4I1-206ENST00000564544 DIS3LQ8TF46 1054 aaKnown RBP16.69■□□□□ 0.26
COX4I1-206ENST00000564544 GDF15Q99988 308 aa16.69■□□□□ 0.26
COX4I1-206ENST00000564544 RANBP2P49792 3224 aaKnown RBP16.68■□□□□ 0.26
COX4I1-206ENST00000564544 C19orf81C9J6K1 198 aa16.68■□□□□ 0.26
COX4I1-206ENST00000564544 XRCC5P13010 732 aaKnown RBP16.68■□□□□ 0.26
COX4I1-206ENST00000564544 HOXA7P31268 230 aaPredicted RBP16.68■□□□□ 0.26
COX4I1-206ENST00000564544 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.261e-8■□□□□ 9.8
COX4I1-206ENST00000564544 GPRC5AQ8NFJ5 357 aa16.68■□□□□ 0.26
COX4I1-206ENST00000564544 GTF3C2Q8WUA4 911 aaPredicted RBP16.68■□□□□ 0.26
COX4I1-206ENST00000564544 NUDT12Q9BQG2 462 aa16.68■□□□□ 0.26
COX4I1-206ENST00000564544 C11orf49Q9H6J7 331 aa16.68■□□□□ 0.26
COX4I1-206ENST00000564544 PHIPQ8WWQ0 1821 aa16.68■□□□□ 0.26
COX4I1-206ENST00000564544 DLL1O00548 723 aa16.67■□□□□ 0.26
COX4I1-206ENST00000564544 SOX1O00570 391 aaPredicted RBP16.67■□□□□ 0.26
COX4I1-206ENST00000564544 MAPK4P31152 587 aa16.67■□□□□ 0.26
COX4I1-206ENST00000564544 BACE1P56817 501 aa16.67■□□□□ 0.26
COX4I1-206ENST00000564544 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
COX4I1-206ENST00000564544 TBC1D9Q6ZT07 1266 aa16.67■□□□□ 0.26
COX4I1-206ENST00000564544 FOXP4Q8IVH2 680 aaPredicted RBP16.67■□□□□ 0.26
COX4I1-206ENST00000564544 CCAR1Q8IX12 1150 aaKnown RBP16.67■□□□□ 0.26
COX4I1-206ENST00000564544 TRIM34Q9BYJ4 488 aa16.67■□□□□ 0.26
COX4I1-206ENST00000564544 OGDHLQ9ULD0 1010 aa16.67■□□□□ 0.26
COX4I1-206ENST00000564544 IPO8O15397 1037 aaKnown RBP16.66■□□□□ 0.26
COX4I1-206ENST00000564544 GNAI2P04899 355 aa16.66■□□□□ 0.26
COX4I1-206ENST00000564544 MTMR2Q13614 643 aa16.66■□□□□ 0.26
COX4I1-206ENST00000564544 MAP3K21Q5TCX8 1036 aa16.66■□□□□ 0.26
COX4I1-206ENST00000564544 NAA16Q6N069 864 aaPredicted RBP16.66■□□□□ 0.26
COX4I1-206ENST00000564544 PI16Q6UXB8 463 aa16.66■□□□□ 0.26
COX4I1-206ENST00000564544 ATF7IPQ6VMQ6 1270 aa16.66■□□□□ 0.26
COX4I1-206ENST00000564544 CRACR2BQ8N4Y2 399 aaPredicted RBP16.66■□□□□ 0.26
COX4I1-206ENST00000564544 SH3RF3Q8TEJ3 882 aaPredicted RBP16.66■□□□□ 0.26
COX4I1-206ENST00000564544 TRIB2Q92519 343 aa16.66■□□□□ 0.26
COX4I1-206ENST00000564544 LRCH3Q96II8 777 aa16.66■□□□□ 0.26
COX4I1-206ENST00000564544 ZMYND8Q9ULU4 1186 aaPredicted RBP16.66■□□□□ 0.26
COX4I1-206ENST00000564544 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
COX4I1-206ENST00000564544 USP17L10C9JJH3 530 aa16.65■□□□□ 0.26
COX4I1-206ENST00000564544 PRKAR2AP13861 404 aaKnown RBP16.65■□□□□ 0.26
COX4I1-206ENST00000564544 CYP2B6P20813 491 aa16.65■□□□□ 0.26
COX4I1-206ENST00000564544 MCAMP43121 646 aa16.65■□□□□ 0.26
COX4I1-206ENST00000564544 RARSP54136 660 aaKnown RBP16.65■□□□□ 0.26
COX4I1-206ENST00000564544 PPP4CP60510 307 aa16.65■□□□□ 0.26
COX4I1-206ENST00000564544 HERVK_113P62684 666 aa16.65■□□□□ 0.26
COX4I1-206ENST00000564544 RRP1BQ14684 758 aaKnown RBP16.65■□□□□ 0.26
COX4I1-206ENST00000564544 LRIT3Q3SXY7 679 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms