RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.52
SPG7-210ENST00000564409 PANK1Q8TE04 598 aa18.33■□□□□ 0.52
SPG7-210ENST00000564409 SH3RF3Q8TEJ3 882 aaPredicted RBP18.33■□□□□ 0.52
SPG7-210ENST00000564409 EAF2Q96CJ1 260 aaPredicted RBP18.33■□□□□ 0.52
SPG7-210ENST00000564409 ARHGAP39Q9C0H5 1083 aa18.33■□□□□ 0.52
SPG7-210ENST00000564409 GINM1Q9NU53 330 aa18.33■□□□□ 0.52
SPG7-210ENST00000564409 SRRDQ9UH36 339 aa18.33■□□□□ 0.52
SPG7-210ENST00000564409 DDX19BQ9UMR2 479 aa18.33■□□□□ 0.52
SPG7-210ENST00000564409 HMMRO75330 724 aa18.32■□□□□ 0.52
SPG7-210ENST00000564409 CAP2P40123 477 aa18.32■□□□□ 0.52
SPG7-210ENST00000564409 ZAP70P43403 619 aa18.32■□□□□ 0.52
SPG7-210ENST00000564409 GADL1Q6ZQY3 521 aa18.32■□□□□ 0.52
SPG7-210ENST00000564409 FOXP4Q8IVH2 680 aaPredicted RBP18.32■□□□□ 0.52
SPG7-210ENST00000564409 PROCA1Q8NCQ7 364 aaPredicted RBP18.32■□□□□ 0.52
SPG7-210ENST00000564409 AATFQ9NY61 560 aaKnown RBP eCLIP18.32■□□□□ 0.52
SPG7-210ENST00000564409 AGTPBP1Q9UPW5 1226 aa18.32■□□□□ 0.52
SPG7-210ENST00000564409 ZSWIM8A7E2V4 1837 aa18.31■□□□□ 0.52
SPG7-210ENST00000564409 POTEFA5A3E0 1075 aa18.31■□□□□ 0.52
SPG7-210ENST00000564409 FMNL1O95466 1100 aaPredicted RBP18.31■□□□□ 0.52
SPG7-210ENST00000564409 METTL16Q86W50 562 aaKnown RBP18.31■□□□□ 0.52
SPG7-210ENST00000564409 ZNF280CQ8ND82 737 aa18.31■□□□□ 0.52
SPG7-210ENST00000564409 TRIM47Q96LD4 638 aa18.31■□□□□ 0.52
SPG7-210ENST00000564409 CCDC8Q9H0W5 538 aaPredicted RBP18.31■□□□□ 0.52
SPG7-210ENST00000564409 AS3MTQ9HBK9 375 aa18.31■□□□□ 0.52
SPG7-210ENST00000564409 PNMA3Q9UL41 463 aa18.31■□□□□ 0.52
SPG7-210ENST00000564409 TRIM75PA6NK02 468 aa18.3■□□□□ 0.52
SPG7-210ENST00000564409 USP17L5A8MUK1 530 aa18.3■□□□□ 0.52
SPG7-210ENST00000564409 FCGRTP55899 365 aa18.3■□□□□ 0.52
SPG7-210ENST00000564409 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.52
SPG7-210ENST00000564409 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
SPG7-210ENST00000564409 LOC285556D6RIA3 1793 aa18.3■□□□□ 0.52
SPG7-210ENST00000564409 FLT1P17948 1338 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 ASNSP08243 561 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 CYP2C8P10632 490 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 OSBPP22059 807 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 CYP7A1P22680 504 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 MAP3K12Q12852 859 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 TTF1Q15361 905 aaPredicted RBP18.29■□□□□ 0.52
SPG7-210ENST00000564409 AACSQ86V21 672 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 RAET1EQ8TD07 263 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 SMCR8Q8TEV9 937 aaPredicted RBP18.29■□□□□ 0.52
SPG7-210ENST00000564409 TGFBRAP1Q8WUH2 860 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 TLR7Q9NYK1 1049 aaKnown RBP18.29■□□□□ 0.52
SPG7-210ENST00000564409 EXOC6BQ9Y2D4 811 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 MYH1P12882 1939 aa18.29■□□□□ 0.52
SPG7-210ENST00000564409 SIPA1L1O43166 1804 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 FAM196BA6NMK8 535 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 IDH1O75874 414 aaKnown RBP18.28■□□□□ 0.52
SPG7-210ENST00000564409 HLA-DOAP06340 250 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 SPP2Q13103 211 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 SLC4A8Q2Y0W8 1093 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 ADGRA1Q86SQ6 560 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 CLASRPQ8N2M8 674 aaKnown RBP18.28■□□□□ 0.52
SPG7-210ENST00000564409 RHPN1Q8TCX5 695 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 KIF1BPQ96EK5 621 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 WDR18Q9BV38 432 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 TRIM34Q9BYJ4 488 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
SPG7-210ENST00000564409 MYPNQ86TC9 1320 aa18.27■□□□□ 0.52
SPG7-210ENST00000564409 RAB11FIP3O75154 756 aa18.27■□□□□ 0.52
SPG7-210ENST00000564409 SLURP2P0DP57 97 aa18.27■□□□□ 0.52
SPG7-210ENST00000564409 CTGFP29279 349 aa18.27■□□□□ 0.52
SPG7-210ENST00000564409 GRK4P32298 578 aa18.27■□□□□ 0.52
SPG7-210ENST00000564409 GCLCP48506 637 aaPredicted RBP18.27■□□□□ 0.52
SPG7-210ENST00000564409 SH3D19Q5HYK7 790 aa18.27■□□□□ 0.52
SPG7-210ENST00000564409 MAPKAPK5Q8IW41 473 aa18.27■□□□□ 0.52
SPG7-210ENST00000564409 CRACR2BQ8N4Y2 399 aaPredicted RBP18.27■□□□□ 0.52
SPG7-210ENST00000564409 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.52
SPG7-210ENST00000564409 EN2P19622 333 aaPredicted RBP18.26■□□□□ 0.51
SPG7-210ENST00000564409 SH3TC2Q8TF17 1288 aa18.26■□□□□ 0.51
SPG7-210ENST00000564409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.26■□□□□ 0.51
SPG7-210ENST00000564409 C19orf81C9J6K1 198 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 CAPN2P17655 700 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 FAM110CQ1W6H9 321 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 SLAIN1Q8ND83 568 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 NKX2-3Q8TAU0 364 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 GCC1Q96CN9 775 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.25■□□□□ 0.51
SPG7-210ENST00000564409 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 CENPFP49454 3210 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 DOCK3Q8IZD9 2030 aa18.25■□□□□ 0.51
SPG7-210ENST00000564409 IFIT2P09913 472 aaKnown RBP18.24■□□□□ 0.51
SPG7-210ENST00000564409 HMGCS2P54868 508 aa18.24■□□□□ 0.51
SPG7-210ENST00000564409 BACE1P56817 501 aa18.24■□□□□ 0.51
SPG7-210ENST00000564409 UBXN2AP68543 259 aa18.24■□□□□ 0.51
SPG7-210ENST00000564409 PDE3AQ14432 1141 aa18.24■□□□□ 0.51
SPG7-210ENST00000564409 RRP1BQ14684 758 aaKnown RBP18.24■□□□□ 0.51
SPG7-210ENST00000564409 TREML2Q5T2D2 321 aa18.24■□□□□ 0.51
SPG7-210ENST00000564409 EHD4Q9H223 541 aa18.24■□□□□ 0.51
SPG7-210ENST00000564409 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
SPG7-210ENST00000564409 TNPO2O14787 897 aaKnown RBP18.23■□□□□ 0.51
SPG7-210ENST00000564409 USP5P45974 858 aa18.23■□□□□ 0.51
SPG7-210ENST00000564409 DYNLL1P63167 89 aaKnown RBP18.23■□□□□ 0.51
SPG7-210ENST00000564409 PRKCZQ05513 592 aa18.23■□□□□ 0.51
SPG7-210ENST00000564409 IRF5Q13568 498 aa18.23■□□□□ 0.51
SPG7-210ENST00000564409 TTC6Q86TZ1 520 aa18.23■□□□□ 0.51
SPG7-210ENST00000564409 CCDC84Q86UT8 332 aaPredicted RBP18.23■□□□□ 0.51
SPG7-210ENST00000564409 PXYLP1Q8TE99 480 aa18.23■□□□□ 0.51
SPG7-210ENST00000564409 COA7Q96BR5 231 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms