RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.3■■□□□ 1.48
SHCBP1-203ENST00000564272 SAP30BPQ9UHR5 308 aaKnown RBP24.3■■□□□ 1.48
SHCBP1-203ENST00000564272 AFG3L2Q9Y4W6 797 aa24.3■■□□□ 1.48
SHCBP1-203ENST00000564272 PTPRFP10586 1907 aa24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 PDHXO00330 501 aa24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 GOLIM4O00461 696 aa24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 SMARCA5O60264 1052 aaPredicted RBP24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 TLR2O60603 784 aa24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 RRP1P56182 461 aaKnown RBP24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 SOX10P56693 466 aa24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 RRP1BQ14684 758 aaKnown RBP24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 TTF1Q15361 905 aaPredicted RBP24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 EDC3Q96F86 508 aaKnown RBP24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 LRRCC1Q9C099 1032 aa24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 DHX36Q9H2U1 1008 aaKnown RBP24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 PI4KBQ9UBF8 816 aa24.29■■□□□ 1.48
SHCBP1-203ENST00000564272 ZSWIM8A7E2V4 1837 aa24.28■■□□□ 1.48
SHCBP1-203ENST00000564272 A0A0G2JLL6 359 aaPredicted RBP24.28■■□□□ 1.48
SHCBP1-203ENST00000564272 SLC4A8Q2Y0W8 1093 aa24.28■■□□□ 1.48
SHCBP1-203ENST00000564272 PRRT2Q7Z6L0 340 aaPredicted RBP24.28■■□□□ 1.48
SHCBP1-203ENST00000564272 HERC5Q9UII4 1024 aaKnown RBP24.28■■□□□ 1.48
SHCBP1-203ENST00000564272 PALD1Q9ULE6 856 aa24.28■■□□□ 1.48
SHCBP1-203ENST00000564272 TRIM75PA6NK02 468 aa24.27■■□□□ 1.48
SHCBP1-203ENST00000564272 PDE6AP16499 860 aa24.27■■□□□ 1.48
SHCBP1-203ENST00000564272 GPAT2Q6NUI2 795 aa24.27■■□□□ 1.48
SHCBP1-203ENST00000564272 BOLA2Q9H3K6 86 aa24.27■■□□□ 1.48
SHCBP1-203ENST00000564272 DNAJC18Q9H819 358 aa24.27■■□□□ 1.48
SHCBP1-203ENST00000564272 EFCC1Q9HA90 598 aa24.27■■□□□ 1.48
SHCBP1-203ENST00000564272 MYH1P12882 1939 aa24.26■■□□□ 1.47
SHCBP1-203ENST00000564272 GADL1Q6ZQY3 521 aa24.26■■□□□ 1.47
SHCBP1-203ENST00000564272 ADGRA2Q96PE1 1338 aa24.26■■□□□ 1.47
SHCBP1-203ENST00000564272 CAP2P40123 477 aa24.25■■□□□ 1.47
SHCBP1-203ENST00000564272 USP5P45974 858 aa24.25■■□□□ 1.47
SHCBP1-203ENST00000564272 SLC9C2Q5TAH2 1124 aa24.25■■□□□ 1.47
SHCBP1-203ENST00000564272 TMED8Q6PL24 325 aaPredicted RBP24.25■■□□□ 1.47
SHCBP1-203ENST00000564272 CERS3Q8IU89 383 aa24.25■■□□□ 1.47
SHCBP1-203ENST00000564272 ARHGAP39Q9C0H5 1083 aa24.25■■□□□ 1.47
SHCBP1-203ENST00000564272 CPA4Q9UI42 421 aa24.25■■□□□ 1.47
SHCBP1-203ENST00000564272 ATP5JP18859 108 aa24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 RGS19P49795 217 aa24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 FASTKD5Q7L8L6 764 aaKnown RBP24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 CRACR2BQ8N4Y2 399 aaPredicted RBP24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 RIOK1Q9BRS2 568 aaKnown RBP24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 TRIM34Q9BYJ4 488 aa24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 PAG1Q9NWQ8 432 aa24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 PTPN22Q9Y2R2 807 aa24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 ZNF532Q9HCE3 1301 aa24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 DDX60LQ5H9U9 1706 aaKnown RBP24.24■■□□□ 1.47
SHCBP1-203ENST00000564272 MAGEB6P1A0A0J9YX57 407 aa24.23■■□□□ 1.47
SHCBP1-203ENST00000564272 HLA-DOAP06340 250 aa24.23■■□□□ 1.47
SHCBP1-203ENST00000564272 CYP2C8P10632 490 aa24.23■■□□□ 1.47
SHCBP1-203ENST00000564272 C17orf99Q6UX52 265 aa24.23■■□□□ 1.47
SHCBP1-203ENST00000564272 METTL16Q86W50 562 aaKnown RBP24.23■■□□□ 1.47
SHCBP1-203ENST00000564272 PARK7Q99497 189 aaKnown RBP24.23■■□□□ 1.47
SHCBP1-203ENST00000564272 DCTPP1Q9H773 170 aa24.23■■□□□ 1.47
SHCBP1-203ENST00000564272 PCDHB15Q9Y5E8 787 aa24.23■■□□□ 1.47
SHCBP1-203ENST00000564272 NAV1Q8NEY1 1877 aa24.23■■□□□ 1.47
SHCBP1-203ENST00000564272 TCRBV5S4A2TA0A5A2 114 aa24.22■■□□□ 1.47
SHCBP1-203ENST00000564272 ECM2O94769 699 aaPredicted RBP24.22■■□□□ 1.47
SHCBP1-203ENST00000564272 JAG1P78504 1218 aa24.22■■□□□ 1.47
SHCBP1-203ENST00000564272 LACTBP83111 547 aaPredicted RBP24.22■■□□□ 1.47
SHCBP1-203ENST00000564272 SHROOM1Q2M3G4 852 aaPredicted RBP24.22■■□□□ 1.47
SHCBP1-203ENST00000564272 HAUS7Q99871 368 aa24.22■■□□□ 1.47
SHCBP1-203ENST00000564272 LOC285556D6RIA3 1793 aa24.21■■□□□ 1.47
SHCBP1-203ENST00000564272 GDF11O95390 407 aa24.21■■□□□ 1.47
SHCBP1-203ENST00000564272 SPP2Q13103 211 aa24.21■■□□□ 1.47
SHCBP1-203ENST00000564272 SLFNL1Q499Z3 407 aa24.21■■□□□ 1.47
SHCBP1-203ENST00000564272 FOXP4Q8IVH2 680 aaPredicted RBP24.21■■□□□ 1.47
SHCBP1-203ENST00000564272 HTTP42858 3142 aa24.21■■□□□ 1.47
SHCBP1-203ENST00000564272 MLLT1Q03111 559 aaPredicted RBP24.2■■□□□ 1.46
SHCBP1-203ENST00000564272 ZNF280CQ8ND82 737 aa24.2■■□□□ 1.46
SHCBP1-203ENST00000564272 CRBNQ96SW2 442 aa24.2■■□□□ 1.46
SHCBP1-203ENST00000564272 USP17L5A8MUK1 530 aa24.19■■□□□ 1.46
SHCBP1-203ENST00000564272 KIF22Q14807 665 aa24.19■■□□□ 1.46
SHCBP1-203ENST00000564272 TREML2Q5T2D2 321 aa24.19■■□□□ 1.46
SHCBP1-203ENST00000564272 LCORLQ8N3X6 602 aa24.19■■□□□ 1.46
SHCBP1-203ENST00000564272 AGTPBP1Q9UPW5 1226 aa24.19■■□□□ 1.46
SHCBP1-203ENST00000564272 MYH7P12883 1935 aa24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 CHGBP05060 677 aa24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 CTGFP29279 349 aa24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 ADD2P35612 726 aa24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 HMGCS2P54868 508 aa24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 ARHGEF6Q15052 776 aa24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 TBC1D2Q9BYX2 928 aa24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 CRNKL1Q9BZJ0 848 aaKnown RBP24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 SLC45A1Q9Y2W3 748 aa24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 PTCH2Q9Y6C5 1203 aa24.18■■□□□ 1.46
SHCBP1-203ENST00000564272 ASNSP08243 561 aa24.17■■□□□ 1.46
SHCBP1-203ENST00000564272 TSHZ3Q63HK5 1081 aa24.17■■□□□ 1.46
SHCBP1-203ENST00000564272 AS3MTQ9HBK9 375 aa24.17■■□□□ 1.46
SHCBP1-203ENST00000564272 ECHDC1Q9NTX5 307 aa24.17■■□□□ 1.46
SHCBP1-203ENST00000564272 ZBTB21Q9ULJ3 1066 aa24.17■■□□□ 1.46
SHCBP1-203ENST00000564272 BCRP11274 1271 aa24.16■■□□□ 1.46
SHCBP1-203ENST00000564272 PROCA1Q8NCQ7 364 aaPredicted RBP24.16■■□□□ 1.46
SHCBP1-203ENST00000564272 SDR42E1Q8WUS8 393 aa24.16■■□□□ 1.46
SHCBP1-203ENST00000564272 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.16■■□□□ 1.46
SHCBP1-203ENST00000564272 EHD4Q9H223 541 aa24.16■■□□□ 1.46
SHCBP1-203ENST00000564272 ARMT1Q9H993 441 aa24.16■■□□□ 1.46
SHCBP1-203ENST00000564272 SERPINB13Q9UIV8 391 aa24.16■■□□□ 1.46
SHCBP1-203ENST00000564272 MBD4O95243 580 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms