RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 TFIP11Q9UBB9 837 aaKnown RBP12.73□□□□□ -0.37
TCF4-222ENST00000564228 LCMT1Q9UIC8 334 aa12.73□□□□□ -0.37
TCF4-222ENST00000564228 SASH3O75995 380 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
TCF4-222ENST00000564228 TTC31Q49AM3 519 aaPredicted RBP12.72□□□□□ -0.37
TCF4-222ENST00000564228 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
TCF4-222ENST00000564228 CWC27Q6UX04 472 aaKnown RBP12.72□□□□□ -0.37
TCF4-222ENST00000564228 FCHSD1Q86WN1 690 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 ARFGAP3Q9NP61 516 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 MINPP1Q9UNW1 487 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 AKAP11Q9UKA4 1901 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 SLC5A1P13866 664 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 PDE6BP35913 854 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 ATL3Q6DD88 541 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 ARMCX5Q6P1M9 558 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 NDUFB9Q9Y6M9 179 aa12.72□□□□□ -0.37
TCF4-222ENST00000564228 MYH13Q9UKX3 1938 aa12.71□□□□□ -0.37
TCF4-222ENST00000564228 SEC31AO94979 1220 aaKnown RBP12.71□□□□□ -0.37
TCF4-222ENST00000564228 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
TCF4-222ENST00000564228 ATP5JP18859 108 aa12.71□□□□□ -0.37
TCF4-222ENST00000564228 EVCP57679 992 aa12.71□□□□□ -0.37
TCF4-222ENST00000564228 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
TCF4-222ENST00000564228 LEKR1Q6ZMV7 388 aa12.71□□□□□ -0.37
TCF4-222ENST00000564228 SLC51AQ86UW1 340 aa12.71□□□□□ -0.37
TCF4-222ENST00000564228 LPIN2Q92539 896 aa12.71□□□□□ -0.37
TCF4-222ENST00000564228 ADAM21Q9UKJ8 722 aa12.71□□□□□ -0.37
TCF4-222ENST00000564228 MYO5AQ9Y4I1 1855 aaKnown RBP12.71□□□□□ -0.38
TCF4-222ENST00000564228 KLRG2A4D1S0 409 aaPredicted RBP12.7□□□□□ -0.38
TCF4-222ENST00000564228 FGFR2P21802 821 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 PTH1RQ03431 593 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 AXDND1Q5T1B0 1012 aaPredicted RBP12.7□□□□□ -0.38
TCF4-222ENST00000564228 TRIM65Q6PJ69 517 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 CCDC73Q6ZRK6 1079 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 HOMER1Q86YM7 354 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 AOPEPQ8N6M6 819 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 RABGGTAQ92696 567 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 FUT8Q9BYC5 575 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 SNRKQ9NRH2 765 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 RCOR1Q9UKL0 485 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 JRKLQ9Y4A0 524 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 WTIPA6NIX2 430 aaPredicted RBP12.7□□□□□ -0.38
TCF4-222ENST00000564228 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
TCF4-222ENST00000564228 SMC2O95347 1197 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
TCF4-222ENST00000564228 SRGNP10124 158 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 CREB3L3Q68CJ9 461 aa12.7□□□□□ -0.38
TCF4-222ENST00000564228 RSRC2Q7L4I2 434 aaKnown RBP12.7□□□□□ -0.38
TCF4-222ENST00000564228 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
TCF4-222ENST00000564228 MKRN1Q9UHC7 482 aaKnown RBP12.7□□□□□ -0.38
TCF4-222ENST00000564228 MYH7P12883 1935 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 GOLGA6L9A6NEM1 432 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 HIP1O00291 1037 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 MAP2K7O14733 419 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 HOXA10P31260 410 aaPredicted RBP12.69□□□□□ -0.38
TCF4-222ENST00000564228 LMAN1P49257 510 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 PSEN1P49768 467 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 FAM160A1Q05DH4 1040 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 BRD3Q15059 726 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 SUGP1Q8IWZ8 645 aaKnown RBP12.69□□□□□ -0.38
TCF4-222ENST00000564228 PPM1EQ8WY54 764 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 CARD6Q9BX69 1037 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 ANKIB1Q9P2G1 1089 aa12.69□□□□□ -0.38
TCF4-222ENST00000564228 CCDC151A5D8V7 595 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 ZSCAN12O43309 604 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 CPP00450 1065 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 NPR1P16066 1061 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 RPS6KB1P23443 525 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 PHKA1P46020 1223 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 CCDC102BQ68D86 513 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 BLOC1S2Q6QNY1 142 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 TMC6Q7Z403 805 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 C2CD5Q86YS7 1000 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 CCAR1Q8IX12 1150 aaKnown RBP12.68□□□□□ -0.38
TCF4-222ENST00000564228 ENGASEQ8NFI3 743 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 SECISBP2LQ93073 1101 aaKnown RBP12.68□□□□□ -0.38
TCF4-222ENST00000564228 ZNF622Q969S3 477 aaKnown RBP eCLIP12.68□□□□□ -0.38
TCF4-222ENST00000564228 EVI5LQ96CN4 794 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 CRAMP1Q96RY5 1269 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 HAUS7Q99871 368 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 ANKRD2Q9GZV1 360 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 ZCCHC17Q9NP64 241 aaKnown RBP12.68□□□□□ -0.38
TCF4-222ENST00000564228 RBM8AQ9Y5S9 174 aaKnown RBP12.68□□□□□ -0.38
TCF4-222ENST00000564228 SLX4Q8IY92 1834 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 URI1O94763 535 aaPredicted RBP12.68□□□□□ -0.38
TCF4-222ENST00000564228 FKBP4Q02790 459 aaKnown RBP eCLIP12.68□□□□□ -0.38
TCF4-222ENST00000564228 HNRNPLLQ8WVV9 542 aaKnown RBP12.68□□□□□ -0.38
TCF4-222ENST00000564228 MAP4K1Q92918 833 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 MASTLQ96GX5 879 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 FSD1Q9BTV5 496 aa12.68□□□□□ -0.38
TCF4-222ENST00000564228 XPO4Q9C0E2 1151 aaKnown RBP12.68□□□□□ -0.38
TCF4-222ENST00000564228 LRRC37AA6NMS7 1700 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
TCF4-222ENST00000564228 H0YIN7 160 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 GOLIM4O00461 696 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
TCF4-222ENST00000564228 CLGNO14967 610 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 BBOX1O75936 387 aa12.67□□□□□ -0.38
TCF4-222ENST00000564228 CHRNA5P30532 468 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms