RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SUCLG2Q96I99 432 aa19.91■□□□□ 0.78
RNF40-205ENST00000563909 SPINK5Q9NQ38 1064 aaPredicted RBP19.91■□□□□ 0.78
RNF40-205ENST00000563909 PLXNB2O15031 1838 aa19.9■□□□□ 0.78
RNF40-205ENST00000563909 PHIPQ8WWQ0 1821 aa19.9■□□□□ 0.78
RNF40-205ENST00000563909 TMEM265A0A087WTH1 108 aa19.9■□□□□ 0.78
RNF40-205ENST00000563909 DDTLA6NHG4 134 aaPredicted RBP19.9■□□□□ 0.78
RNF40-205ENST00000563909 PRDX5P30044 214 aa19.9■□□□□ 0.78
RNF40-205ENST00000563909 ATN1P54259 1190 aaPredicted RBP19.9■□□□□ 0.78
RNF40-205ENST00000563909 C9orf50Q5SZB4 431 aa19.9■□□□□ 0.78
RNF40-205ENST00000563909 TRMT44Q8IYL2 757 aaKnown RBP19.9■□□□□ 0.78
RNF40-205ENST00000563909 SALL2Q9Y467 1007 aaPredicted RBP19.9■□□□□ 0.78
RNF40-205ENST00000563909 DOCK2Q92608 1830 aa19.9■□□□□ 0.78
RNF40-205ENST00000563909 BDP1A6H8Y1 2624 aa19.89■□□□□ 0.77
RNF40-205ENST00000563909 LDHBP07195 334 aaKnown RBP19.89■□□□□ 0.77
RNF40-205ENST00000563909 HMGCS2P54868 508 aa19.89■□□□□ 0.77
RNF40-205ENST00000563909 SMAD3P84022 425 aaKnown RBP19.89■□□□□ 0.77
RNF40-205ENST00000563909 DOCK1Q14185 1865 aa19.89■□□□□ 0.77
RNF40-205ENST00000563909 PUM3Q15397 648 aaKnown RBP19.89■□□□□ 0.77
RNF40-205ENST00000563909 SOCS4Q8WXH5 440 aa19.89■□□□□ 0.77
RNF40-205ENST00000563909 KIF16BQ96L93 1317 aa19.89■□□□□ 0.77
RNF40-205ENST00000563909 IDI2Q9BXS1 227 aa19.89■□□□□ 0.77
RNF40-205ENST00000563909 MORF4L1Q9UBU8 362 aa19.89■□□□□ 0.77
RNF40-205ENST00000563909 IL16Q14005 1332 aa19.88■□□□□ 0.77
RNF40-205ENST00000563909 ZNF280CQ8ND82 737 aa19.88■□□□□ 0.77
RNF40-205ENST00000563909 PEX10O60683 326 aa19.87■□□□□ 0.77
RNF40-205ENST00000563909 PDE3AQ14432 1141 aa19.87■□□□□ 0.77
RNF40-205ENST00000563909 CCL14Q16627 93 aa19.87■□□□□ 0.77
RNF40-205ENST00000563909 USP38Q8NB14 1042 aa19.87■□□□□ 0.77
RNF40-205ENST00000563909 ALDH1L1O75891 902 aa19.86■□□□□ 0.77
RNF40-205ENST00000563909 FGFR2P21802 821 aa19.86■□□□□ 0.77
RNF40-205ENST00000563909 WDR63Q8IWG1 891 aa19.86■□□□□ 0.77
RNF40-205ENST00000563909 GPRC5AQ8NFJ5 357 aa19.86■□□□□ 0.77
RNF40-205ENST00000563909 KLHDC4Q8TBB5 520 aa19.86■□□□□ 0.77
RNF40-205ENST00000563909 BICC1Q9H694 974 aaKnown RBP19.86■□□□□ 0.77
RNF40-205ENST00000563909 FANCIQ9NVI1 1328 aa19.85■□□□□ 0.77
RNF40-205ENST00000563909 VAMP4O75379 141 aa19.85■□□□□ 0.77
RNF40-205ENST00000563909 NBPF7P0C2Y1 421 aaPredicted RBP19.85■□□□□ 0.77
RNF40-205ENST00000563909 RTP1P59025 263 aa19.85■□□□□ 0.77
RNF40-205ENST00000563909 PICALMQ13492 652 aa19.85■□□□□ 0.77
RNF40-205ENST00000563909 SLC4A10Q6U841 1118 aa19.85■□□□□ 0.77
RNF40-205ENST00000563909 USP6NLQ92738 828 aa19.85■□□□□ 0.77
RNF40-205ENST00000563909 SRCIN1Q9C0H9 1055 aa19.85■□□□□ 0.77
RNF40-205ENST00000563909 ATP11BQ9Y2G3 1177 aa19.85■□□□□ 0.77
RNF40-205ENST00000563909 FAM196BA6NMK8 535 aa19.84■□□□□ 0.77
RNF40-205ENST00000563909 SLC5A1P13866 664 aa19.84■□□□□ 0.77
RNF40-205ENST00000563909 RGS2P41220 211 aa19.84■□□□□ 0.77
RNF40-205ENST00000563909 IRX3P78415 501 aaPredicted RBP19.84■□□□□ 0.77
RNF40-205ENST00000563909 MAP3K12Q12852 859 aa19.84■□□□□ 0.77
RNF40-205ENST00000563909 CCAR1Q8IX12 1150 aaKnown RBP19.84■□□□□ 0.77
RNF40-205ENST00000563909 BADQ92934 168 aa19.84■□□□□ 0.77
RNF40-205ENST00000563909 P2RX7Q99572 595 aaKnown RBP19.84■□□□□ 0.77
RNF40-205ENST00000563909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.84■□□□□ 0.77
RNF40-205ENST00000563909 DDX4Q9NQI0 724 aaKnown RBP19.84■□□□□ 0.77
RNF40-205ENST00000563909 MAST2Q6P0Q8 1798 aa19.84■□□□□ 0.77
RNF40-205ENST00000563909 LOC285556D6RIA3 1793 aa19.83■□□□□ 0.77
RNF40-205ENST00000563909 MAPK4P31152 587 aa19.83■□□□□ 0.77
RNF40-205ENST00000563909 RABL6Q3YEC7 729 aaPredicted RBP19.83■□□□□ 0.77
RNF40-205ENST00000563909 TXNRD2Q9NNW7 524 aa19.83■□□□□ 0.77
RNF40-205ENST00000563909 PRDM5Q9NQX1 630 aaPredicted RBP19.83■□□□□ 0.77
RNF40-205ENST00000563909 CACNA1FO60840 1977 aa19.83■□□□□ 0.76
RNF40-205ENST00000563909 RFX7Q2KHR2 1363 aa19.83■□□□□ 0.76
RNF40-205ENST00000563909 LTBP2Q14767 1821 aa19.82■□□□□ 0.76
RNF40-205ENST00000563909 TBC1D12O60347 775 aa19.82■□□□□ 0.76
RNF40-205ENST00000563909 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
RNF40-205ENST00000563909 GRIN2CQ14957 1233 aa19.82■□□□□ 0.76
RNF40-205ENST00000563909 MORN1Q5T089 497 aa19.82■□□□□ 0.76
RNF40-205ENST00000563909 LPIN2Q92539 896 aa19.82■□□□□ 0.76
RNF40-205ENST00000563909 TBC1D2Q9BYX2 928 aa19.82■□□□□ 0.76
RNF40-205ENST00000563909 OSBPL5Q9H0X9 879 aaPredicted RBP19.82■□□□□ 0.76
RNF40-205ENST00000563909 MYH13Q9UKX3 1938 aa19.81■□□□□ 0.76
RNF40-205ENST00000563909 EXOSC9Q06265 439 aaKnown RBP19.81■□□□□ 0.76
RNF40-205ENST00000563909 SH3D19Q5HYK7 790 aa19.81■□□□□ 0.76
RNF40-205ENST00000563909 ANKRD44Q8N8A2 993 aa19.81■□□□□ 0.76
RNF40-205ENST00000563909 APBA2Q99767 749 aa19.81■□□□□ 0.76
RNF40-205ENST00000563909 GNL3LQ9NVN8 582 aaKnown RBP19.81■□□□□ 0.76
RNF40-205ENST00000563909 USP17L5A8MUK1 530 aa19.8■□□□□ 0.76
RNF40-205ENST00000563909 DNM1LO00429 736 aa19.8■□□□□ 0.76
RNF40-205ENST00000563909 CNGA1P29973 690 aa19.8■□□□□ 0.76
RNF40-205ENST00000563909 HERVK_113P62684 666 aa19.8■□□□□ 0.76
RNF40-205ENST00000563909 HNRNPUQ00839 825 aaKnown RBP eCLIP19.8■□□□□ 0.76
RNF40-205ENST00000563909 GPR142Q7Z601 462 aa19.8■□□□□ 0.76
RNF40-205ENST00000563909 PLEKHH3Q7Z736 793 aa19.8■□□□□ 0.76
RNF40-205ENST00000563909 LPAR1Q92633 364 aa19.8■□□□□ 0.76
RNF40-205ENST00000563909 PORCNQ9H237 461 aa19.8■□□□□ 0.76
RNF40-205ENST00000563909 RBPJLQ9UBG7 517 aa19.8■□□□□ 0.76
RNF40-205ENST00000563909 DDX20Q9UHI6 824 aaKnown RBP19.8■□□□□ 0.76
RNF40-205ENST00000563909 GAKO14976 1311 aa19.79■□□□□ 0.76
RNF40-205ENST00000563909 ZNF521Q96K83 1311 aa19.79■□□□□ 0.76
RNF40-205ENST00000563909 SALL1Q9NSC2 1324 aa19.79■□□□□ 0.76
RNF40-205ENST00000563909 Q3C1V9 767 aa19.79■□□□□ 0.76
RNF40-205ENST00000563909 MFSD14CQ5VZR4 134 aa19.79■□□□□ 0.76
RNF40-205ENST00000563909 ADAMTS19Q8TE59 1207 aa19.79■□□□□ 0.76
RNF40-205ENST00000563909 CWC22Q9HCG8 908 aaKnown RBP19.79■□□□□ 0.76
RNF40-205ENST00000563909 UTYO14607 1347 aa19.78■□□□□ 0.76
RNF40-205ENST00000563909 HOXA7P31268 230 aaPredicted RBP19.78■□□□□ 0.76
RNF40-205ENST00000563909 CAP2P40123 477 aa19.78■□□□□ 0.76
RNF40-205ENST00000563909 ERVK-9P63128 1117 aa19.78■□□□□ 0.76
RNF40-205ENST00000563909 ERVK-24P63145 666 aa19.78■□□□□ 0.76
RNF40-205ENST00000563909 MTMR2Q13614 643 aa19.78■□□□□ 0.76
RNF40-205ENST00000563909 SLC39A5Q6ZMH5 540 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms