RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CCDC102BQ68D86 513 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 TPTE2Q6XPS3 522 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 SIX5Q8N196 739 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 ANKRD44Q8N8A2 993 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 EXOC6Q8TAG9 804 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 CNKSR1Q969H4 720 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 KIFC2Q96AC6 838 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 TRIM47Q96LD4 638 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 PLA2G12BQ9BX93 195 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 SPON1Q9HCB6 807 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 ZBTB40Q9NUA8 1239 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 C9orf78Q9NZ63 289 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 DDX19BQ9UMR2 479 aa6.51□□□□□ -1.37
HERPUD1-207ENST00000563781 GOLGB1Q14789 3259 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 TNRC6CQ9HCJ0 1690 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 CARNS1A5YM72 827 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 MEN1O00255 615 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 GNAI3P08754 354 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 UBTFL1P0CB47 393 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 POLD1P28340 1107 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 RNF144AP50876 292 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 CTSWP56202 376 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 ST5P78524 1137 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 FOXO4P98177 505 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 RABL6Q3YEC7 729 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 DNAJC14Q6Y2X3 702 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 TPCN2Q8NHX9 752 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 NLRP3Q96P20 1036 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 BRIP1Q9BX63 1249 aa6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 POLMQ9NP87 494 aaPredicted RBP6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 LRRFIP2Q9Y608 721 aaKnown RBP6.5□□□□□ -1.37
HERPUD1-207ENST00000563781 RTL9Q8NET4 1388 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 TTLL8A6PVC2 850 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L15C9J2P7 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L10C9JJH3 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L13C9JLJ4 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L12C9JPN9 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L11C9JVI0 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L21D6R901 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L18D6R9N7 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L22D6RA61 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L17D6RBQ6 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L19D6RCP7 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L20D6RJB6 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 PDE8AO60658 829 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 GNAI2P04899 355 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 CSF1RP07333 972 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 GPC1P35052 558 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 CENPCQ03188 943 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 USP17L24Q0WX57 530 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 SF3B3Q15393 1217 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 CRY2Q49AN0 593 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 TTLL11Q8NHH1 800 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 ZNF594Q96JF6 807 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 GRIP2Q9C0E4 1043 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 BICC1Q9H694 974 aaKnown RBP6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 KIAA1522Q9P206 1035 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 COL4A1P02462 1669 aa6.49□□□□□ -1.37
HERPUD1-207ENST00000563781 AFDNP55196 1824 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 DDX60Q8IY21 1712 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 FIGNL2A6NMB9 653 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 SRGNP10124 158 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 SNRPBP14678 240 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 KCNA3P22001 575 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 GTF2E1P29083 439 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 CHRNA5P30532 468 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 RFX5P48382 616 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 MTX1Q13505 466 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 CEP85Q6P2H3 762 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 LMBR1LQ6UX01 489 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 ANKMY2Q8IV38 441 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 SIRT2Q8IXJ6 389 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 RNF217Q8TC41 542 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 FHDC1Q9C0D6 1143 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 GREM2Q9H772 168 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 ZNF358Q9NW07 568 aa6.48□□□□□ -1.37
HERPUD1-207ENST00000563781 ANKRD31Q8N7Z5 1873 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 LAMB2P55268 1798 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 PNMA6EA0A0J9YXQ4 647 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 SFI1A8K8P3 1242 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 BACH1O14867 736 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 NPHP1O15259 732 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 HOXA10P31260 410 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 PDE6BP35913 854 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 SMTNP53814 917 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 SEC13P55735 322 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 DPYDQ12882 1025 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 ZNF787Q6DD87 383 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 SLC51AQ86UW1 340 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 C2CD5Q86YS7 1000 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 NLGN2Q8NFZ4 835 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 SEC31BQ9NQW1 1179 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 SERTAD1Q9UHV2 236 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 DNMT3LQ9UJW3 386 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 CD2APQ9Y5K6 639 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 COL11A2P13942 1736 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 KIAA1551Q9HCM1 1747 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 LRP5O75197 1615 aa6.47□□□□□ -1.37
HERPUD1-207ENST00000563781 A0A0G2JLW4 131 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms