RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ASIC4Q96FT7 647 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 DUSP23Q9BVJ7 150 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 MKNK2Q9HBH9 465 aa5.45□□□□□ -1.54
SHCBP1-202ENST00000563219 USP31Q70CQ4 1352 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 LEFTY1O75610 366 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 BNIP3Q12983 259 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 MPRIPQ6WCQ1 1025 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 FAM181AQ8N9Y4 354 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 BACH2Q9BYV9 841 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 CEP44Q9C0F1 390 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 CBX8Q9HC52 389 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 SSU72Q9NP77 194 aaKnown RBP5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 VAV3Q9UKW4 847 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 SAMM50Q9Y512 469 aa5.44□□□□□ -1.54
SHCBP1-202ENST00000563219 ENC1O14682 589 aa5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 PRKCQQ04759 706 aa5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 PLCL1Q15111 1095 aa5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 TAF1CQ15572 869 aaPredicted RBP5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 TPTE2Q6XPS3 522 aa5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 ZNF574Q6ZN55 896 aaPredicted RBP5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 GRIN3AQ8TCU5 1115 aa5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 U3KQE9 123 aa5.43□□□□□ -1.54
SHCBP1-202ENST00000563219 BTBD11A6QL63 1104 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 E9PSI1 815 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 PAGE1O75459 146 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 TRIM37O94972 964 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 OXCT1P55809 520 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 RING1Q06587 406 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 IFI16Q16666 785 aaKnown RBP5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 ZNF792Q3KQV3 632 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 MEI1Q5TIA1 1274 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 SCARA3Q6AZY7 606 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 SV2BQ7L1I2 683 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 ACSBG1Q96GR2 724 aa5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 NOC4LQ9BVI4 516 aaKnown RBP5.42□□□□□ -1.54
SHCBP1-202ENST00000563219 CD8BP10966 210 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 FUT4P22083 530 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 LRRC14Q15048 493 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 TSNAXIP1Q2TAA8 658 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 OGFOD2Q6N063 350 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 FAM214BQ7L5A3 538 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 TOP6BLQ8N6T0 577 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 TMEM87AQ8NBN3 555 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 HEXIM2Q96MH2 286 aaKnown RBP5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 METTL5Q9NRN9 209 aaKnown RBP5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 IGSF5Q9NSI5 407 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 TTF2Q9UNY4 1162 aaKnown RBP5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 PLAGL2Q9UPG8 496 aa5.41□□□□□ -1.54
SHCBP1-202ENST00000563219 TMEM265A0A087WTH1 108 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 SCAMP3O14828 347 aaKnown RBP5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 FANCGO15287 622 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 PAPLNO95428 1278 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 CEACAM5P06731 702 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 NTF4P34130 210 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 FANCCQ00597 558 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 AOC3Q16853 763 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 PPM1JQ5JR12 505 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 LLGL2Q6P1M3 1020 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 ARHGAP27Q6ZUM4 889 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 C12orf40Q86WS4 652 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 CYP8B1Q9UNU6 501 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 CSADQ9Y600 493 aa5.4□□□□□ -1.54
SHCBP1-202ENST00000563219 DCDC2CA8MYV0 355 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 IGF2BP3O00425 579 aaKnown RBP eCLIP5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 BIN1O00499 593 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 FBXO24O75426 580 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 CCDC85BQ15834 202 aaPredicted RBP5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 ZBTB37Q5TC79 503 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 RASIP1Q5U651 963 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 POU5F2Q8N7G0 328 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 HRASLS5Q96KN8 279 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 TNKS2Q9H2K2 1166 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 PRDM10Q9NQV6 1147 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 MBNL3Q9NUK0 354 aaKnown RBP5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 GTF2IRD1Q9UHL9 959 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 PCDHA4Q9UN74 947 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 SNX11Q9Y5W9 270 aa5.39□□□□□ -1.55
SHCBP1-202ENST00000563219 RNASE1P07998 156 aaKnown RBP5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 CELA3AP09093 270 aa5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 RLBP1P12271 317 aa5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 ZNF76P36508 570 aa5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 CD96P40200 585 aa5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 CDC37L1Q7L3B6 337 aa5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 ERMP1Q7Z2K6 904 aa5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 ATG4DQ86TL0 474 aaPredicted RBP5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 PI4K2BQ8TCG2 481 aa5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 RSRP1Q9BUV0 290 aa5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 PICK1Q9NRD5 415 aa5.38□□□□□ -1.55
SHCBP1-202ENST00000563219 TCF3P15923 654 aa5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 ITIH2P19823 946 aa5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 RPS26P62854 115 aaKnown RBP5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 PCNX4Q63HM2 1172 aa5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 UBE3DQ7Z6J8 389 aa5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 METTL16Q86W50 562 aaKnown RBP5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 KCT2Q8NC54 265 aa5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 ZNF507Q8TCN5 953 aa5.37□□□□□ -1.55
SHCBP1-202ENST00000563219 RNF34Q969K3 372 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms