RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 BAG3O95817 575 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 SLC4A8Q2Y0W8 1093 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 OTUD7BQ6GQQ9 843 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 GPAT2Q6NUI2 795 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 CRBNQ96SW2 442 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 NOL10Q9BSC4 688 aaKnown RBP13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 LRRCC1Q9C099 1032 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 DCTPP1Q9H773 170 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 SAP30BPQ9UHR5 308 aaKnown RBP13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 PALD1Q9ULE6 856 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 AFG3L2Q9Y4W6 797 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 ZHX2Q9Y6X8 837 aa13.51□□□□□ -0.25
LPCAT4-202ENST00000562404 LOC285556D6RIA3 1793 aa13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 TCRBV5S4A2TA0A5A2 114 aa13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 CTNND1O60716 968 aaKnown RBP13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 PDE6AP16499 860 aa13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 EVX2Q03828 476 aa13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 MAP3K12Q12852 859 aa13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 OTOP1Q7RTM1 612 aa13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 RIOK1Q9BRS2 568 aaKnown RBP13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 MGAMO43451 1857 aa13.5□□□□□ -0.25
LPCAT4-202ENST00000562404 ADGRA2Q96PE1 1338 aa13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 IGSF3O75054 1194 aa13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 PLCG2P16885 1265 aa13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 ATP5JP18859 108 aa13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 SP3Q02447 781 aa13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 SLC9C2Q5TAH2 1124 aa13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 METTL16Q86W50 562 aaKnown RBP13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 ZFYVE28Q9HCC9 887 aa13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 TRIM17Q9Y577 477 aa13.49□□□□□ -0.25
LPCAT4-202ENST00000562404 BRCA2P51587 3418 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 ZNF532Q9HCE3 1301 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 DOCK3Q8IZD9 2030 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 A0A0G2JLL6 359 aaPredicted RBP13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 PDHXO00330 501 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 CXCL11O14625 94 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 TLR2O60603 784 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 CTGFP29279 349 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 CAP2P40123 477 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 PRRT2Q7Z6L0 340 aaPredicted RBP13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 HAUS7Q99871 368 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 PICK1Q9NRD5 415 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 PAG1Q9NWQ8 432 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 PI4KBQ9UBF8 816 aa13.48□□□□□ -0.25
LPCAT4-202ENST00000562404 TRIM75PA6NK02 468 aa13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 TTF1Q15361 905 aaPredicted RBP13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 FBXO46Q6PJ61 603 aaPredicted RBP13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 C17orf99Q6UX52 265 aa13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 LCORLQ8N3X6 602 aa13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 DHX36Q9H2U1 1008 aaKnown RBP13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 ZCCHC17Q9NP64 241 aaKnown RBP13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 CPA4Q9UI42 421 aa13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 HERC5Q9UII4 1024 aaKnown RBP13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 MYH8P13535 1937 aa13.47□□□□□ -0.25
LPCAT4-202ENST00000562404 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 GDF11O95390 407 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 CYP2C8P10632 490 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 ADD2P35612 726 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 USP5P45974 858 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 PLCD1P51178 756 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 SOX10P56693 466 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 PKN2Q16513 984 aaKnown RBP13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 TREML2Q5T2D2 321 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 GADL1Q6ZQY3 521 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 ERO1AQ96HE7 468 aa13.46□□□□□ -0.25
LPCAT4-202ENST00000562404 TNRC18O15417 2968 aaPredicted RBP13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 MAGEB6P1A0A0J9YX57 407 aa13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 PRKAB2O43741 272 aa13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 RGS19P49795 217 aa13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 SPP2Q13103 211 aa13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 FOXP4Q8IVH2 680 aaPredicted RBP13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 SDR42E1Q8WUS8 393 aa13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 EFCC1Q9HA90 598 aa13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 PTPN22Q9Y2R2 807 aa13.45□□□□□ -0.26
LPCAT4-202ENST00000562404 CYP2D6P10635 497 aa13.44□□□□□ -0.26
LPCAT4-202ENST00000562404 LACTBP83111 547 aaPredicted RBP13.44□□□□□ -0.26
LPCAT4-202ENST00000562404 ZNF280CQ8ND82 737 aa13.44□□□□□ -0.26
LPCAT4-202ENST00000562404 ECHDC1Q9NTX5 307 aa13.44□□□□□ -0.26
LPCAT4-202ENST00000562404 USP17L5A8MUK1 530 aa13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 BCRP11274 1271 aa13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 HMGCS2P54868 508 aa13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 TATDN1Q6P1N9 297 aa13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 TMED8Q6PL24 325 aaPredicted RBP13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 FASTKD5Q7L8L6 764 aaKnown RBP13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 CERS3Q8IU89 383 aa13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 CRACR2BQ8N4Y2 399 aaPredicted RBP13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 PUS7LQ9H0K6 701 aaKnown RBP13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 DCP1AQ9NPI6 582 aaPredicted RBP13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 ZBTB21Q9ULJ3 1066 aa13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 KIAA0100Q14667 2235 aaKnown RBP13.43□□□□□ -0.26
LPCAT4-202ENST00000562404 SALL3Q9BXA9 1300 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms