RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 R3HDM1Q15032 1099 aaKnown RBP11.15□□□□□ -0.62
CDH13-205ENST00000562307 NTRK3Q16288 839 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 APOBEC3HQ6NTF7 200 aaKnown RBP11.15□□□□□ -0.62
CDH13-205ENST00000562307 SYNE3Q6ZMZ3 975 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 NFXL1Q6ZNB6 911 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 IQCA1Q86XH1 822 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 MAPKAPK5Q8IW41 473 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 FAM184AQ8NB25 1140 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 TMEM87AQ8NBN3 555 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 ANKS1AQ92625 1134 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 FBXW7Q969H0 707 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 TEKT1Q969V4 418 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 DDX11Q96FC9 970 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 ZDHHC15Q96MV8 337 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 MXD3Q9BW11 206 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 NAP1L2Q9ULW6 460 aaPredicted RBP11.15□□□□□ -0.62
CDH13-205ENST00000562307 CD2APQ9Y5K6 639 aa11.15□□□□□ -0.62
CDH13-205ENST00000562307 TNKSO95271 1327 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 FLT1P17948 1338 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 VPS37CA5D8V6 355 aaPredicted RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 GOLGA8AA7E2F4 631 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 YDJCA8MPS7 323 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 CPLX1O14810 134 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 PPIP5K2O43314 1243 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 RANBP6O60518 1105 aaKnown RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 WDHD1O75717 1129 aaPredicted RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 CDKL5O76039 1030 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 POLR3DP05423 398 aaPredicted RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 CDC27P30260 824 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 ADD1P35611 737 aaKnown RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 CRKP46108 304 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 PLCD1P51178 756 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 CCDC178Q5BJE1 867 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 CPLX2Q6PUV4 134 aaKnown RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 C16orf86Q6ZW13 317 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 ENAHQ8N8S7 591 aaPredicted RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 ZKSCAN3Q9BRR0 538 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 ZSCAN16Q9H4T2 348 aaPredicted RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 TCP11L1Q9NUJ3 509 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 USP40Q9NVE5 1235 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 SERPINA10Q9UK55 444 aa11.14□□□□□ -0.63
CDH13-205ENST00000562307 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
CDH13-205ENST00000562307 BAZ2AQ9UIF9 1905 aaKnown RBP11.13□□□□□ -0.63
CDH13-205ENST00000562307 LAMB1P07942 1786 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 CCDC196A0A1B0GTZ2 297 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 F8W031 263 aaPredicted RBP11.13□□□□□ -0.63
CDH13-205ENST00000562307 PRDM1O75626 825 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 VIL1P09327 827 aaKnown RBP11.13□□□□□ -0.63
CDH13-205ENST00000562307 IFNAR1P17181 557 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 PTGER2P43116 358 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 SCNN1DP51172 638 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 RESTQ13127 1097 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 DALRD3Q5D0E6 543 aaKnown RBP11.13□□□□□ -0.63
CDH13-205ENST00000562307 CDC42EP5Q6NZY7 148 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 ZNF654Q8IZM8 581 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 DYNLL2Q96FJ2 89 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 ZNF287Q9HBT7 754 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 ORC3Q9UBD5 711 aaPredicted RBP11.13□□□□□ -0.63
CDH13-205ENST00000562307 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
CDH13-205ENST00000562307 DDX60LQ5H9U9 1706 aaKnown RBP11.12□□□□□ -0.63
CDH13-205ENST00000562307 MYO3BQ8WXR4 1341 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 STK36Q9NRP7 1315 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 H3BQV1 296 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 PRPF40AO75400 957 aaKnown RBP11.12□□□□□ -0.63
CDH13-205ENST00000562307 CALM1P0DP23 149 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 CALM2P0DP24 149 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 CALM3P0DP25 149 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 RASA1P20936 1047 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 CDK8P49336 464 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 GABPAQ06546 454 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 RTN1Q16799 776 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 KLHL40Q2TBA0 621 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 IFIT1BQ5T764 474 aaKnown RBP11.12□□□□□ -0.63
CDH13-205ENST00000562307 IFFO2Q5TF58 517 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 RCSD1Q6JBY9 416 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 TTC6Q86TZ1 520 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 MICU3Q86XE3 530 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 DGKHQ86XP1 1220 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 FANCBQ8NB91 859 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 CHAMP1Q96JM3 812 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 GMLQ99445 158 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 IDI2Q9BXS1 227 aa11.12□□□□□ -0.63
CDH13-205ENST00000562307 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
CDH13-205ENST00000562307 NAV1Q8NEY1 1877 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 SCN9AQ15858 1988 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 TSPY2A6NKD2 308 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 DDAH1O94760 285 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 FMNL1O95466 1100 aaPredicted RBP11.11□□□□□ -0.63
CDH13-205ENST00000562307 RXRAP19793 462 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 NOVP48745 357 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 TFAP4Q01664 338 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 TROAPQ12815 778 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 FAM47AQ5JRC9 791 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 RSBN1LQ6PCB5 846 aaPredicted RBP11.11□□□□□ -0.63
CDH13-205ENST00000562307 CATIPQ7Z7H3 387 aa11.11□□□□□ -0.63
CDH13-205ENST00000562307 NBPF11Q86T75 865 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms