RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 STAP2Q9UGK3 403 aa24.03■■□□□ 1.44
TSPAN3-210ENST00000561277 NAV1Q8NEY1 1877 aa24.03■■□□□ 1.44
TSPAN3-210ENST00000561277 HLA-DOAP06340 250 aa24.03■■□□□ 1.44
TSPAN3-210ENST00000561277 NOL9Q5SY16 702 aaKnown RBP24.03■■□□□ 1.44
TSPAN3-210ENST00000561277 FSD1Q9BTV5 496 aa24.03■■□□□ 1.44
TSPAN3-210ENST00000561277 MYH1P12882 1939 aa24.03■■□□□ 1.44
TSPAN3-210ENST00000561277 LAMB1P07942 1786 aa24.02■■□□□ 1.44
TSPAN3-210ENST00000561277 SCYL3Q8IZE3 742 aa24.02■■□□□ 1.44
TSPAN3-210ENST00000561277 CRACR2BQ8N4Y2 399 aaPredicted RBP24.02■■□□□ 1.44
TSPAN3-210ENST00000561277 TRIM34Q9BYJ4 488 aa24.02■■□□□ 1.44
TSPAN3-210ENST00000561277 PUS7LQ9H0K6 701 aaKnown RBP24.02■■□□□ 1.44
TSPAN3-210ENST00000561277 SAGE1Q9NXZ1 904 aa24.02■■□□□ 1.44
TSPAN3-210ENST00000561277 HERC5Q9UII4 1024 aaKnown RBP24.02■■□□□ 1.44
TSPAN3-210ENST00000561277 PICK1Q9NRD5 415 aa24.01■■□□□ 1.43
TSPAN3-210ENST00000561277 DOCK1Q14185 1865 aa24.01■■□□□ 1.43
TSPAN3-210ENST00000561277 DDX60LQ5H9U9 1706 aaKnown RBP24.01■■□□□ 1.43
TSPAN3-210ENST00000561277 IRF6O14896 467 aa24■■□□□ 1.43
TSPAN3-210ENST00000561277 RNF113AO15541 343 aaKnown RBP24■■□□□ 1.43
TSPAN3-210ENST00000561277 PRKAB2O43741 272 aa24■■□□□ 1.43
TSPAN3-210ENST00000561277 INHBEP58166 350 aa24■■□□□ 1.43
TSPAN3-210ENST00000561277 PPATQ06203 517 aa24■■□□□ 1.43
TSPAN3-210ENST00000561277 PPIL2Q13356 520 aa24■■□□□ 1.43
TSPAN3-210ENST00000561277 IGF2BP3O00425 579 aaKnown RBP eCLIP23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 CTNND1O60716 968 aaKnown RBP23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 GTF2A2P52657 109 aa23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 COL13A1Q5TAT6 717 aaPredicted RBP23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 IFNL1Q8IU54 200 aa23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 APPBP2Q92624 585 aa23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 MS4A4AQ96JQ5 239 aa23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 DNAJC18Q9H819 358 aa23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 MCM9Q9NXL9 1143 aa23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 CCL15-CCL14A0A0B4J2E2 113 aa23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 ZFYP08048 801 aaPredicted RBP23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 CCL15Q16663 113 aa23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 LRRFIP1Q32MZ4 808 aaKnown RBP23.99■■□□□ 1.43
TSPAN3-210ENST00000561277 TBC1D8O95759 1140 aa23.98■■□□□ 1.43
TSPAN3-210ENST00000561277 POLR3DP05423 398 aaPredicted RBP23.98■■□□□ 1.43
TSPAN3-210ENST00000561277 TTC6Q86TZ1 520 aa23.98■■□□□ 1.43
TSPAN3-210ENST00000561277 FOXP4Q8IVH2 680 aaPredicted RBP23.98■■□□□ 1.43
TSPAN3-210ENST00000561277 BRI3BPQ8WY22 251 aa23.98■■□□□ 1.43
TSPAN3-210ENST00000561277 OSBP2Q969R2 916 aa23.98■■□□□ 1.43
TSPAN3-210ENST00000561277 DCP1AQ9NPI6 582 aaPredicted RBP23.98■■□□□ 1.43
TSPAN3-210ENST00000561277 PRDM10Q9NQV6 1147 aa23.98■■□□□ 1.43
TSPAN3-210ENST00000561277 PTPRAP18433 802 aa23.97■■□□□ 1.43
TSPAN3-210ENST00000561277 SNAPC2Q13487 334 aa23.97■■□□□ 1.43
TSPAN3-210ENST00000561277 RRP1BQ14684 758 aaKnown RBP23.97■■□□□ 1.43
TSPAN3-210ENST00000561277 CCDC84Q86UT8 332 aaPredicted RBP23.97■■□□□ 1.43
TSPAN3-210ENST00000561277 PLEKHM2Q8IWE5 1019 aa23.97■■□□□ 1.43
TSPAN3-210ENST00000561277 PTPN18Q99952 460 aa23.97■■□□□ 1.43
TSPAN3-210ENST00000561277 SLC4A4Q9Y6R1 1079 aa23.97■■□□□ 1.43
TSPAN3-210ENST00000561277 PLCD1P51178 756 aa23.96■■□□□ 1.43
TSPAN3-210ENST00000561277 ZHX2Q9Y6X8 837 aa23.96■■□□□ 1.43
TSPAN3-210ENST00000561277 ATAD5Q96QE3 1844 aa23.96■■□□□ 1.43
TSPAN3-210ENST00000561277 TESPA1A2RU30 521 aaPredicted RBP23.95■■□□□ 1.43
TSPAN3-210ENST00000561277 CAP2P40123 477 aa23.95■■□□□ 1.43
TSPAN3-210ENST00000561277 METTL16Q86W50 562 aaKnown RBP23.95■■□□□ 1.43
TSPAN3-210ENST00000561277 EVI5LQ96CN4 794 aa23.95■■□□□ 1.43
TSPAN3-210ENST00000561277 ATP8A2Q9NTI2 1148 aa23.95■■□□□ 1.43
TSPAN3-210ENST00000561277 SERPINB13Q9UIV8 391 aa23.95■■□□□ 1.43
TSPAN3-210ENST00000561277 TRIM6-TRIM34B2RNG4 842 aa23.95■■□□□ 1.42
TSPAN3-210ENST00000561277 M0R2C6 588 aa23.95■■□□□ 1.42
TSPAN3-210ENST00000561277 ALDH1A1P00352 501 aa23.95■■□□□ 1.42
TSPAN3-210ENST00000561277 CETPP11597 493 aa23.95■■□□□ 1.42
TSPAN3-210ENST00000561277 EVX2Q03828 476 aa23.95■■□□□ 1.42
TSPAN3-210ENST00000561277 OTUD7BQ6GQQ9 843 aa23.95■■□□□ 1.42
TSPAN3-210ENST00000561277 EHD4Q9H223 541 aa23.95■■□□□ 1.42
TSPAN3-210ENST00000561277 GPAA1O43292 621 aa23.94■■□□□ 1.42
TSPAN3-210ENST00000561277 GDF11O95390 407 aa23.94■■□□□ 1.42
TSPAN3-210ENST00000561277 CYP2D6P10635 497 aa23.94■■□□□ 1.42
TSPAN3-210ENST00000561277 DDRGK1Q96HY6 314 aa23.94■■□□□ 1.42
TSPAN3-210ENST00000561277 STRBPQ96SI9 672 aaKnown RBP23.94■■□□□ 1.42
TSPAN3-210ENST00000561277 BAZ2AQ9UIF9 1905 aaKnown RBP23.94■■□□□ 1.42
TSPAN3-210ENST00000561277 SHROOM1Q2M3G4 852 aaPredicted RBP23.93■■□□□ 1.42
TSPAN3-210ENST00000561277 RILPL2Q969X0 211 aa23.93■■□□□ 1.42
TSPAN3-210ENST00000561277 SEC62Q99442 399 aaKnown RBP23.93■■□□□ 1.42
TSPAN3-210ENST00000561277 KCNH4Q9UQ05 1017 aa23.93■■□□□ 1.42
TSPAN3-210ENST00000561277 TRIM75PA6NK02 468 aa23.92■■□□□ 1.42
TSPAN3-210ENST00000561277 FAM43AQ8N2R8 423 aa23.92■■□□□ 1.42
TSPAN3-210ENST00000561277 OSBPL3Q9H4L5 887 aa23.92■■□□□ 1.42
TSPAN3-210ENST00000561277 AFG3L2Q9Y4W6 797 aa23.92■■□□□ 1.42
TSPAN3-210ENST00000561277 PHIPQ8WWQ0 1821 aa23.92■■□□□ 1.42
TSPAN3-210ENST00000561277 PDE4AP27815 886 aa23.91■■□□□ 1.42
TSPAN3-210ENST00000561277 R3HDMLQ9H3Y0 253 aa23.91■■□□□ 1.42
TSPAN3-210ENST00000561277 CASP8AP2Q9UKL3 1982 aa23.91■■□□□ 1.42
TSPAN3-210ENST00000561277 CYP2D7A0A087X1C5 515 aa23.91■■□□□ 1.42
TSPAN3-210ENST00000561277 BTBD19C9JJ37 291 aa23.91■■□□□ 1.42
TSPAN3-210ENST00000561277 CXCL11O14625 94 aa23.91■■□□□ 1.42
TSPAN3-210ENST00000561277 JAG1P78504 1218 aa23.91■■□□□ 1.42
TSPAN3-210ENST00000561277 ZMYM1Q5SVZ6 1142 aa23.91■■□□□ 1.42
TSPAN3-210ENST00000561277 AMOTL1Q8IY63 956 aa23.91■■□□□ 1.42
TSPAN3-210ENST00000561277 USP17L12C9JPN9 530 aa23.9■■□□□ 1.42
TSPAN3-210ENST00000561277 USP17L21D6R901 530 aa23.9■■□□□ 1.42
TSPAN3-210ENST00000561277 ASNSP08243 561 aa23.9■■□□□ 1.42
TSPAN3-210ENST00000561277 CRHR2Q13324 411 aa23.9■■□□□ 1.42
TSPAN3-210ENST00000561277 TATDN1Q6P1N9 297 aa23.9■■□□□ 1.42
TSPAN3-210ENST00000561277 ZBTB21Q9ULJ3 1066 aa23.9■■□□□ 1.42
TSPAN3-210ENST00000561277 USP17L5A8MUK1 530 aa23.89■■□□□ 1.41
TSPAN3-210ENST00000561277 GABPAQ06546 454 aa23.89■■□□□ 1.41
TSPAN3-210ENST00000561277 TAF1CQ15572 869 aaPredicted RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms