RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 ADH7P40394 386 aa7.36□□□□□ -1.23
HMG20A-212ENST00000560986 PRRT3Q5FWE3 981 aa7.36□□□□□ -1.23
HMG20A-212ENST00000560986 ALG1LQ6GMV1 187 aa7.36□□□□□ -1.23
HMG20A-212ENST00000560986 C20orf204Q6ZNR8 217 aa7.36□□□□□ -1.23
HMG20A-212ENST00000560986 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.36□□□□□ -1.23
HMG20A-212ENST00000560986 SNX29Q8TEQ0 813 aa7.36□□□□□ -1.23
HMG20A-212ENST00000560986 SETDB2Q96T68 719 aa7.36□□□□□ -1.23
HMG20A-212ENST00000560986 BCL11AQ9H165 835 aa7.36□□□□□ -1.23
HMG20A-212ENST00000560986 TPSG1Q9NRR2 321 aa7.36□□□□□ -1.23
HMG20A-212ENST00000560986 RTL1A6NKG5 1358 aa7.35□□□□□ -1.23
HMG20A-212ENST00000560986 ACEP12821 1306 aa7.35□□□□□ -1.23
HMG20A-212ENST00000560986 SLFN5Q08AF3 891 aa7.35□□□□□ -1.23
HMG20A-212ENST00000560986 LMOD3Q0VAK6 560 aa7.35□□□□□ -1.23
HMG20A-212ENST00000560986 DUSP9Q99956 384 aaKnown RBP7.35□□□□□ -1.23
HMG20A-212ENST00000560986 PPP4R2Q9NY27 417 aa7.35□□□□□ -1.23
HMG20A-212ENST00000560986 PARP2Q9UGN5 583 aa7.35□□□□□ -1.23
HMG20A-212ENST00000560986 RCAN3Q9UKA8 241 aa7.35□□□□□ -1.23
HMG20A-212ENST00000560986 KIF1AQ12756 1690 aa7.35□□□□□ -1.23
HMG20A-212ENST00000560986 PHACTR2O75167 634 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 VAMP1P23763 118 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.23
HMG20A-212ENST00000560986 CCINQ13939 588 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 GRIK4Q16099 956 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 FOXD4L6Q3SYB3 417 aaPredicted RBP7.34□□□□□ -1.23
HMG20A-212ENST00000560986 DUSP27Q5VZP5 1158 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 FOXD4L3Q6VB84 417 aaPredicted RBP7.34□□□□□ -1.23
HMG20A-212ENST00000560986 FBF1Q8TES7 1133 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 GSX2Q9BZM3 304 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 MYH16Q9H6N6 1097 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 ZFYVE28Q9HCC9 887 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 ABI2Q9NYB9 513 aaPredicted RBP7.34□□□□□ -1.23
HMG20A-212ENST00000560986 POLKQ9UBT6 870 aa7.34□□□□□ -1.23
HMG20A-212ENST00000560986 PHRF1Q9P1Y6 1649 aaKnown RBP7.34□□□□□ -1.24
HMG20A-212ENST00000560986 FLT4P35916 1363 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 MAPK8IP3Q9UPT6 1336 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 SASH3O75995 380 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 APBA3O96018 575 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 U2AF1L5P0DN76 240 aaPredicted RBP7.33□□□□□ -1.24
HMG20A-212ENST00000560986 TARSP26639 723 aaKnown RBP7.33□□□□□ -1.24
HMG20A-212ENST00000560986 U2AF1Q01081 240 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMG20A-212ENST00000560986 TRIM28Q13263 835 aaKnown RBP7.33□□□□□ -1.24
HMG20A-212ENST00000560986 ZMYM1Q5SVZ6 1142 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 USPL1Q5W0Q7 1092 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 KRT25Q7Z3Z0 450 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 PLEKHF1Q96S99 279 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 CHRDQ9H2X0 955 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 C19orf44Q9H6X5 657 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 RNF19AQ9NV58 838 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 CNTN3Q9P232 1028 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 SBNO1A3KN83 1393 aa7.33□□□□□ -1.24
HMG20A-212ENST00000560986 ABCC6O95255 1503 aa7.32□□□□□ -1.24
HMG20A-212ENST00000560986 LMTK3Q96Q04 1460 aa7.32□□□□□ -1.24
HMG20A-212ENST00000560986 APAF1O14727 1248 aa7.32□□□□□ -1.24
HMG20A-212ENST00000560986 RRP1P56182 461 aaKnown RBP7.32□□□□□ -1.24
HMG20A-212ENST00000560986 DAB2P98082 770 aa7.32□□□□□ -1.24
HMG20A-212ENST00000560986 CNGB1Q14028 1251 aaPredicted RBP7.32□□□□□ -1.24
HMG20A-212ENST00000560986 TTC39BQ5VTQ0 682 aaPredicted RBP7.32□□□□□ -1.24
HMG20A-212ENST00000560986 TMC4Q7Z404 712 aa7.32□□□□□ -1.24
HMG20A-212ENST00000560986 TCP11L2Q8N4U5 519 aa7.32□□□□□ -1.24
HMG20A-212ENST00000560986 C1orf127Q8N9H9 656 aa7.32□□□□□ -1.24
HMG20A-212ENST00000560986 KCNH5Q8NCM2 988 aa7.32□□□□□ -1.24
HMG20A-212ENST00000560986 NGDNQ8NEJ9 315 aaKnown RBP7.32□□□□□ -1.24
HMG20A-212ENST00000560986 ARHGEF10O15013 1369 aa7.32□□□□□ -1.24
HMG20A-212ENST00000560986 IL13P35225 146 aa7.31□□□□□ -1.24
HMG20A-212ENST00000560986 MRPL58Q14197 206 aaKnown RBP7.31□□□□□ -1.24
HMG20A-212ENST00000560986 BHMTQ93088 406 aa7.31□□□□□ -1.24
HMG20A-212ENST00000560986 PMEPA1Q969W9 287 aa7.31□□□□□ -1.24
HMG20A-212ENST00000560986 CCDC74AQ96AQ1 378 aa7.31□□□□□ -1.24
HMG20A-212ENST00000560986 FAM161BQ96MY7 647 aa7.31□□□□□ -1.24
HMG20A-212ENST00000560986 PNMA5Q96PV4 448 aa7.31□□□□□ -1.24
HMG20A-212ENST00000560986 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.31□□□□□ -1.24
HMG20A-212ENST00000560986 KDRP35968 1356 aa7.31□□□□□ -1.24
HMG20A-212ENST00000560986 EREGO14944 169 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 DYRK3O43781 588 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 MMP20O60882 483 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 RARAP10276 462 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 NFKB1P19838 968 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 GNA15P30679 374 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 TMPOP42166 694 aaKnown RBP7.3□□□□□ -1.24
HMG20A-212ENST00000560986 PSMD2Q13200 908 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 PDE3AQ14432 1141 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 NME9Q86XW9 330 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMG20A-212ENST00000560986 EFCC1Q9HA90 598 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 ZFATQ9P243 1243 aa7.3□□□□□ -1.24
HMG20A-212ENST00000560986 SOS1Q07889 1333 aaPredicted RBP7.29□□□□□ -1.24
HMG20A-212ENST00000560986 PIK3C2AO00443 1686 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 HTATSF1O43719 755 aaKnown RBP7.29□□□□□ -1.24
HMG20A-212ENST00000560986 SORBS3O60504 671 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 LILRB5O75023 590 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 RECKO95980 971 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 CYP2E1P05181 493 aaPredicted RBP7.29□□□□□ -1.24
HMG20A-212ENST00000560986 CES1P23141 567 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 TRAPPC3LQ5T215 181 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 GALNT12Q8IXK2 581 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 OR13H1Q8NG92 308 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 FRMD6Q96NE9 622 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 NACC1Q96RE7 527 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 IGSF5Q9NSI5 407 aa7.29□□□□□ -1.24
HMG20A-212ENST00000560986 RGPD1P0DJD0 1748 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms