RNA–Protein interactions for RNA: ENST00000560816.5

ETFA-217, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-217ENST00000560816 MYH2Q9UKX2 1941 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 ORC4O43929 436 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 PCP11498 1178 aaKnown RBP9.05□□□□□ -0.96
ETFA-217ENST00000560816 VEGFAP15692 232 aaPredicted RBP9.05□□□□□ -0.96
ETFA-217ENST00000560816 PSMA5P28066 241 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 TRDNQ13061 729 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 MFSD6Q6ZSS7 791 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 RALYLQ86SE5 291 aaKnown RBP9.05□□□□□ -0.96
ETFA-217ENST00000560816 STK11IPQ8N1F8 1099 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 ZNF526Q8TF50 670 aaPredicted RBP9.05□□□□□ -0.96
ETFA-217ENST00000560816 DYNLL2Q96FJ2 89 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 NEK1Q96PY6 1258 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 KIF2CQ99661 725 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 TM6SF1Q9BZW5 370 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 DEFB129Q9H1M3 183 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 CNNM2Q9H8M5 875 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 RRAGCQ9HB90 399 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 TOMM22Q9NS69 142 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 TAOK2Q9UL54 1235 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
ETFA-217ENST00000560816 PPP2R3BQ9Y5P8 575 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 TACC3Q9Y6A5 838 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 WDR90Q96KV7 1748 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 NEDD4P46934 1319 aa9.05□□□□□ -0.96
ETFA-217ENST00000560816 PRDM1O75626 825 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 HMGB1P09429 215 aaKnown RBP9.04□□□□□ -0.96
ETFA-217ENST00000560816 FGRP09769 529 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 CASTP20810 708 aaKnown RBP9.04□□□□□ -0.96
ETFA-217ENST00000560816 CDK8P49336 464 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 GABPAQ06546 454 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 PDE4BQ07343 736 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 RABEP1Q15276 862 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 ADCK5Q3MIX3 580 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 C16orf86Q6ZW13 317 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 FOXP4Q8IVH2 680 aaPredicted RBP9.04□□□□□ -0.96
ETFA-217ENST00000560816 SULF1Q8IWU6 871 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 CDAN1Q8IWY9 1227 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 MB21D2Q8IYB1 491 aaPredicted RBP9.04□□□□□ -0.96
ETFA-217ENST00000560816 CRACR2BQ8N4Y2 399 aaPredicted RBP9.04□□□□□ -0.96
ETFA-217ENST00000560816 NCOA7Q8NI08 942 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 TEPSINQ96N21 525 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 UPF3BQ9BZI7 483 aaKnown RBP9.04□□□□□ -0.96
ETFA-217ENST00000560816 KRT23Q9C075 422 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 ZNF287Q9HBT7 754 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 ZSWIM6Q9HCJ5 1215 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 NMRK2Q9NPI5 230 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 PI4KBQ9UBF8 816 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 SWAP70Q9UH65 585 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 PGAP2Q9UHJ9 254 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 SERPINB13Q9UIV8 391 aa9.04□□□□□ -0.96
ETFA-217ENST00000560816 SCAF8Q9UPN6 1271 aaKnown RBP9.04□□□□□ -0.96
ETFA-217ENST00000560816 DDX60LQ5H9U9 1706 aaKnown RBP9.04□□□□□ -0.96
ETFA-217ENST00000560816 GOLGB1Q14789 3259 aaKnown RBP9.03□□□□□ -0.96
ETFA-217ENST00000560816 B4E1Z4 1266 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 ADM5C9JUS6 153 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 KDM4AO75164 1064 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 RPS6KB1P23443 525 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 NT5C2P49902 561 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 RRP12Q5JTH9 1297 aaKnown RBP9.03□□□□□ -0.96
ETFA-217ENST00000560816 BLOC1S2Q6QNY1 142 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 KRT26Q7Z3Y9 468 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 METTL16Q86W50 562 aaKnown RBP9.03□□□□□ -0.96
ETFA-217ENST00000560816 SLC44A5Q8NCS7 719 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 ESR2Q92731 530 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 HOOK2Q96ED9 719 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 DNAJC18Q9H819 358 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 MKNK2Q9HBH9 465 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 INCENPQ9NQS7 918 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 HERC5Q9UII4 1024 aaKnown RBP9.03□□□□□ -0.96
ETFA-217ENST00000560816 CLEC11AQ9Y240 323 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 CYP46A1Q9Y6A2 500 aa9.03□□□□□ -0.96
ETFA-217ENST00000560816 NAV1Q8NEY1 1877 aa9.02□□□□□ -0.96
ETFA-217ENST00000560816 FAM196BA6NMK8 535 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 RANBP6O60518 1105 aaKnown RBP9.02□□□□□ -0.97
ETFA-217ENST00000560816 POTEIP0CG38 1075 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 POTEJP0CG39 1038 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 CPA1P15085 419 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 RASA1P20936 1047 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 MCM5P33992 734 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 SHMT1P34896 483 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 NEK4P51957 841 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 ANTXR2P58335 489 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 COL9A3Q14050 684 aaPredicted RBP9.02□□□□□ -0.97
ETFA-217ENST00000560816 NBPF12Q5TAG4 269 aaPredicted RBP9.02□□□□□ -0.97
ETFA-217ENST00000560816 RUFY3Q7L099 469 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 CDC37L1Q7L3B6 337 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
ETFA-217ENST00000560816 LDHDQ86WU2 507 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
ETFA-217ENST00000560816 WDR19Q8NEZ3 1342 aa9.02□□□□□ -0.97
ETFA-217ENST00000560816 TSPY2A6NKD2 308 aa9.01□□□□□ -0.97
ETFA-217ENST00000560816 PRC1O43663 620 aa9.01□□□□□ -0.97
ETFA-217ENST00000560816 ST18O60284 1047 aa9.01□□□□□ -0.97
ETFA-217ENST00000560816 TBC1D12O60347 775 aa9.01□□□□□ -0.97
ETFA-217ENST00000560816 SLURP2P0DP57 97 aa9.01□□□□□ -0.97
ETFA-217ENST00000560816 EXOSC10Q01780 885 aaKnown RBP9.01□□□□□ -0.97
ETFA-217ENST00000560816 MAP3K10Q02779 954 aa9.01□□□□□ -0.97
ETFA-217ENST00000560816 SUPT20HL1Q3ZLR7 823 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms