RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 NAPBQ9H115 298 aa14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 CTNNA3Q9UI47 895 aa14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 PALD1Q9ULE6 856 aa14.4□□□□□ -0.1
RABGGTA-215ENST00000560207 SSC5DA1L4H1 1573 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 SIPA1L1O43166 1804 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 GSG1L2A8MUP6 293 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 M0R2C6 588 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 ZBTB48P10074 688 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 PCP11498 1178 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 CHMLP26374 656 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 TDO2P48775 406 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 C12orf60Q5U649 245 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 SH3BP5LQ7L8J4 393 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 ZFPM1Q8IX07 1006 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 IFNL3Q8IZI9 196 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 SDR42E1Q8WUS8 393 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 SLC10A4Q96EP9 437 aa14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 SCAF8Q9UPN6 1271 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-215ENST00000560207 A0A0D9SFI3 127 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 CDC45O75419 566 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 MAP2K2P36507 400 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 INHBEP58166 350 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 NOGQ13253 232 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 NOL9Q5SY16 702 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 KIAA1211Q6ZU35 1233 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 CCDC17Q96LX7 622 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 FAM227BQ96M60 508 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 WRNIP1Q96S55 665 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 DSCC1Q9BVC3 393 aa14.38□□□□□ -0.11
RABGGTA-215ENST00000560207 LAMA4Q16363 1823 aa14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 USP17L12C9JPN9 530 aa14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 USP17L21D6R901 530 aa14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 ASNSP08243 561 aa14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 HSPD1P10809 573 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 ZNF157P51786 506 aaPredicted RBP14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 FMR1Q06787 632 aaKnown RBP eCLIP14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 MIGA2Q7L4E1 593 aa14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 ERO1BQ86YB8 467 aa14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 SEC62Q99442 399 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 PICK1Q9NRD5 415 aa14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 SAP30BPQ9UHR5 308 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-215ENST00000560207 ROBO3Q96MS0 1386 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 PHF20L1A8MW92 1017 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 UBE2Q2LH0YL09 131 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 SGSM2O43147 1006 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 EPB41L2O43491 1005 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 PRKAB2O43741 272 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 CAP2P40123 477 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 PPATQ06203 517 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 GABPAQ06546 454 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 PDE4BQ07343 736 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 SLFNL1Q499Z3 407 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 PPP4R3BQ5MIZ7 849 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 TATDN1Q6P1N9 297 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 CTR9Q6PD62 1173 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 SCYL3Q8IZE3 742 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
RABGGTA-215ENST00000560207 CHGBP05060 677 aa14.35□□□□□ -0.11
RABGGTA-215ENST00000560207 PRKG1Q13976 671 aa14.35□□□□□ -0.11
RABGGTA-215ENST00000560207 DLK2Q6UY11 383 aa14.35□□□□□ -0.11
RABGGTA-215ENST00000560207 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-215ENST00000560207 C16orf86Q6ZW13 317 aa14.35□□□□□ -0.11
RABGGTA-215ENST00000560207 RNF41Q9H4P4 317 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-215ENST00000560207 AS3MTQ9HBK9 375 aa14.35□□□□□ -0.11
RABGGTA-215ENST00000560207 ANAPC4Q9UJX5 808 aa14.35□□□□□ -0.11
RABGGTA-215ENST00000560207 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 MINDY4BA8MYZ0 360 aa14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 SLC10A3P09131 477 aa14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 PLCD1P51178 756 aa14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 VGLL4Q14135 290 aa14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 CERKLQ49MI3 558 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 PAXIP1Q6ZW49 1069 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 CDAN1Q8IWY9 1227 aa14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 CAPNS2Q96L46 248 aa14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 MKNK2Q9HBH9 465 aa14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-215ENST00000560207 THSD7BQ9C0I4 1608 aa14.33□□□□□ -0.11
RABGGTA-215ENST00000560207 MANSC4A6NHS7 340 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 CXCL11O14625 94 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 ZNF213O14771 459 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 REC8O95072 547 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 FGAP02671 866 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 PPARAQ07869 468 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 SREBF2Q12772 1141 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 PPIL2Q13356 520 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 IMMTQ16891 758 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 CCDC129Q6ZRS4 1044 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 ZNF589Q86UQ0 364 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 ESYT1Q9BSJ8 1104 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 PHIPQ8WWQ0 1821 aa14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 WDR33Q9C0J8 1336 aaKnown RBP14.33□□□□□ -0.12
RABGGTA-215ENST00000560207 USP17L5A8MUK1 530 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 CDK8P49336 464 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 GTF2A2P52657 109 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 ABCB5Q2M3G0 1257 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 SPRYD7Q5W111 196 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 OTUD7BQ6GQQ9 843 aa14.32□□□□□ -0.12
RABGGTA-215ENST00000560207 TMEM179Q6ZVK1 233 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms