RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 DNAJC2Q99543 621 aaKnown RBP16.03■□□□□ 0.16
SMAD3-213ENST00000560175 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■■■□□ 17.3
SMAD3-213ENST00000560175 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
SMAD3-213ENST00000560175 AFG3L2Q9Y4W6 797 aa16.03■□□□□ 0.16
SMAD3-213ENST00000560175 ATAD5Q96QE3 1844 aa16.03■□□□□ 0.16
SMAD3-213ENST00000560175 SALL3Q9BXA9 1300 aa16.02■□□□□ 0.16
SMAD3-213ENST00000560175 ZNF532Q9HCE3 1301 aa16.02■□□□□ 0.16
SMAD3-213ENST00000560175 CAP2P40123 477 aa16.02■□□□□ 0.16
SMAD3-213ENST00000560175 RRP1BQ14684 758 aaKnown RBP16.02■□□□□ 0.16
SMAD3-213ENST00000560175 UBE3CQ15386 1083 aa16.02■□□□□ 0.16
SMAD3-213ENST00000560175 FAM43AQ8N2R8 423 aa16.02■□□□□ 0.16
SMAD3-213ENST00000560175 GCC1Q96CN9 775 aa16.02■□□□□ 0.16
SMAD3-213ENST00000560175 DNAJC18Q9H819 358 aa16.02■□□□□ 0.16
SMAD3-213ENST00000560175 PALD1Q9ULE6 856 aa16.02■□□□□ 0.16
SMAD3-213ENST00000560175 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.15
SMAD3-213ENST00000560175 TTC41PQ6P2S7 1318 aa16.01■□□□□ 0.15
SMAD3-213ENST00000560175 MAGEB6P1A0A0J9YX57 407 aa16.01■□□□□ 0.15
SMAD3-213ENST00000560175 BTBD19C9JJ37 291 aa16.01■□□□□ 0.15
SMAD3-213ENST00000560175 FKTNO75072 461 aa16.01■□□□□ 0.15
SMAD3-213ENST00000560175 CRHR2Q13324 411 aa16.01■□□□□ 0.15
SMAD3-213ENST00000560175 MCOLN1Q9GZU1 580 aa16.01■□□□□ 0.15
SMAD3-213ENST00000560175 ZHX2Q9Y6X8 837 aa16.01■□□□□ 0.15
SMAD3-213ENST00000560175 FAM196BA6NMK8 535 aa16■□□□□ 0.15
SMAD3-213ENST00000560175 CTU1Q7Z7A3 348 aaKnown RBP16■□□□□ 0.15
SMAD3-213ENST00000560175 ANKRD23Q86SG2 305 aa16■□□□□ 0.15
SMAD3-213ENST00000560175 PI4K2BQ8TCG2 481 aa16■□□□□ 0.15
SMAD3-213ENST00000560175 ABHD8Q96I13 439 aa16■□□□□ 0.15
SMAD3-213ENST00000560175 TBC1D2Q9BYX2 928 aa16■□□□□ 0.15
SMAD3-213ENST00000560175 DDX24Q9GZR7 859 aaKnown RBP eCLIP16■□□□□ 0.15
SMAD3-213ENST00000560175 EHD4Q9H223 541 aa16■□□□□ 0.15
SMAD3-213ENST00000560175 PICK1Q9NRD5 415 aa16■□□□□ 0.15
SMAD3-213ENST00000560175 GINM1Q9NU53 330 aa16■□□□□ 0.15
SMAD3-213ENST00000560175 SUPT16HQ9Y5B9 1047 aaKnown RBP16■□□□□ 0.15
SMAD3-213ENST00000560175 A0A0G2JLL6 359 aaPredicted RBP15.99■□□□□ 0.15
SMAD3-213ENST00000560175 PKN2Q16513 984 aaKnown RBP15.99■□□□□ 0.15
SMAD3-213ENST00000560175 GPAT2Q6NUI2 795 aa15.99■□□□□ 0.15
SMAD3-213ENST00000560175 TATDN1Q6P1N9 297 aa15.99■□□□□ 0.15
SMAD3-213ENST00000560175 PRRT2Q7Z6L0 340 aaPredicted RBP15.99■□□□□ 0.15
SMAD3-213ENST00000560175 SMC5Q8IY18 1101 aa15.99■□□□□ 0.15
SMAD3-213ENST00000560175 KBTBD3Q8NAB2 608 aa15.99■□□□□ 0.15
SMAD3-213ENST00000560175 TLR2O60603 784 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 USP5P45974 858 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 GABPAQ06546 454 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 DGKZQ13574 1117 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 SLFNL1Q499Z3 407 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 ZSCAN25Q6NSZ9 544 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 GPATCH3Q96I76 525 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 CRNKL1Q9BZJ0 848 aaKnown RBP15.98■□□□□ 0.15
SMAD3-213ENST00000560175 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 ZFYVE28Q9HCC9 887 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 STAP2Q9UGK3 403 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 TAOK2Q9UL54 1235 aa15.98■□□□□ 0.15
SMAD3-213ENST00000560175 GLRX3O76003 335 aaKnown RBP15.97■□□□□ 0.15
SMAD3-213ENST00000560175 CHGBP05060 677 aa15.97■□□□□ 0.15
SMAD3-213ENST00000560175 HLA-DOAP06340 250 aa15.97■□□□□ 0.15
SMAD3-213ENST00000560175 PLCD1P51178 756 aa15.97■□□□□ 0.15
SMAD3-213ENST00000560175 JAG1P78504 1218 aa15.97■□□□□ 0.15
SMAD3-213ENST00000560175 TAF1CQ15572 869 aaPredicted RBP15.97■□□□□ 0.15
SMAD3-213ENST00000560175 FASTKD5Q7L8L6 764 aaKnown RBP15.97■□□□□ 0.15
SMAD3-213ENST00000560175 TTC6Q86TZ1 520 aa15.97■□□□□ 0.15
SMAD3-213ENST00000560175 LCORLQ8N3X6 602 aa15.97■□□□□ 0.15
SMAD3-213ENST00000560175 OTUD7AQ8TE49 926 aaPredicted RBP15.97■□□□□ 0.15
SMAD3-213ENST00000560175 WDR18Q9BV38 432 aa15.97■□□□□ 0.15
SMAD3-213ENST00000560175 DCP1AQ9NPI6 582 aaPredicted RBP15.97■□□□□ 0.15
SMAD3-213ENST00000560175 SAP30BPQ9UHR5 308 aaKnown RBP15.97■□□□□ 0.15
SMAD3-213ENST00000560175 SLC45A1Q9Y2W3 748 aa15.97■□□□□ 0.15
SMAD3-213ENST00000560175 NAV1Q8NEY1 1877 aa15.97■□□□□ 0.15
SMAD3-213ENST00000560175 ADGRA2Q96PE1 1338 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 USP17L5A8MUK1 530 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 ERC2O15083 957 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 ASNSP08243 561 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 SP3Q02447 781 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 SH3D19Q5HYK7 790 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 ANKRD45Q5TZF3 282 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 C17orf99Q6UX52 265 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 ZNF280CQ8ND82 737 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 PUS7LQ9H0K6 701 aaKnown RBP15.96■□□□□ 0.15
SMAD3-213ENST00000560175 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.15
SMAD3-213ENST00000560175 ATP8A2Q9NTI2 1148 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.96■□□□□ 0.15
SMAD3-213ENST00000560175 SERPINB13Q9UIV8 391 aa15.96■□□□□ 0.15
SMAD3-213ENST00000560175 LOC285556D6RIA3 1793 aa15.95■□□□□ 0.14
SMAD3-213ENST00000560175 PDHXO00330 501 aa15.95■□□□□ 0.14
SMAD3-213ENST00000560175 IGHDP01880 384 aa15.95■□□□□ 0.14
SMAD3-213ENST00000560175 MX1P20591 662 aa15.95■□□□□ 0.14
SMAD3-213ENST00000560175 CAP1Q01518 475 aa15.95■□□□□ 0.14
SMAD3-213ENST00000560175 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
SMAD3-213ENST00000560175 SDR42E1Q8WUS8 393 aa15.95■□□□□ 0.14
SMAD3-213ENST00000560175 ARMT1Q9H993 441 aa15.95■□□□□ 0.14
SMAD3-213ENST00000560175 BAZ2AQ9UIF9 1905 aaKnown RBP15.95■□□□□ 0.14
SMAD3-213ENST00000560175 ZFYP08048 801 aaPredicted RBP15.94■□□□□ 0.14
SMAD3-213ENST00000560175 SPP2Q13103 211 aa15.94■□□□□ 0.14
SMAD3-213ENST00000560175 CCDC84Q86UT8 332 aaPredicted RBP15.94■□□□□ 0.14
SMAD3-213ENST00000560175 CRACR2BQ8N4Y2 399 aaPredicted RBP15.94■□□□□ 0.14
SMAD3-213ENST00000560175 PROCA1Q8NCQ7 364 aaPredicted RBP15.94■□□□□ 0.14
SMAD3-213ENST00000560175 ERO1AQ96HE7 468 aa15.94■□□□□ 0.14
SMAD3-213ENST00000560175 HTTP42858 3142 aa15.93■□□□□ 0.14
SMAD3-213ENST00000560175 RNF113AO15541 343 aaKnown RBP15.93■□□□□ 0.14
SMAD3-213ENST00000560175 PRKAB2O43741 272 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms