RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 DACH1Q9UI36 760 aa18.77■□□□□ 0.59
APH1B-207ENST00000559971 RANBP6O60518 1105 aaKnown RBP18.76■□□□□ 0.59
APH1B-207ENST00000559971 FGRP09769 529 aa18.76■□□□□ 0.59
APH1B-207ENST00000559971 SPTY2D1Q68D10 685 aaPredicted RBP18.76■□□□□ 0.59
APH1B-207ENST00000559971 MPNDQ8N594 471 aa18.76■□□□□ 0.59
APH1B-207ENST00000559971 PPFIA3O75145 1194 aa18.75■□□□□ 0.59
APH1B-207ENST00000559971 SYCP1Q15431 976 aa18.75■□□□□ 0.59
APH1B-207ENST00000559971 RRP12Q5JTH9 1297 aaKnown RBP18.75■□□□□ 0.59
APH1B-207ENST00000559971 FBXO33Q7Z6M2 555 aa18.75■□□□□ 0.59
APH1B-207ENST00000559971 CATIPQ7Z7H3 387 aa18.75■□□□□ 0.59
APH1B-207ENST00000559971 RAB11FIP4Q86YS3 637 aa18.75■□□□□ 0.59
APH1B-207ENST00000559971 NLRP3Q96P20 1036 aa18.75■□□□□ 0.59
APH1B-207ENST00000559971 BRMS1Q9HCU9 246 aa18.75■□□□□ 0.59
APH1B-207ENST00000559971 MINPP1Q9UNW1 487 aa18.75■□□□□ 0.59
APH1B-207ENST00000559971 COL5A3P25940 1745 aaPredicted RBP18.75■□□□□ 0.59
APH1B-207ENST00000559971 CHD4Q14839 1912 aa18.74■□□□□ 0.59
APH1B-207ENST00000559971 CCP110O43303 1012 aa18.74■□□□□ 0.59
APH1B-207ENST00000559971 RPS6KA4O75676 772 aa18.74■□□□□ 0.59
APH1B-207ENST00000559971 WDHD1O75717 1129 aaPredicted RBP18.74■□□□□ 0.59
APH1B-207ENST00000559971 DDAH1O94760 285 aa18.74■□□□□ 0.59
APH1B-207ENST00000559971 CCDC178Q5BJE1 867 aa18.74■□□□□ 0.59
APH1B-207ENST00000559971 ATP8A2Q9NTI2 1148 aa18.74■□□□□ 0.59
APH1B-207ENST00000559971 ABCF2Q9UG63 623 aa18.74■□□□□ 0.59
APH1B-207ENST00000559971 NARFQ9UHQ1 456 aa18.74■□□□□ 0.59
APH1B-207ENST00000559971 PRKAB2O43741 272 aa18.73■□□□□ 0.59
APH1B-207ENST00000559971 PTPREP23469 700 aa18.73■□□□□ 0.59
APH1B-207ENST00000559971 SEC23AQ15436 765 aa18.73■□□□□ 0.59
APH1B-207ENST00000559971 VPS72Q15906 364 aa18.73■□□□□ 0.59
APH1B-207ENST00000559971 ERFEQ4G0M1 354 aa18.73■□□□□ 0.59
APH1B-207ENST00000559971 NBPF11Q86T75 865 aa18.73■□□□□ 0.59
APH1B-207ENST00000559971 DIS3L2Q8IYB7 885 aaKnown RBP18.73■□□□□ 0.59
APH1B-207ENST00000559971 TRIML1Q8N9V2 468 aa18.73■□□□□ 0.59
APH1B-207ENST00000559971 FBXO41Q8TF61 875 aa18.73■□□□□ 0.59
APH1B-207ENST00000559971 RIOK1Q9BRS2 568 aaKnown RBP18.73■□□□□ 0.59
APH1B-207ENST00000559971 CRNKL1Q9BZJ0 848 aaKnown RBP18.73■□□□□ 0.59
APH1B-207ENST00000559971 KCNH3Q9ULD8 1083 aa18.73■□□□□ 0.59
APH1B-207ENST00000559971 PRPF3O43395 683 aaKnown RBP18.72■□□□□ 0.59
APH1B-207ENST00000559971 ORC4O43929 436 aa18.72■□□□□ 0.59
APH1B-207ENST00000559971 MARCKSP29966 332 aaPredicted RBP18.72■□□□□ 0.59
APH1B-207ENST00000559971 RPS8P62241 208 aaKnown RBP18.72■□□□□ 0.59
APH1B-207ENST00000559971 SHC4Q6S5L8 630 aa18.72■□□□□ 0.59
APH1B-207ENST00000559971 KRBA2Q6ZNG9 492 aa18.72■□□□□ 0.59
APH1B-207ENST00000559971 CERS3Q8IU89 383 aa18.72■□□□□ 0.59
APH1B-207ENST00000559971 CNNM3Q8NE01 707 aa18.72■□□□□ 0.59
APH1B-207ENST00000559971 CACTINQ8WUQ7 758 aaKnown RBP18.72■□□□□ 0.59
APH1B-207ENST00000559971 AIFM3Q96NN9 605 aa18.72■□□□□ 0.59
APH1B-207ENST00000559971 ZSCAN10Q96SZ4 725 aaPredicted RBP18.72■□□□□ 0.59
APH1B-207ENST00000559971 SETDB2Q96T68 719 aa18.72■□□□□ 0.59
APH1B-207ENST00000559971 PYM1Q9BRP8 204 aaKnown RBP18.72■□□□□ 0.59
APH1B-207ENST00000559971 MYO5AQ9Y4I1 1855 aaKnown RBP18.72■□□□□ 0.59
APH1B-207ENST00000559971 RXRAP19793 462 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 MYL5Q02045 173 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 TPTE2Q6XPS3 522 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 CCDC144CPQ8IYA2 1237 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 MIGA1Q8NAN2 632 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 FAM84BQ96KN1 310 aaPredicted RBP18.71■□□□□ 0.59
APH1B-207ENST00000559971 SENP2Q9HC62 589 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 NRBP1Q9UHY1 535 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 SRPRBQ9Y5M8 271 aaKnown RBP18.71■□□□□ 0.59
APH1B-207ENST00000559971 MYH14Q7Z406 1995 aaKnown RBP18.71■□□□□ 0.59
APH1B-207ENST00000559971 TNKSO95271 1327 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 MINDY4BA8MYZ0 360 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 ZPR1O75312 459 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 TPD52L1Q16890 204 aaPredicted RBP18.71■□□□□ 0.59
APH1B-207ENST00000559971 DPCR1Q3MIW9 517 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 SBK1Q52WX2 424 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 IFIT1BQ5T764 474 aaKnown RBP18.71■□□□□ 0.59
APH1B-207ENST00000559971 LINC00116Q8NCU8 138 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 CCDC112Q8NEF3 446 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 GJB4Q9NTQ9 266 aa18.71■□□□□ 0.59
APH1B-207ENST00000559971 ARPP21Q9UBL0 812 aaPredicted RBP18.71■□□□□ 0.59
APH1B-207ENST00000559971 SNAP23O00161 211 aa18.7■□□□□ 0.58
APH1B-207ENST00000559971 SKILP12757 684 aa18.7■□□□□ 0.58
APH1B-207ENST00000559971 HIBADHP31937 336 aaKnown RBP18.7■□□□□ 0.58
APH1B-207ENST00000559971 GYG1P46976 350 aa18.7■□□□□ 0.58
APH1B-207ENST00000559971 FAM177A1Q8N128 213 aaPredicted RBP18.7■□□□□ 0.58
APH1B-207ENST00000559971 MLKLQ8NB16 471 aa18.7■□□□□ 0.58
APH1B-207ENST00000559971 MYL10Q9BUA6 226 aa18.7■□□□□ 0.58
APH1B-207ENST00000559971 MROH7-TTC4A0A0A0MT08 1334 aa18.69■□□□□ 0.58
APH1B-207ENST00000559971 SPATA31A6Q5VVP1 1343 aa18.69■□□□□ 0.58
APH1B-207ENST00000559971 BTBD18B2RXH4 712 aa18.69■□□□□ 0.58
APH1B-207ENST00000559971 TNNT1P13805 278 aa18.69■□□□□ 0.58
APH1B-207ENST00000559971 KRT2P35908 639 aa18.69■□□□□ 0.58
APH1B-207ENST00000559971 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
APH1B-207ENST00000559971 FERMT2Q96AC1 680 aa18.69■□□□□ 0.58
APH1B-207ENST00000559971 TACC3Q9Y6A5 838 aa18.69■□□□□ 0.58
APH1B-207ENST00000559971 SCN7AQ01118 1682 aa18.69■□□□□ 0.58
APH1B-207ENST00000559971 TRIM75PA6NK02 468 aa18.68■□□□□ 0.58
APH1B-207ENST00000559971 NUTM2BA6NNL0 878 aaPredicted RBP18.68■□□□□ 0.58
APH1B-207ENST00000559971 NUTM2EB1AL46 878 aaPredicted RBP18.68■□□□□ 0.58
APH1B-207ENST00000559971 SMC2O95347 1197 aa18.68■□□□□ 0.58
APH1B-207ENST00000559971 HMGB2P26583 209 aaKnown RBP18.68■□□□□ 0.58
APH1B-207ENST00000559971 PDE4BQ07343 736 aa18.68■□□□□ 0.58
APH1B-207ENST00000559971 LRMPQ12912 555 aa18.68■□□□□ 0.58
APH1B-207ENST00000559971 CCDC144BQ3MJ40 725 aa18.68■□□□□ 0.58
APH1B-207ENST00000559971 NT5DC1Q5TFE4 455 aa18.68■□□□□ 0.58
APH1B-207ENST00000559971 NBPF5PQ86XG9 351 aaPredicted RBP18.68■□□□□ 0.58
APH1B-207ENST00000559971 NUTM2AQ8IVF1 878 aaPredicted RBP18.68■□□□□ 0.58
APH1B-207ENST00000559971 C17orf53Q8N3J3 647 aaPredicted RBP18.68■□□□□ 0.58
APH1B-207ENST00000559971 PSDA5PKW4 1024 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms