RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 RAB11FIP4Q86YS3 637 aa14.84□□□□□ -0.03
USP3-213ENST00000559711 AMOTL1Q8IY63 956 aa14.84□□□□□ -0.03
USP3-213ENST00000559711 FBXW7Q969H0 707 aa14.84□□□□□ -0.03
USP3-213ENST00000559711 ZSCAN16Q9H4T2 348 aaPredicted RBP14.84□□□□□ -0.03
USP3-213ENST00000559711 TTF2Q9UNY4 1162 aaKnown RBP14.84□□□□□ -0.03
USP3-213ENST00000559711 TNKSO95271 1327 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 DNM1Q05193 864 aaKnown RBP14.83□□□□□ -0.04
USP3-213ENST00000559711 RESTQ13127 1097 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 DACT2Q5SW24 774 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 FERMT3Q86UX7 667 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 MICU3Q86XE3 530 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 MAPKAPK5Q8IW41 473 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 RTKN2Q8IZC4 609 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 ENAHQ8N8S7 591 aaPredicted RBP14.83□□□□□ -0.04
USP3-213ENST00000559711 MXD3Q9BW11 206 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 KCNQ5Q9NR82 932 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 ORC3Q9UBD5 711 aaPredicted RBP14.83□□□□□ -0.04
USP3-213ENST00000559711 CNPY2Q9Y2B0 182 aa14.83□□□□□ -0.04
USP3-213ENST00000559711 TGFB2P61812 414 aa14.82□□□□□ -0.04
USP3-213ENST00000559711 PPP2R5BQ15173 497 aa14.82□□□□□ -0.04
USP3-213ENST00000559711 CCDC93Q567U6 631 aa14.82□□□□□ -0.04
USP3-213ENST00000559711 ZNF654Q8IZM8 581 aa14.82□□□□□ -0.04
USP3-213ENST00000559711 GPT2Q8TD30 523 aa14.82□□□□□ -0.04
USP3-213ENST00000559711 PSMD1Q99460 953 aa14.82□□□□□ -0.04
USP3-213ENST00000559711 FLT1P17948 1338 aa14.82□□□□□ -0.04
USP3-213ENST00000559711 USP17L3A6NCW0 530 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 USP17L4A6NCW7 530 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 MBD3O95983 291 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 RXRAP19793 462 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 PLCD1P51178 756 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 HDLBPQ00341 1268 aaKnown RBP14.81□□□□□ -0.04
USP3-213ENST00000559711 AOC3Q16853 763 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 CSPP1Q1MSJ5 1256 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 USP17L1Q7RTZ2 530 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 MYL10Q9BUA6 226 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 MTFR1LQ9H019 292 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 GZF1Q9H116 711 aaPredicted RBP14.81□□□□□ -0.04
USP3-213ENST00000559711 GDPD2Q9HCC8 539 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 CHD4Q14839 1912 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 CCDC196A0A1B0GTZ2 297 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 F8W031 263 aaPredicted RBP14.81□□□□□ -0.04
USP3-213ENST00000559711 PPFIA3O75145 1194 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 ZBTB7AO95365 584 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 POLR3DP05423 398 aaPredicted RBP14.81□□□□□ -0.04
USP3-213ENST00000559711 IFNAR1P17181 557 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 DEKP35659 375 aaKnown RBP14.81□□□□□ -0.04
USP3-213ENST00000559711 KRT85P78386 507 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 IFIT1BQ5T764 474 aaKnown RBP14.81□□□□□ -0.04
USP3-213ENST00000559711 FANCBQ8NB91 859 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 FBXO18Q8NFZ0 1043 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 TEKT1Q969V4 418 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 DYNLL2Q96FJ2 89 aa14.81□□□□□ -0.04
USP3-213ENST00000559711 POLD1P28340 1107 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 RTN1Q16799 776 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 FAM47AQ5JRC9 791 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 APOBEC3HQ6NTF7 200 aaKnown RBP14.8□□□□□ -0.04
USP3-213ENST00000559711 CCDC144CPQ8IYA2 1237 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 ANKS1AQ92625 1134 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 C8orf76Q96K31 380 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 VPS33BQ9H267 617 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 ZNF287Q9HBT7 754 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 TCP11L1Q9NUJ3 509 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 SAP30BPQ9UHR5 308 aaKnown RBP14.8□□□□□ -0.04
USP3-213ENST00000559711 STK36Q9NRP7 1315 aa14.8□□□□□ -0.04
USP3-213ENST00000559711 BAZ2AQ9UIF9 1905 aaKnown RBP14.79□□□□□ -0.04
USP3-213ENST00000559711 MYH2Q9UKX2 1941 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 TSPY2A6NKD2 308 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 PPIP5K2O43314 1243 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 WDHD1O75717 1129 aaPredicted RBP14.79□□□□□ -0.04
USP3-213ENST00000559711 IARSP41252 1262 aaKnown RBP14.79□□□□□ -0.04
USP3-213ENST00000559711 CRKP46108 304 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 SCNN1DP51172 638 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 CCDC178Q5BJE1 867 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 C16orf86Q6ZW13 317 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 CATIPQ7Z7H3 387 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 ZDHHC15Q96MV8 337 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 MKNK2Q9HBH9 465 aa14.79□□□□□ -0.04
USP3-213ENST00000559711 FIBPO43427 364 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 GADD45BO75293 160 aaPredicted RBP14.78□□□□□ -0.04
USP3-213ENST00000559711 DDAH1O94760 285 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 FMNL1O95466 1100 aaPredicted RBP14.78□□□□□ -0.04
USP3-213ENST00000559711 CALM1P0DP23 149 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 CALM2P0DP24 149 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 CALM3P0DP25 149 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 NCLP19338 710 aaKnown RBP14.78□□□□□ -0.04
USP3-213ENST00000559711 TFAP4Q01664 338 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 TROAPQ12815 778 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 SOGA3Q5TF21 947 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 RCSD1Q6JBY9 416 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 CDC42EP5Q6NZY7 148 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 FAM173BQ6P4H8 233 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 DGKHQ86XP1 1220 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 PHKBQ93100 1093 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 SCAND2PQ9GZW5 306 aaPredicted RBP14.78□□□□□ -0.04
USP3-213ENST00000559711 USP40Q9NVE5 1235 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
USP3-213ENST00000559711 ELP1O95163 1332 aa14.78□□□□□ -0.04
USP3-213ENST00000559711 YDJCA8MPS7 323 aa14.77□□□□□ -0.04
USP3-213ENST00000559711 RASA1P20936 1047 aa14.77□□□□□ -0.04
USP3-213ENST00000559711 CDK8P49336 464 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms