RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 USP17L8P0C7I0 530 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 ZSCAN22P10073 491 aaPredicted RBP12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 SETQ01105 290 aaPredicted RBP12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 ZSCAN16Q9H4T2 348 aaPredicted RBP12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 RNF181Q9P0P0 153 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 MAGEC2Q9UBF1 373 aaPredicted RBP12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 RIPOR2Q9Y4F9 1068 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 ATP10DQ9P241 1426 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 FSIP1Q8NA03 581 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 SCLT1Q96NL6 688 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 CRAMP1Q96RY5 1269 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 ZNF589Q86UQ0 364 aaPredicted RBP12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 MON2Q7Z3U7 1717 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 ECE2O60344 883 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 GNA11P29992 359 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 PTPN14Q15678 1187 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 FCHSD1Q86WN1 690 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 SMAP1Q8IYB5 467 aaPredicted RBP12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 LCORLQ8N3X6 602 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 TRERF1Q96PN7 1200 aa12.18□□□□□ -0.46
CARMIL3-202ENST00000559694 hCG_1642624A0A1W2PR95 340 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 CACNB3P54284 484 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 UVSSAQ2YD98 709 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 MPHOSPH6Q99547 160 aaKnown RBP12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 PLA2G12BQ9BX93 195 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 CAMTA1Q9Y6Y1 1673 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 BCL9O00512 1426 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 IDEP14735 1019 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 FAM84BQ96KN1 310 aaPredicted RBP12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 TNS2Q63HR2 1409 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 POTEAQ6S8J7 498 aa12.17□□□□□ -0.46
CARMIL3-202ENST00000559694 CSF1RP07333 972 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 GAS2L3Q86XJ1 694 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 UBN2Q6ZU65 1347 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 DPEP1P16444 411 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 FILIP1LQ4L180 1135 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 CNNM3Q8NE01 707 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 BBXQ8WY36 941 aaPredicted RBP12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 PHKBQ93100 1093 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 MARCKSP29966 332 aaPredicted RBP12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 ATG9AQ7Z3C6 839 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 TBC1D16Q8TBP0 767 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 CALML4Q96GE6 196 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 SERPINB13Q9UIV8 391 aa12.16□□□□□ -0.46
CARMIL3-202ENST00000559694 TRIM75PA6NK02 468 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 M0R2C6 588 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 MATR3P43243 847 aaKnown RBP eCLIP12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 MRPL12P52815 198 aaKnown RBP12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 KLHL10Q6JEL2 608 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 CKAP2LQ8IYA6 745 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 FAM177A1Q8N128 213 aaPredicted RBP12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 MAP4K1Q92918 833 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 UBA5Q9GZZ9 404 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 ATP6V0A2Q9Y487 856 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 PLSCR1O15162 318 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 CFAP100Q494V2 611 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 TDRD3Q9H7E2 651 aaKnown RBP12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 CYP2D7A0A087X1C5 515 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 TERF1P54274 439 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 IRX3P78415 501 aaPredicted RBP12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 MIGA2Q7L4E1 593 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 DACH1Q9UI36 760 aa12.15□□□□□ -0.46
CARMIL3-202ENST00000559694 SERPINC1P01008 464 aa12.15□□□□□ -0.47
CARMIL3-202ENST00000559694 ICA1Q05084 483 aa12.15□□□□□ -0.47
CARMIL3-202ENST00000559694 OTUD7BQ6GQQ9 843 aa12.15□□□□□ -0.47
CARMIL3-202ENST00000559694 LEKR1Q6ZMV7 388 aa12.15□□□□□ -0.47
CARMIL3-202ENST00000559694 ZNF654Q8IZM8 581 aa12.15□□□□□ -0.47
CARMIL3-202ENST00000559694 SMCR8Q8TEV9 937 aaPredicted RBP12.15□□□□□ -0.47
CARMIL3-202ENST00000559694 UBXN4Q92575 508 aa12.15□□□□□ -0.47
CARMIL3-202ENST00000559694 TNKSO95271 1327 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 CYP21A2P08686 494 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 ABCB5Q2M3G0 1257 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 NSMFQ6X4W1 530 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 GTPBP4Q9BZE4 634 aaKnown RBP12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 TM6SF1Q9BZW5 370 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 HOMER2Q9NSB8 354 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 DNM1Q05193 864 aaKnown RBP12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 SCARF1Q14162 830 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 SUPT20HL1Q3ZLR7 823 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 KIF18AQ8NI77 898 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 ACBD3Q9H3P7 528 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 DEXIO95424 95 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 SYT1P21579 422 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 KRT2P35908 639 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 SP4Q02446 784 aa12.14□□□□□ -0.47
CARMIL3-202ENST00000559694 CMTR1Q8N1G2 835 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms