RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 JAG2Q9Y219 1238 aa5.81□□□□□ -1.48
CASC4-210ENST00000559550 ZNF503-AS2A6NEH8 195 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 SORBS3O60504 671 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 EIF4EBP3O60516 100 aaPredicted RBP5.8□□□□□ -1.48
CASC4-210ENST00000559550 TSPAN15O95858 294 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 BMP6P22004 513 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 ARNTP27540 789 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 KRTAP1-1Q07627 177 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 MAP7Q14244 749 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 ZNF326Q5BKZ1 582 aaKnown RBP5.8□□□□□ -1.48
CASC4-210ENST00000559550 OGFOD3Q6PK18 319 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 MRS2Q9HD23 443 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 LMCD1Q9NZU5 365 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 VTI1BQ9UEU0 232 aa5.8□□□□□ -1.48
CASC4-210ENST00000559550 RBM47A0AV96 593 aaKnown RBP5.79□□□□□ -1.48
CASC4-210ENST00000559550 LRRC10BA6NIK2 292 aa5.79□□□□□ -1.48
CASC4-210ENST00000559550 DYNC1LI2O43237 492 aaPredicted RBP5.79□□□□□ -1.48
CASC4-210ENST00000559550 ZNF862O60290 1169 aa5.79□□□□□ -1.48
CASC4-210ENST00000559550 LIG1P18858 919 aa5.79□□□□□ -1.48
CASC4-210ENST00000559550 NME2P22392 152 aa5.79□□□□□ -1.48
CASC4-210ENST00000559550 RAP1GAPP47736 663 aa5.79□□□□□ -1.48
CASC4-210ENST00000559550 ZNF252P-AS1Q0IIN9 211 aa5.79□□□□□ -1.48
CASC4-210ENST00000559550 MRPL58Q14197 206 aaKnown RBP5.79□□□□□ -1.48
CASC4-210ENST00000559550 PDE3AQ14432 1141 aa5.79□□□□□ -1.48
CASC4-210ENST00000559550 LRRC56Q8IYG6 542 aaPredicted RBP5.79□□□□□ -1.48
CASC4-210ENST00000559550 CRELD1Q96HD1 420 aa5.79□□□□□ -1.48
CASC4-210ENST00000559550 WDR18Q9BV38 432 aa5.79□□□□□ -1.48
CASC4-210ENST00000559550 GSX1Q9H4S2 264 aaPredicted RBP5.79□□□□□ -1.48
CASC4-210ENST00000559550 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.78□□□□□ -1.48
CASC4-210ENST00000559550 AOC2O75106 756 aa5.78□□□□□ -1.48
CASC4-210ENST00000559550 CD96P40200 585 aa5.78□□□□□ -1.48
CASC4-210ENST00000559550 TAF1CQ15572 869 aaPredicted RBP5.78□□□□□ -1.48
CASC4-210ENST00000559550 CCDC85BQ15834 202 aaPredicted RBP5.78□□□□□ -1.48
CASC4-210ENST00000559550 AKAP4Q5JQC9 854 aa5.78□□□□□ -1.48
CASC4-210ENST00000559550 PCNX4Q63HM2 1172 aa5.78□□□□□ -1.48
CASC4-210ENST00000559550 MAP1SQ66K74 1059 aaPredicted RBP5.78□□□□□ -1.48
CASC4-210ENST00000559550 SV2BQ7L1I2 683 aa5.78□□□□□ -1.48
CASC4-210ENST00000559550 PLD6Q8N2A8 252 aaKnown RBP5.78□□□□□ -1.48
CASC4-210ENST00000559550 ZSCAN18Q8TBC5 510 aaPredicted RBP5.78□□□□□ -1.48
CASC4-210ENST00000559550 KCNB2Q92953 911 aa5.78□□□□□ -1.48
CASC4-210ENST00000559550 CBX8Q9HC52 389 aa5.78□□□□□ -1.48
CASC4-210ENST00000559550 FAM105AQ9NUU6 356 aa5.78□□□□□ -1.48
CASC4-210ENST00000559550 USP31Q70CQ4 1352 aa5.78□□□□□ -1.48
CASC4-210ENST00000559550 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.77□□□□□ -1.49
CASC4-210ENST00000559550 KRT1P04264 644 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 ZSCAN22P10073 491 aaPredicted RBP5.77□□□□□ -1.49
CASC4-210ENST00000559550 RAB6AP20340 208 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 MAP3K11Q16584 847 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 LDLRAD1Q5T700 205 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 FLAD1Q8NFF5 587 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 RAD18Q9NS91 495 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 CACNA2D2Q9NY47 1150 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 PODXL2Q9NZ53 605 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 CRIM1Q9NZV1 1036 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 VAV3Q9UKW4 847 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 PPP1R9AQ9ULJ8 1098 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 CCDC9Q9Y3X0 531 aaKnown RBP5.77□□□□□ -1.49
CASC4-210ENST00000559550 PCDHGC5Q9Y5F6 944 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 U3KQE9 123 aa5.77□□□□□ -1.49
CASC4-210ENST00000559550 F6X3S4 739 aa5.76□□□□□ -1.49
CASC4-210ENST00000559550 ST13P50502 369 aaKnown RBP5.76□□□□□ -1.49
CASC4-210ENST00000559550 PRKCQQ04759 706 aa5.76□□□□□ -1.49
CASC4-210ENST00000559550 PTPN11Q06124 597 aaPredicted RBP5.76□□□□□ -1.49
CASC4-210ENST00000559550 MLANAQ16655 118 aa5.76□□□□□ -1.49
CASC4-210ENST00000559550 HP1BP3Q5SSJ5 553 aaPredicted RBP5.76□□□□□ -1.49
CASC4-210ENST00000559550 TTBK2Q6IQ55 1244 aa5.76□□□□□ -1.49
CASC4-210ENST00000559550 PI4K2BQ8TCG2 481 aa5.76□□□□□ -1.49
CASC4-210ENST00000559550 NETO1Q8TDF5 533 aa5.76□□□□□ -1.49
CASC4-210ENST00000559550 GPBAR1Q8TDU6 330 aa5.76□□□□□ -1.49
CASC4-210ENST00000559550 KRT82Q9NSB4 513 aa5.76□□□□□ -1.49
CASC4-210ENST00000559550 LIG3P49916 1009 aa5.75□□□□□ -1.49
CASC4-210ENST00000559550 KIF4BQ2VIQ3 1234 aa5.75□□□□□ -1.49
CASC4-210ENST00000559550 LLGL2Q6P1M3 1020 aa5.75□□□□□ -1.49
CASC4-210ENST00000559550 ZSWIM9Q86XI8 627 aa5.75□□□□□ -1.49
CASC4-210ENST00000559550 EMILIN2Q9BXX0 1053 aa5.75□□□□□ -1.49
CASC4-210ENST00000559550 FAM53CQ9NYF3 392 aa5.75□□□□□ -1.49
CASC4-210ENST00000559550 AP4E1Q9UPM8 1137 aa5.75□□□□□ -1.49
CASC4-210ENST00000559550 SAMM50Q9Y512 469 aa5.75□□□□□ -1.49
CASC4-210ENST00000559550 PCDHB5Q9Y5E4 795 aa5.75□□□□□ -1.49
CASC4-210ENST00000559550 SYNGAP1Q96PV0 1343 aa5.74□□□□□ -1.49
CASC4-210ENST00000559550 UNCXA6NJT0 531 aa5.74□□□□□ -1.49
CASC4-210ENST00000559550 TMPRSS2O15393 492 aa5.74□□□□□ -1.49
CASC4-210ENST00000559550 DYMQ7RTS9 669 aa5.74□□□□□ -1.49
CASC4-210ENST00000559550 AMIGO3Q86WK7 504 aa5.74□□□□□ -1.49
CASC4-210ENST00000559550 GAL3ST3Q96A11 431 aa5.74□□□□□ -1.49
CASC4-210ENST00000559550 NOC4LQ9BVI4 516 aaKnown RBP5.74□□□□□ -1.49
CASC4-210ENST00000559550 BACH2Q9BYV9 841 aa5.74□□□□□ -1.49
CASC4-210ENST00000559550 TLR6Q9Y2C9 796 aa5.74□□□□□ -1.49
CASC4-210ENST00000559550 TRIM37O94972 964 aa5.73□□□□□ -1.49
CASC4-210ENST00000559550 TFE3P19532 575 aaPredicted RBP5.73□□□□□ -1.49
CASC4-210ENST00000559550 LRRC14Q15048 493 aa5.73□□□□□ -1.49
CASC4-210ENST00000559550 ZC3H12AQ5D1E8 599 aaKnown RBP5.73□□□□□ -1.49
CASC4-210ENST00000559550 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.73□□□□□ -1.49
CASC4-210ENST00000559550 AGMOQ6ZNB7 445 aa5.73□□□□□ -1.49
CASC4-210ENST00000559550 FAM181AQ8N9Y4 354 aa5.73□□□□□ -1.49
CASC4-210ENST00000559550 ACSBG1Q96GR2 724 aa5.73□□□□□ -1.49
CASC4-210ENST00000559550 PPP1R16BQ96T49 567 aa5.73□□□□□ -1.49
CASC4-210ENST00000559550 COPRSQ9NQ92 184 aa5.73□□□□□ -1.49
CASC4-210ENST00000559550 DISC1Q9NRI5 854 aa5.73□□□□□ -1.49
CASC4-210ENST00000559550 KIAA1522Q9P206 1035 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms