RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 DYNLL2Q96FJ2 89 aa14.85□□□□□ -0.03
GABPB1-208ENST00000558970 TRIM34Q9BYJ4 488 aa14.85□□□□□ -0.03
GABPB1-208ENST00000558970 NACAP1Q9BZK3 213 aa14.85□□□□□ -0.03
GABPB1-208ENST00000558970 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
GABPB1-208ENST00000558970 MKRN1Q9UHC7 482 aaKnown RBP14.85□□□□□ -0.03
GABPB1-208ENST00000558970 PAPPA2Q9BXP8 1791 aa14.85□□□□□ -0.03
GABPB1-208ENST00000558970 PLCD1P51178 756 aa14.84□□□□□ -0.03
GABPB1-208ENST00000558970 HAND2P61296 217 aa14.84□□□□□ -0.03
GABPB1-208ENST00000558970 SUPT20HL1Q3ZLR7 823 aa14.84□□□□□ -0.03
GABPB1-208ENST00000558970 KIAA1211Q6ZU35 1233 aa14.84□□□□□ -0.03
GABPB1-208ENST00000558970 PASKQ96RG2 1323 aa14.84□□□□□ -0.03
GABPB1-208ENST00000558970 ATRNL1Q5VV63 1379 aa14.84□□□□□ -0.03
GABPB1-208ENST00000558970 COL2A1P02458 1487 aaPredicted RBP14.83□□□□□ -0.03
GABPB1-208ENST00000558970 CTDSPL2Q05D32 466 aa14.83□□□□□ -0.04
GABPB1-208ENST00000558970 DHX36Q9H2U1 1008 aaKnown RBP14.83□□□□□ -0.04
GABPB1-208ENST00000558970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.83□□□□□ -0.04
GABPB1-208ENST00000558970 ARPP21Q9UBL0 812 aaPredicted RBP14.83□□□□□ -0.04
GABPB1-208ENST00000558970 ANGEL1Q9UNK9 670 aaKnown RBP14.83□□□□□ -0.04
GABPB1-208ENST00000558970 NPM3O75607 178 aaKnown RBP14.82□□□□□ -0.04
GABPB1-208ENST00000558970 FGAP02671 866 aa14.82□□□□□ -0.04
GABPB1-208ENST00000558970 CST9Q5W186 159 aa14.82□□□□□ -0.04
GABPB1-208ENST00000558970 TTC6Q86TZ1 520 aa14.82□□□□□ -0.04
GABPB1-208ENST00000558970 SLC44A5Q8NCS7 719 aa14.82□□□□□ -0.04
GABPB1-208ENST00000558970 GBA2Q9HCG7 927 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-208ENST00000558970 UBE2Q2LH0YL09 131 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 CAPN15O75808 1086 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 PPARAQ07869 468 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 C12orf60Q5U649 245 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 DCAF15Q66K64 600 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 GIMAP6Q6P9H5 292 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 C2orf69Q8N8R5 385 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 WRNIP1Q96S55 665 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 DSCC1Q9BVC3 393 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 LSG1Q9H089 658 aaKnown RBP14.81□□□□□ -0.04
GABPB1-208ENST00000558970 DNAJC18Q9H819 358 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 PI4KBQ9UBF8 816 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 SERPINB13Q9UIV8 391 aa14.81□□□□□ -0.04
GABPB1-208ENST00000558970 ABT1Q9ULW3 272 aaKnown RBP14.81□□□□□ -0.04
GABPB1-208ENST00000558970 PPP1R12BO60237 982 aaPredicted RBP14.8□□□□□ -0.04
GABPB1-208ENST00000558970 PRDM1O75626 825 aa14.8□□□□□ -0.04
GABPB1-208ENST00000558970 GDF11O95390 407 aa14.8□□□□□ -0.04
GABPB1-208ENST00000558970 HOOK2Q96ED9 719 aa14.8□□□□□ -0.04
GABPB1-208ENST00000558970 ZNF341Q9BYN7 854 aa14.8□□□□□ -0.04
GABPB1-208ENST00000558970 INCENPQ9NQS7 918 aa14.8□□□□□ -0.04
GABPB1-208ENST00000558970 TOMM22Q9NS69 142 aa14.8□□□□□ -0.04
GABPB1-208ENST00000558970 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.8□□□□□ -0.04
GABPB1-208ENST00000558970 RBM8AQ9Y5S9 174 aaKnown RBP14.8□□□□□ -0.04
GABPB1-208ENST00000558970 USP2O75604 605 aaPredicted RBP14.79□□□□□ -0.04
GABPB1-208ENST00000558970 INPP5BP32019 993 aa14.79□□□□□ -0.04
GABPB1-208ENST00000558970 IREB2P48200 963 aaKnown RBP14.79□□□□□ -0.04
GABPB1-208ENST00000558970 GRM1Q13255 1194 aa14.79□□□□□ -0.04
GABPB1-208ENST00000558970 SHROOM1Q2M3G4 852 aaPredicted RBP14.79□□□□□ -0.04
GABPB1-208ENST00000558970 C8orf34Q49A92 452 aa14.79□□□□□ -0.04
GABPB1-208ENST00000558970 RRP12Q5JTH9 1297 aaKnown RBP14.79□□□□□ -0.04
GABPB1-208ENST00000558970 PAXIP1Q6ZW49 1069 aaPredicted RBP14.79□□□□□ -0.04
GABPB1-208ENST00000558970 ARMC9Q7Z3E5 817 aa14.79□□□□□ -0.04
GABPB1-208ENST00000558970 ZKSCAN4Q969J2 545 aaPredicted RBP14.79□□□□□ -0.04
GABPB1-208ENST00000558970 PRDM10Q9NQV6 1147 aa14.79□□□□□ -0.04
GABPB1-208ENST00000558970 PHIPQ8WWQ0 1821 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 TMEM88BA6NKF7 163 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 MPHOSPH10O00566 681 aaKnown RBP14.78□□□□□ -0.04
GABPB1-208ENST00000558970 ZNF213O14771 459 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 HUNKP57058 714 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 ALX1Q15699 326 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 IMMTQ16891 758 aaKnown RBP14.78□□□□□ -0.04
GABPB1-208ENST00000558970 SBK1Q52WX2 424 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 TBC1D10CQ8IV04 446 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 CLMNQ96JQ2 1002 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 EHD4Q9H223 541 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 HERC5Q9UII4 1024 aaKnown RBP14.78□□□□□ -0.04
GABPB1-208ENST00000558970 MYH4Q9Y623 1939 aa14.78□□□□□ -0.04
GABPB1-208ENST00000558970 ROBO3Q96MS0 1386 aa14.77□□□□□ -0.04
GABPB1-208ENST00000558970 ZMYM6O95789 1325 aa14.77□□□□□ -0.04
GABPB1-208ENST00000558970 REC8O95072 547 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 SEC24BO95487 1268 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 SHMT1P34896 483 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 CDK8P49336 464 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 MKRN3Q13064 507 aaKnown RBP14.77□□□□□ -0.05
GABPB1-208ENST00000558970 RRP1BQ14684 758 aaKnown RBP14.77□□□□□ -0.05
GABPB1-208ENST00000558970 C16orf86Q6ZW13 317 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 CCDC84Q86UT8 332 aaPredicted RBP14.77□□□□□ -0.05
GABPB1-208ENST00000558970 FOXP4Q8IVH2 680 aaPredicted RBP14.77□□□□□ -0.05
GABPB1-208ENST00000558970 MAP4K1Q92918 833 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 NBPF3Q9H094 633 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 ELP3Q9H9T3 547 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 MKNK2Q9HBH9 465 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 CTNNA3Q9UI47 895 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 TACC3Q9Y6A5 838 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 TAF6LQ9Y6J9 622 aa14.77□□□□□ -0.05
GABPB1-208ENST00000558970 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
GABPB1-208ENST00000558970 NEDD4P46934 1319 aa14.76□□□□□ -0.05
GABPB1-208ENST00000558970 PHF20L1A8MW92 1017 aa14.76□□□□□ -0.05
GABPB1-208ENST00000558970 SLC3A2P08195 630 aaKnown RBP14.76□□□□□ -0.05
GABPB1-208ENST00000558970 GABPAQ06546 454 aa14.76□□□□□ -0.05
GABPB1-208ENST00000558970 VGLL4Q14135 290 aa14.76□□□□□ -0.05
GABPB1-208ENST00000558970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.05
GABPB1-208ENST00000558970 CSADQ9Y600 493 aa14.76□□□□□ -0.05
GABPB1-208ENST00000558970 GREB1LQ9C091 1923 aaPredicted RBP14.75□□□□□ -0.05
GABPB1-208ENST00000558970 TBC1D12O60347 775 aa14.75□□□□□ -0.05
GABPB1-208ENST00000558970 CYP21A2P08686 494 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms