RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SERPINA10Q9UK55 444 aa7.47□□□□□ -1.21
CTDSPL2-204ENST00000558966 RCAN3Q9UKA8 241 aa7.47□□□□□ -1.21
CTDSPL2-204ENST00000558966 SLC27A5Q9Y2P5 690 aa7.47□□□□□ -1.21
CTDSPL2-204ENST00000558966 NDUFB9Q9Y6M9 179 aa7.47□□□□□ -1.21
CTDSPL2-204ENST00000558966 AOX1Q06278 1338 aa7.47□□□□□ -1.21
CTDSPL2-204ENST00000558966 HRO43593 1189 aa7.46□□□□□ -1.22
CTDSPL2-204ENST00000558966 ADORA1P30542 326 aa7.46□□□□□ -1.22
CTDSPL2-204ENST00000558966 CHAF1AQ13111 956 aaPredicted RBP7.46□□□□□ -1.22
CTDSPL2-204ENST00000558966 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
CTDSPL2-204ENST00000558966 PAPPA2Q9BXP8 1791 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 WDR33Q9C0J8 1336 aaKnown RBP7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 ACTN4O43707 911 aaKnown RBP7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 PHKA1P46020 1223 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 ATP8B2P98198 1209 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 TFCP2Q12800 502 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 IRF5Q13568 498 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 DLGAP5Q15398 846 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 CFAP100Q494V2 611 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 CYP4F22Q6NT55 531 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 SSH3Q8TE77 659 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 HHIPL1Q96JK4 782 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 CAPNS2Q96L46 248 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 TTF2Q9UNY4 1162 aaKnown RBP7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 A0A1B0GUL7 405 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 GOLGA8CPA6NN73 597 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 GPR37L1O60883 481 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 FRAT2O75474 233 aaPredicted RBP7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 HSPA1AP0DMV8 641 aaKnown RBP7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 HSPA1BP0DMV9 641 aaKnown RBP7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 TIMM10P62072 90 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 MVPQ14764 893 aaKnown RBP7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 PRAMEF18Q5VWM3 479 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 TBC1D22AQ8WUA7 517 aa7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 PRMT6Q96LA8 375 aaPredicted RBP7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 GBA2Q9HCG7 927 aaPredicted RBP7.45□□□□□ -1.22
CTDSPL2-204ENST00000558966 CLRN2A0PK11 232 aa7.44□□□□□ -1.22
CTDSPL2-204ENST00000558966 HUNKP57058 714 aa7.44□□□□□ -1.22
CTDSPL2-204ENST00000558966 CCDC102BQ68D86 513 aa7.44□□□□□ -1.22
CTDSPL2-204ENST00000558966 CEP85Q6P2H3 762 aa7.44□□□□□ -1.22
CTDSPL2-204ENST00000558966 APOBEC3FQ8IUX4 373 aaKnown RBP7.44□□□□□ -1.22
CTDSPL2-204ENST00000558966 CALR3Q96L12 384 aaKnown RBP7.44□□□□□ -1.22
CTDSPL2-204ENST00000558966 SSC5DA1L4H1 1573 aa7.44□□□□□ -1.22
CTDSPL2-204ENST00000558966 AOC2O75106 756 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 ECE1P42892 770 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 CRKP46108 304 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 RBM5P52756 815 aaKnown RBP eCLIP7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 GRM1Q13255 1194 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 G3BP1Q13283 466 aaKnown RBP eCLIP7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 RASGRF1Q13972 1273 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 C20orf194Q5TEA3 1177 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 MOB2Q70IA6 237 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 RETREG3Q86VR2 466 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 C2orf69Q8N8R5 385 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 ANKK1Q8NFD2 765 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 WDR66Q8TBY9 1149 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 GLMNQ92990 594 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 XAGE2Q96GT9 111 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 HPS5Q9UPZ3 1129 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 AKAP2Q9Y2D5 859 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 PRDX5P30044 214 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 PPP4CP60510 307 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 HDLBPQ00341 1268 aaKnown RBP7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 NR6A1Q15406 480 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 BLOC1S3Q6QNY0 202 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 RNF19BQ6ZMZ0 732 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 DEFB129Q9H1M3 183 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 TDRD3Q9H7E2 651 aaKnown RBP7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 VEZTQ9HBM0 779 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 WBP1LQ9NX94 342 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 ZNF70Q9UC06 446 aaPredicted RBP7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 SUGT1Q9Y2Z0 365 aa7.43□□□□□ -1.22
CTDSPL2-204ENST00000558966 SALL1Q9NSC2 1324 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 SOWAHBA6NEL2 793 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 FAM155AB1AL88 458 aaPredicted RBP7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 FOXN1O15353 648 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 MYO1BO43795 1136 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 SURF6O75683 361 aaKnown RBP7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 FKBP1BP68106 108 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 RGMBQ6NW40 437 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 TEKT1Q969V4 418 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 YTHDC1Q96MU7 727 aaKnown RBP7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 ZDHHC15Q96MV8 337 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 NEUROD6Q96NK8 337 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 ZIC5Q96T25 663 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 ZBTB40Q9NUA8 1239 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 GNL3LQ9NVN8 582 aaKnown RBP7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 DENND2AQ9ULE3 1009 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 DDX19BQ9UMR2 479 aa7.42□□□□□ -1.22
CTDSPL2-204ENST00000558966 MAST3O60307 1309 aa7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 PDS5AQ29RF7 1337 aaKnown RBP7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 AKAP11Q9UKA4 1901 aa7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 MYH2Q9UKX2 1941 aa7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 ARID4AP29374 1257 aaPredicted RBP7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 VAC14Q08AM6 782 aa7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 PDE3AQ14432 1141 aa7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 RASA3Q14644 834 aa7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 TNNI3KQ59H18 835 aa7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 APOBEC3HQ6NTF7 200 aaKnown RBP7.41□□□□□ -1.22
CTDSPL2-204ENST00000558966 PI16Q6UXB8 463 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms