RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 NLRP8Q86W28 1048 aa13.11□□□□□ -0.31
MARK3-213ENST00000558611 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
MARK3-213ENST00000558611 BRD7Q9NPI1 651 aa13.11□□□□□ -0.31
MARK3-213ENST00000558611 SMG6Q86US8 1419 aaKnown RBP13.11□□□□□ -0.31
MARK3-213ENST00000558611 NHSQ6T4R5 1651 aa13.11□□□□□ -0.31
MARK3-213ENST00000558611 WASHC2AQ641Q2 1341 aa13.11□□□□□ -0.31
MARK3-213ENST00000558611 INSRP06213 1382 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 A0A1W2PP55 124 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 TNFRSF10AO00220 468 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 KCNQ4P56696 695 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 PRR20EP86478 221 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 PRR20CP86479 221 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 PRR20DP86480 221 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 PRR20BP86481 221 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 PRR20AP86496 221 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 FAM182BQ5T319 152 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 CKAP2LQ8IYA6 745 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 OVOS2A0A0G2JMS6 1433 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
MARK3-213ENST00000558611 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
MARK3-213ENST00000558611 NFE2L2Q16236 605 aa13.09□□□□□ -0.31
MARK3-213ENST00000558611 DDB1Q16531 1140 aa13.09□□□□□ -0.31
MARK3-213ENST00000558611 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
MARK3-213ENST00000558611 DOT1LQ8TEK3 1739 aa13.09□□□□□ -0.31
MARK3-213ENST00000558611 LTV1Q96GA3 475 aaPredicted RBP13.09□□□□□ -0.31
MARK3-213ENST00000558611 NUP188Q5SRE5 1749 aa13.08□□□□□ -0.32
MARK3-213ENST00000558611 MAP3K10Q02779 954 aa13.08□□□□□ -0.32
MARK3-213ENST00000558611 PEAR1Q5VY43 1037 aaPredicted RBP13.08□□□□□ -0.32
MARK3-213ENST00000558611 SPNS2Q8IVW8 549 aa13.08□□□□□ -0.32
MARK3-213ENST00000558611 TMEM74Q96NL1 305 aa13.08□□□□□ -0.32
MARK3-213ENST00000558611 ADAMTS1Q9UHI8 967 aa13.08□□□□□ -0.32
MARK3-213ENST00000558611 KNSTRNQ9Y448 316 aa13.08□□□□□ -0.32
MARK3-213ENST00000558611 BTAF1O14981 1849 aa13.08□□□□□ -0.32
MARK3-213ENST00000558611 VIRMAQ69YN4 1812 aaKnown RBP13.07□□□□□ -0.32
MARK3-213ENST00000558611 RHOQP17081 205 aa13.07□□□□□ -0.32
MARK3-213ENST00000558611 FAM196AQ6ZSG2 479 aa13.07□□□□□ -0.32
MARK3-213ENST00000558611 SSBP05455 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
MARK3-213ENST00000558611 IL2RBP14784 551 aa13.06□□□□□ -0.32
MARK3-213ENST00000558611 EIF4A3P38919 411 aaKnown RBP13.06□□□□□ -0.32
MARK3-213ENST00000558611 SV2BQ7L1I2 683 aa13.06□□□□□ -0.32
MARK3-213ENST00000558611 OR13H1Q8NG92 308 aa13.06□□□□□ -0.32
MARK3-213ENST00000558611 ZFYVE1Q9HBF4 777 aa13.06□□□□□ -0.32
MARK3-213ENST00000558611 SALL4Q9UJQ4 1053 aa13.06□□□□□ -0.32
MARK3-213ENST00000558611 STRIP2Q9ULQ0 834 aa13.06□□□□□ -0.32
MARK3-213ENST00000558611 MEGF6O75095 1541 aa13.06□□□□□ -0.32
MARK3-213ENST00000558611 BCL9O00512 1426 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 NCAPD2Q15021 1401 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 ITGB4P16144 1822 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 TTLL8A6PVC2 850 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 PHF20L1A8MW92 1017 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 GBP2P32456 591 aaPredicted RBP13.05□□□□□ -0.32
MARK3-213ENST00000558611 FCGRTP55899 365 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 COL9A2Q14055 689 aaPredicted RBP13.05□□□□□ -0.32
MARK3-213ENST00000558611 CTC1Q2NKJ3 1217 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 HSP90AB2PQ58FF8 381 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 C6orf118Q5T5N4 469 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 EGFLAMQ63HQ2 1017 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 MRPL14Q6P1L8 145 aaKnown RBP13.05□□□□□ -0.32
MARK3-213ENST00000558611 ZNF662Q6ZS27 426 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 PGBD3Q8N328 593 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 OXCT2Q9BYC2 517 aaPredicted RBP13.05□□□□□ -0.32
MARK3-213ENST00000558611 ZCCHC2Q9C0B9 1178 aaKnown RBP13.05□□□□□ -0.32
MARK3-213ENST00000558611 KCNQ5Q9NR82 932 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 LATS2Q9NRM7 1088 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 POLKQ9UBT6 870 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 KCNH4Q9UQ05 1017 aa13.05□□□□□ -0.32
MARK3-213ENST00000558611 TMEM238LA0A1B0GVL6 79 aa13.04□□□□□ -0.32
MARK3-213ENST00000558611 EXOC5O00471 708 aa13.04□□□□□ -0.32
MARK3-213ENST00000558611 F11P03951 625 aa13.04□□□□□ -0.32
MARK3-213ENST00000558611 CYP2E1P05181 493 aaPredicted RBP13.04□□□□□ -0.32
MARK3-213ENST00000558611 TNNT2P45379 298 aaPredicted RBP13.04□□□□□ -0.32
MARK3-213ENST00000558611 NFX1Q12986 1120 aaKnown RBP13.04□□□□□ -0.32
MARK3-213ENST00000558611 MKL1Q969V6 931 aa13.04□□□□□ -0.32
MARK3-213ENST00000558611 NT5C1AQ9BXI3 368 aa13.04□□□□□ -0.32
MARK3-213ENST00000558611 ABCB6Q9NP58 842 aa13.04□□□□□ -0.32
MARK3-213ENST00000558611 KANSL3Q9P2N6 904 aa13.04□□□□□ -0.32
MARK3-213ENST00000558611 DYRK1BQ9Y463 629 aa13.04□□□□□ -0.32
MARK3-213ENST00000558611 SASH3O75995 380 aa13.03□□□□□ -0.32
MARK3-213ENST00000558611 TRIM37O94972 964 aa13.03□□□□□ -0.32
MARK3-213ENST00000558611 NASPP49321 788 aaPredicted RBP13.03□□□□□ -0.32
MARK3-213ENST00000558611 CCINQ13939 588 aa13.03□□□□□ -0.32
MARK3-213ENST00000558611 BMS1Q14692 1282 aaKnown RBP13.03□□□□□ -0.32
MARK3-213ENST00000558611 MORC1Q86VD1 984 aa13.03□□□□□ -0.32
MARK3-213ENST00000558611 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
MARK3-213ENST00000558611 RUBCNLQ9H714 662 aa13.03□□□□□ -0.32
MARK3-213ENST00000558611 LIN7BQ9HAP6 207 aa13.03□□□□□ -0.32
MARK3-213ENST00000558611 NPC1L1Q9UHC9 1359 aa13.03□□□□□ -0.32
MARK3-213ENST00000558611 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.32
MARK3-213ENST00000558611 MINDY4BA8MYZ0 360 aa13.02□□□□□ -0.33
MARK3-213ENST00000558611 BAG6P46379 1132 aa13.02□□□□□ -0.33
MARK3-213ENST00000558611 SERINC3Q13530 473 aa13.02□□□□□ -0.33
MARK3-213ENST00000558611 LBRQ14739 615 aaKnown RBP13.02□□□□□ -0.33
MARK3-213ENST00000558611 DTHD1Q6ZMT9 781 aa13.02□□□□□ -0.33
MARK3-213ENST00000558611 DEFB132Q7Z7B7 95 aa13.02□□□□□ -0.33
MARK3-213ENST00000558611 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.33
MARK3-213ENST00000558611 ZNF296Q8WUU4 475 aaPredicted RBP13.02□□□□□ -0.33
MARK3-213ENST00000558611 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
MARK3-213ENST00000558611 EAF1Q96JC9 268 aaPredicted RBP13.02□□□□□ -0.33
MARK3-213ENST00000558611 TRIM56Q9BRZ2 755 aaKnown RBP13.02□□□□□ -0.33
MARK3-213ENST00000558611 ZNF408Q9H9D4 720 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms