RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 PLA2G4DQ86XP0 818 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 FMR1NBQ8N0W7 255 aaPredicted RBP17.6■□□□□ 0.41
AP4E1-202ENST00000558439 BLZF1Q9H2G9 400 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 OGFRQ9NZT2 677 aa17.6■□□□□ 0.41
AP4E1-202ENST00000558439 SEC63Q9UGP8 760 aaKnown RBP17.6■□□□□ 0.41
AP4E1-202ENST00000558439 TNKSO95271 1327 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 SH2B2O14492 632 aaPredicted RBP17.59■□□□□ 0.41
AP4E1-202ENST00000558439 ERLIN1O75477 346 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 TSPY3P0CV98 308 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 TSPY8P0CW00 308 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 LCORLQ8N3X6 602 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 CYP2D7A0A087X1C5 515 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 KIF28PB7ZC32 967 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 CCDC175P0C221 793 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 LONRF3Q496Y0 759 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 IGSF22Q8N9C0 903 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 FUCA2Q9BTY2 467 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 GOLGA6L9A6NEM1 432 aa17.59■□□□□ 0.41
AP4E1-202ENST00000558439 MTIF2P46199 727 aaKnown RBP17.59■□□□□ 0.41
AP4E1-202ENST00000558439 MB21D2Q8IYB1 491 aaPredicted RBP17.59■□□□□ 0.41
AP4E1-202ENST00000558439 CDC27P30260 824 aa17.58■□□□□ 0.41
AP4E1-202ENST00000558439 EVCP57679 992 aa17.58■□□□□ 0.41
AP4E1-202ENST00000558439 FEZ1Q99689 392 aa17.58■□□□□ 0.41
AP4E1-202ENST00000558439 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.58■□□□□ 0.41
AP4E1-202ENST00000558439 SPTLC3Q9NUV7 552 aa17.58■□□□□ 0.41
AP4E1-202ENST00000558439 MPHOSPH10O00566 681 aaKnown RBP17.58■□□□□ 0.41
AP4E1-202ENST00000558439 CHRNDQ07001 517 aa17.58■□□□□ 0.41
AP4E1-202ENST00000558439 MCM6Q14566 821 aa17.58■□□□□ 0.41
AP4E1-202ENST00000558439 ZNF569Q5MCW4 686 aa17.58■□□□□ 0.41
AP4E1-202ENST00000558439 ACBD3Q9H3P7 528 aa17.58■□□□□ 0.41
AP4E1-202ENST00000558439 TCP11L1Q9NUJ3 509 aa17.58■□□□□ 0.41
AP4E1-202ENST00000558439 RTL9Q8NET4 1388 aa17.58■□□□□ 0.4
AP4E1-202ENST00000558439 FDPSP14324 419 aaKnown RBP17.58■□□□□ 0.4
AP4E1-202ENST00000558439 CCDC178Q5BJE1 867 aa17.58■□□□□ 0.4
AP4E1-202ENST00000558439 ISCA1Q9BUE6 129 aa17.58■□□□□ 0.4
AP4E1-202ENST00000558439 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.58■□□□□ 0.4
AP4E1-202ENST00000558439 C6orf229H3BNL8 230 aa17.58■□□□□ 0.4
AP4E1-202ENST00000558439 SMAP1Q8IYB5 467 aaPredicted RBP17.58■□□□□ 0.4
AP4E1-202ENST00000558439 IQUBQ8NA54 791 aa17.58■□□□□ 0.4
AP4E1-202ENST00000558439 MLKLQ8NB16 471 aa17.58■□□□□ 0.4
AP4E1-202ENST00000558439 STRBPQ96SI9 672 aaKnown RBP17.58■□□□□ 0.4
AP4E1-202ENST00000558439 CTNND2Q9UQB3 1225 aa17.58■□□□□ 0.4
AP4E1-202ENST00000558439 C1orf167Q5SNV9 1468 aa17.57■□□□□ 0.4
AP4E1-202ENST00000558439 PARP10Q53GL7 1025 aa17.57■□□□□ 0.4
AP4E1-202ENST00000558439 AKR1B15C9JRZ8 316 aaPredicted RBP17.57■□□□□ 0.4
AP4E1-202ENST00000558439 IQCB1Q15051 598 aa17.57■□□□□ 0.4
AP4E1-202ENST00000558439 ZSCAN29Q8IWY8 852 aaPredicted RBP17.57■□□□□ 0.4
AP4E1-202ENST00000558439 BMP15O95972 392 aa17.56■□□□□ 0.4
AP4E1-202ENST00000558439 TTC38Q5R3I4 469 aa17.56■□□□□ 0.4
AP4E1-202ENST00000558439 AXDND1Q5T1B0 1012 aaPredicted RBP17.56■□□□□ 0.4
AP4E1-202ENST00000558439 EEF2KMTQ96G04 330 aa17.56■□□□□ 0.4
AP4E1-202ENST00000558439 F8W031 263 aaPredicted RBP17.56■□□□□ 0.4
AP4E1-202ENST00000558439 DYNLL1P63167 89 aaKnown RBP17.56■□□□□ 0.4
AP4E1-202ENST00000558439 GPIHBP1Q8IV16 184 aa17.56■□□□□ 0.4
AP4E1-202ENST00000558439 SENP2Q9HC62 589 aa17.56■□□□□ 0.4
AP4E1-202ENST00000558439 NEDD4P46934 1319 aa17.56■□□□□ 0.4
AP4E1-202ENST00000558439 TRIM21P19474 475 aaKnown RBP17.56■□□□□ 0.4
AP4E1-202ENST00000558439 RBM5P52756 815 aaKnown RBP eCLIP17.56■□□□□ 0.4
AP4E1-202ENST00000558439 SMYD4Q8IYR2 804 aaPredicted RBP17.56■□□□□ 0.4
AP4E1-202ENST00000558439 ARFGAP3Q9NP61 516 aa17.56■□□□□ 0.4
AP4E1-202ENST00000558439 SAP30BPQ9UHR5 308 aaKnown RBP17.56■□□□□ 0.4
AP4E1-202ENST00000558439 BAG3O95817 575 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 SUSD4Q5VX71 490 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 RUFY1Q96T51 708 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 PCDHB6Q9Y5E3 794 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 CDC25BP30305 580 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 UBXN1Q04323 297 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 GUCA1BQ9UMX6 200 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 WDHD1O75717 1129 aaPredicted RBP17.55■□□□□ 0.4
AP4E1-202ENST00000558439 ETF1P62495 437 aaKnown RBP17.55■□□□□ 0.4
AP4E1-202ENST00000558439 PPP1R13BQ96KQ4 1090 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 CTAGE1Q96RT6 745 aa17.55■□□□□ 0.4
AP4E1-202ENST00000558439 ARHGAP6O43182 974 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 CALM1P0DP23 149 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 CALM2P0DP24 149 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 CALM3P0DP25 149 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 DHX40Q8IX18 779 aaKnown RBP17.54■□□□□ 0.4
AP4E1-202ENST00000558439 CSRNP2Q9H175 543 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 RHOXF2BP0C7M4 288 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 HIBADHP31937 336 aaKnown RBP17.54■□□□□ 0.4
AP4E1-202ENST00000558439 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
AP4E1-202ENST00000558439 MAPK8IP2Q13387 824 aaPredicted RBP17.54■□□□□ 0.4
AP4E1-202ENST00000558439 CCDC181Q5TID7 509 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 SPECC1LQ69YQ0 1117 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 CCDC148Q8NFR7 591 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 RHOXF2Q9BQY4 288 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 RPGRQ92834 1020 aaKnown RBP17.54■□□□□ 0.4
AP4E1-202ENST00000558439 ERCC3P19447 782 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 RFC4P35249 363 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 NAPAP54920 295 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 ZFP91Q96JP5 570 aaPredicted RBP17.54■□□□□ 0.4
AP4E1-202ENST00000558439 AK7Q96M32 723 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 ZNF287Q9HBT7 754 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 TAB2Q9NYJ8 693 aa17.54■□□□□ 0.4
AP4E1-202ENST00000558439 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.54■□□□□ 0.4
AP4E1-202ENST00000558439 FOXN1O15353 648 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 ANTXR2P58335 489 aa17.53■□□□□ 0.4
AP4E1-202ENST00000558439 SYNRGQ9UMZ2 1314 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms