RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 ATXN3LQ9H3M9 355 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 PHAXQ9H814 394 aaKnown RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 SPC25Q9HBM1 224 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 SEC31BQ9NQW1 1179 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 KBTBD4Q9NVX7 518 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 PLAAQ9Y263 795 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 SVEP1Q4LDE5 3571 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 ELOA3CA0A087WX78 387 aaPredicted RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 ELOA3DA6NLF2 546 aaPredicted RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 NPTXRO95502 500 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 PF4P02776 101 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 RHOQP17081 205 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 EIF2AK2P19525 551 aaKnown RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 RAB33AQ14088 237 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 GRIN2CQ14957 1233 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 ELOA3BQ3SY89 546 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 C20orf204Q6ZNR8 217 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 CDC37L1Q7L3B6 337 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 EEPD1Q7L9B9 569 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 WFDC8Q8IUA0 241 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 SULF2Q8IWU5 870 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 ELOA3Q8NG57 546 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 DHX38Q92620 1227 aaKnown RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 GBP3Q9H0R5 595 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 PICK1Q9NRD5 415 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 DZANK1Q9NVP4 752 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 DNAJB12Q9NXW2 375 aaKnown RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 SLC6A14Q9UN76 642 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 PPME1Q9Y570 386 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 LAMB4A4D0S4 1761 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 MEGF11A6BM72 1044 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 FIGNL2A6NMB9 653 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 MINDY4BA8MYZ0 360 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 PPM1GO15355 546 aaPredicted RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 RFPL3O75679 317 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 B3GALT4O96024 378 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 POLR3DP05423 398 aaPredicted RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 U2AF1L5P0DN76 240 aaPredicted RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 U2AF1Q01081 240 aaKnown RBP eCLIP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 SFSWAPQ12872 951 aaKnown RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 TCEA2Q15560 299 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 TRIP4Q15650 581 aaPredicted RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 RSPO4Q2I0M5 234 aaPredicted RBP1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 CEP135Q66GS9 1140 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 ELMO3Q96BJ8 720 aa1.88□□□□□ -2.11
CTDSPL2-202ENST00000558373 HMGB1P1B2RPK0 211 aaPredicted RBP1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 KCNA6P17658 529 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 MX2P20592 715 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 POU4F3Q15319 338 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 WWC2Q6AWC2 1192 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 CCAR1Q8IX12 1150 aaKnown RBP1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 ASAP3Q8TDY4 903 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 SRPK1Q96SB4 655 aaKnown RBP1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 ZKSCAN3Q9BRR0 538 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 CBX8Q9HC52 389 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 GPAMQ9HCL2 828 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 ABCB6Q9NP58 842 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 RAD18Q9NS91 495 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 GINM1Q9NU53 330 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 EFR3BQ9Y2G0 817 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 A0A087WZG4 1122 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 B4E1Z4 1266 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 CILPO75339 1184 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 VCAM1P19320 739 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 SOX5P35711 763 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 PLEKHG4Q58EX7 1191 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 HSP90AB2PQ58FF8 381 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 USPL1Q5W0Q7 1092 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 SLC51AQ86UW1 340 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 FAM35AQ86V20 835 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 BEND7Q8N7W2 519 aaPredicted RBP1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 GOLM1Q8NBJ4 401 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 PLD4Q96BZ4 506 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 CYP4F12Q9HCS2 524 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 NOP58Q9Y2X3 529 aaKnown RBP1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 SPEF1Q9Y4P9 236 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 FAM221AA4D161 298 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 MEIS3P2A8K0S8 358 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 PDPK1O15530 556 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 EFCAB14O75071 495 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 CDC45O75419 566 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 HSP90AA2PQ14568 343 aaPredicted RBP1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 EXOSC6Q5RKV6 272 aaKnown RBP1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 TMEM201Q5SNT2 666 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 C9orf131Q5VYM1 1079 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 TPTE2Q6XPS3 522 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 C16orf86Q6ZW13 317 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 CD163Q86VB7 1156 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 ACSBG1Q96GR2 724 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 DEPDC7Q96QD5 511 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 PCOLCE2Q9UKZ9 415 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 ZNRF3Q9ULT6 936 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 SOX13Q9UN79 622 aa1.87□□□□□ -2.11
CTDSPL2-202ENST00000558373 ALG1L2C9J202 215 aa1.86□□□□□ -2.11
CTDSPL2-202ENST00000558373 BNIP3LO60238 219 aa1.86□□□□□ -2.11
CTDSPL2-202ENST00000558373 STAU1O95793 577 aaKnown RBP1.86□□□□□ -2.11
CTDSPL2-202ENST00000558373 GSTP1P09211 210 aaKnown RBP1.86□□□□□ -2.11
CTDSPL2-202ENST00000558373 CAP2P40123 477 aa1.86□□□□□ -2.11
CTDSPL2-202ENST00000558373 ETV3P41162 512 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms