RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 BTBD19C9JJ37 291 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 SMARCA5O60264 1052 aaPredicted RBP12.41□□□□□ -0.42
TPM1-212ENST00000558347 CETPP11597 493 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 CAP1Q01518 475 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 TAF1CQ15572 869 aaPredicted RBP12.41□□□□□ -0.42
TPM1-212ENST00000558347 SCYL3Q8IZE3 742 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 KCNH4Q9UQ05 1017 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 SIPA1L1O43166 1804 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 CENPFP49454 3210 aa12.41□□□□□ -0.42
TPM1-212ENST00000558347 PHIPQ8WWQ0 1821 aa12.4□□□□□ -0.42
TPM1-212ENST00000558347 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
TPM1-212ENST00000558347 PPP4CP60510 307 aa12.4□□□□□ -0.42
TPM1-212ENST00000558347 MOGSQ13724 837 aa12.4□□□□□ -0.42
TPM1-212ENST00000558347 PKN2Q16513 984 aaKnown RBP12.4□□□□□ -0.42
TPM1-212ENST00000558347 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
TPM1-212ENST00000558347 CD99L2Q8TCZ2 262 aa12.4□□□□□ -0.42
TPM1-212ENST00000558347 NOL10Q9BSC4 688 aaKnown RBP12.4□□□□□ -0.42
TPM1-212ENST00000558347 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.4□□□□□ -0.42
TPM1-212ENST00000558347 HPS5Q9UPZ3 1129 aa12.4□□□□□ -0.42
TPM1-212ENST00000558347 SALL3Q9BXA9 1300 aa12.4□□□□□ -0.42
TPM1-212ENST00000558347 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
TPM1-212ENST00000558347 BAG3O95817 575 aa12.39□□□□□ -0.43
TPM1-212ENST00000558347 PTPRAP18433 802 aa12.39□□□□□ -0.43
TPM1-212ENST00000558347 SP3Q02447 781 aa12.39□□□□□ -0.43
TPM1-212ENST00000558347 OTOP1Q7RTM1 612 aa12.39□□□□□ -0.43
TPM1-212ENST00000558347 PLEKHM2Q8IWE5 1019 aa12.39□□□□□ -0.43
TPM1-212ENST00000558347 CLASRPQ8N2M8 674 aaKnown RBP12.39□□□□□ -0.43
TPM1-212ENST00000558347 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
TPM1-212ENST00000558347 OSBPL3Q9H4L5 887 aa12.39□□□□□ -0.43
TPM1-212ENST00000558347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.39□□□□□ -0.43
TPM1-212ENST00000558347 ZFYVE28Q9HCC9 887 aa12.39□□□□□ -0.43
TPM1-212ENST00000558347 TRIM17Q9Y577 477 aa12.39□□□□□ -0.43
TPM1-212ENST00000558347 TNRC18O15417 2968 aaPredicted RBP12.38□□□□□ -0.43
TPM1-212ENST00000558347 ZSWIM8A7E2V4 1837 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 TBC1D12O60347 775 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
TPM1-212ENST00000558347 IGSF3O75054 1194 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 CYP7A1P22680 504 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 DYNLL1P63167 89 aaKnown RBP12.38□□□□□ -0.43
TPM1-212ENST00000558347 FBXO46Q6PJ61 603 aaPredicted RBP12.38□□□□□ -0.43
TPM1-212ENST00000558347 CCDC84Q86UT8 332 aaPredicted RBP12.38□□□□□ -0.43
TPM1-212ENST00000558347 MAPKAPK5Q8IW41 473 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 ERO1AQ96HE7 468 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 ZCCHC17Q9NP64 241 aaKnown RBP12.38□□□□□ -0.43
TPM1-212ENST00000558347 ZHX2Q9Y6X8 837 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 FLT1P17948 1338 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 ATAD5Q96QE3 1844 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 PTPRFP10586 1907 aa12.38□□□□□ -0.43
TPM1-212ENST00000558347 TLR2O60603 784 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
TPM1-212ENST00000558347 PLCG2P16885 1265 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 RGS19P49795 217 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 RRP1BQ14684 758 aaKnown RBP12.37□□□□□ -0.43
TPM1-212ENST00000558347 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 ANKRD23Q86SG2 305 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 MAGEB6Q8N7X4 407 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 MIGA1Q8NAN2 632 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 PICK1Q9NRD5 415 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 AFG3L2Q9Y4W6 797 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 PDHXO00330 501 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 CXCL11O14625 94 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 SOX10P56693 466 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 GPAT2Q6NUI2 795 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 DNAJC18Q9H819 358 aa12.37□□□□□ -0.43
TPM1-212ENST00000558347 A0A0G2JLL6 359 aaPredicted RBP12.36□□□□□ -0.43
TPM1-212ENST00000558347 RBM25P49756 843 aaKnown RBP12.36□□□□□ -0.43
TPM1-212ENST00000558347 PDE1AP54750 535 aa12.36□□□□□ -0.43
TPM1-212ENST00000558347 MAP3K12Q12852 859 aa12.36□□□□□ -0.43
TPM1-212ENST00000558347 PRRT2Q7Z6L0 340 aaPredicted RBP12.36□□□□□ -0.43
TPM1-212ENST00000558347 OTUD7AQ8TE49 926 aaPredicted RBP12.36□□□□□ -0.43
TPM1-212ENST00000558347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM1-212ENST00000558347 EDC3Q96F86 508 aaKnown RBP12.36□□□□□ -0.43
TPM1-212ENST00000558347 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
TPM1-212ENST00000558347 DHX36Q9H2U1 1008 aaKnown RBP12.36□□□□□ -0.43
TPM1-212ENST00000558347 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
TPM1-212ENST00000558347 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
TPM1-212ENST00000558347 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
TPM1-212ENST00000558347 BRCA2P51587 3418 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 ADGRA2Q96PE1 1338 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 MYH1P12882 1939 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 TRIM75PA6NK02 468 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 GOLIM4O00461 696 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 MX1P20591 662 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 C17orf99Q6UX52 265 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 ARHGAP39Q9C0H5 1083 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 SAP30BPQ9UHR5 308 aaKnown RBP12.35□□□□□ -0.43
TPM1-212ENST00000558347 HERC5Q9UII4 1024 aaKnown RBP12.35□□□□□ -0.43
TPM1-212ENST00000558347 PTPN22Q9Y2R2 807 aa12.35□□□□□ -0.43
TPM1-212ENST00000558347 CAP2P40123 477 aa12.34□□□□□ -0.43
TPM1-212ENST00000558347 JAG1P78504 1218 aa12.34□□□□□ -0.43
TPM1-212ENST00000558347 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
TPM1-212ENST00000558347 METTL16Q86W50 562 aaKnown RBP12.34□□□□□ -0.43
TPM1-212ENST00000558347 SNX21Q969T3 373 aa12.34□□□□□ -0.43
TPM1-212ENST00000558347 RIOK1Q9BRS2 568 aaKnown RBP12.34□□□□□ -0.43
TPM1-212ENST00000558347 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms