RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 MAP3K12Q12852 859 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 LRSAM1Q6UWE0 723 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 MOB2Q70IA6 237 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 CDAN1Q8IWY9 1227 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 IPO4Q8TEX9 1081 aaKnown RBP9.47□□□□□ -0.89
RTF1-205ENST00000558298 HOOK2Q96ED9 719 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 PRDM10Q9NQV6 1147 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 TMOD2Q9NZR1 351 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 ABCF2Q9UG63 623 aa9.47□□□□□ -0.89
RTF1-205ENST00000558298 CLRN2A0PK11 232 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 WDHD1O75717 1129 aaPredicted RBP9.46□□□□□ -0.9
RTF1-205ENST00000558298 BAG4O95429 457 aaKnown RBP9.46□□□□□ -0.9
RTF1-205ENST00000558298 MX1P20591 662 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 MAP3K10Q02779 954 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 NUCB1Q02818 461 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 ZSCAN23Q3MJ62 389 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 SUPT20HL1Q3ZLR7 823 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 CDC42EP5Q6NZY7 148 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 CASC1Q6TDU7 716 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 PI4K2BQ8TCG2 481 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 FAM151AQ8WW52 585 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 CCDC102AQ96A19 550 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 TDRD3Q9H7E2 651 aaKnown RBP9.46□□□□□ -0.9
RTF1-205ENST00000558298 LRP2BPQ9P2M1 347 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 MYH1P12882 1939 aa9.46□□□□□ -0.9
RTF1-205ENST00000558298 DOCK1Q14185 1865 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 TCRBV5S4A2TA0A5A2 114 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 GOLGA6L6A8MZA4 724 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 ST18O60284 1047 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 BAG3O95817 575 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 PTMAP06454 111 aaKnown RBP9.45□□□□□ -0.9
RTF1-205ENST00000558298 NF2P35240 595 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 CTCFP49711 727 aaPredicted RBP9.45□□□□□ -0.9
RTF1-205ENST00000558298 RASA3Q14644 834 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 UBE3CQ15386 1083 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 NBPF12Q5TAG4 269 aaPredicted RBP9.45□□□□□ -0.9
RTF1-205ENST00000558298 NAA16Q6N069 864 aaPredicted RBP9.45□□□□□ -0.9
RTF1-205ENST00000558298 SKAP1Q86WV1 359 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 GAS2L3Q86XJ1 694 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 PIBF1Q8WXW3 757 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 PIH1D3Q9NQM4 214 aaKnown RBP9.45□□□□□ -0.9
RTF1-205ENST00000558298 PAG1Q9NWQ8 432 aa9.45□□□□□ -0.9
RTF1-205ENST00000558298 A0A0U1RQG5 324 aaPredicted RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 UBE2Q2LH0YL09 131 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 CA12O43570 354 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 SMARCA5O60264 1052 aaPredicted RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 ZFYP08048 801 aaPredicted RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 PDIA4P13667 645 aaKnown RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 BTDP43251 543 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 ZNF157P51786 506 aaPredicted RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 RBM5P52756 815 aaKnown RBP eCLIP9.44□□□□□ -0.9
RTF1-205ENST00000558298 KIF23Q02241 960 aaPredicted RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 LRRFIP1Q32MZ4 808 aaKnown RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 TBC1D9Q6ZT07 1266 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 PAXIP1Q6ZW49 1069 aaPredicted RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 METTL16Q86W50 562 aaKnown RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 CHD1LQ86WJ1 897 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 KBTBD3Q8NAB2 608 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 DNAJC2Q99543 621 aaKnown RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 RIOK1Q9BRS2 568 aaKnown RBP9.44□□□□□ -0.9
RTF1-205ENST00000558298 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.44□□□□□ -0.9
RTF1-205ENST00000558298 SAGE1Q9NXZ1 904 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 RAI14Q9P0K7 980 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 FAM198AQ9UFP1 575 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 FZD1Q9UP38 647 aa9.44□□□□□ -0.9
RTF1-205ENST00000558298 PTPRFP10586 1907 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 PHIPQ8WWQ0 1821 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 ATAD5Q96QE3 1844 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 APBB1O00213 710 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 PPP1R12BO60237 982 aaPredicted RBP9.43□□□□□ -0.9
RTF1-205ENST00000558298 TBC1D12O60347 775 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 USP2O75604 605 aaPredicted RBP9.43□□□□□ -0.9
RTF1-205ENST00000558298 PDE6AP16499 860 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 ADD2P35612 726 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 CACNB3P54284 484 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 PDE1AP54750 535 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 ZSCAN25Q6NSZ9 544 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 CAVIN1Q6NZI2 390 aaKnown RBP9.43□□□□□ -0.9
RTF1-205ENST00000558298 ADGRA1Q86SQ6 560 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 REM2Q8IYK8 340 aaPredicted RBP9.43□□□□□ -0.9
RTF1-205ENST00000558298 BBXQ8WY36 941 aaPredicted RBP9.43□□□□□ -0.9
RTF1-205ENST00000558298 CSRNP1Q96S65 589 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 CFHR5Q9BXR6 569 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 TMEM39BQ9GZU3 492 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 DHX36Q9H2U1 1008 aaKnown RBP9.43□□□□□ -0.9
RTF1-205ENST00000558298 VEZTQ9HBM0 779 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 SPTLC3Q9NUV7 552 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 OGFRQ9NZT2 677 aa9.43□□□□□ -0.9
RTF1-205ENST00000558298 GOLIM4O00461 696 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 IDH1O75874 414 aaKnown RBP9.42□□□□□ -0.9
RTF1-205ENST00000558298 LBX1P52954 281 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 NFIAQ12857 509 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 GRM1Q13255 1194 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 ANKRD45Q5TZF3 282 aa9.42□□□□□ -0.9
RTF1-205ENST00000558298 SPRYD7Q5W111 196 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms