RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 PIM2Q9P1W9 311 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 PRKAG2Q9UGJ0 569 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 PPP1R9AQ9ULJ8 1098 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 FHAD1B1AJZ9 1412 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 ADAMTS12P58397 1594 aa5.96□□□□□ -1.46
LRRC28-205ENST00000558248 RBM47A0AV96 593 aaKnown RBP5.95□□□□□ -1.46
LRRC28-205ENST00000558248 TRIM37O94972 964 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 CD97P48960 835 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 PSMD2Q13200 908 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 DUSP27Q5VZP5 1158 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 DNAJC14Q6Y2X3 702 aaPredicted RBP5.95□□□□□ -1.46
LRRC28-205ENST00000558248 SV2BQ7L1I2 683 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 ZAR1Q86SH2 424 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 NPAS4Q8IUM7 802 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 WDR89Q96FK6 387 aaPredicted RBP5.95□□□□□ -1.46
LRRC28-205ENST00000558248 FANCD2OSQ96PS1 177 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 SSU72Q9NP77 194 aaKnown RBP5.95□□□□□ -1.46
LRRC28-205ENST00000558248 CYP8B1Q9UNU6 501 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 AK5Q9Y6K8 562 aa5.95□□□□□ -1.46
LRRC28-205ENST00000558248 ASXL2Q76L83 1435 aa5.94□□□□□ -1.46
LRRC28-205ENST00000558248 UNCXA6NJT0 531 aa5.94□□□□□ -1.46
LRRC28-205ENST00000558248 RNGTTO60942 597 aaKnown RBP5.94□□□□□ -1.46
LRRC28-205ENST00000558248 F13BP05160 661 aa5.94□□□□□ -1.46
LRRC28-205ENST00000558248 ZNF252P-AS1Q0IIN9 211 aa5.94□□□□□ -1.46
LRRC28-205ENST00000558248 CCDC85BQ15834 202 aaPredicted RBP5.94□□□□□ -1.46
LRRC28-205ENST00000558248 PCNX4Q63HM2 1172 aa5.94□□□□□ -1.46
LRRC28-205ENST00000558248 DIEXFQ68CQ4 756 aaKnown RBP5.94□□□□□ -1.46
LRRC28-205ENST00000558248 SMYD4Q8IYR2 804 aaPredicted RBP5.94□□□□□ -1.46
LRRC28-205ENST00000558248 STK35Q8TDR2 534 aa5.94□□□□□ -1.46
LRRC28-205ENST00000558248 GPBAR1Q8TDU6 330 aa5.94□□□□□ -1.46
LRRC28-205ENST00000558248 MRS2Q9HD23 443 aa5.94□□□□□ -1.46
LRRC28-205ENST00000558248 GLI2P10070 1586 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 PRR19A6NJB7 356 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 PAGE1O75459 146 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 CELA3AP09093 270 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 HSPA2P54652 639 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 ERVK-24P63145 666 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 TTLL4Q14679 1199 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 DISC1Q9NRI5 854 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 PARP2Q9UGN5 583 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 PCDHGC5Q9Y5F6 944 aa5.93□□□□□ -1.46
LRRC28-205ENST00000558248 PTPRMP28827 1452 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 PLB1Q6P1J6 1458 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 KIAA1324LA8MWY0 1029 aaPredicted RBP5.92□□□□□ -1.46
LRRC28-205ENST00000558248 CYP26A1O43174 497 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 RLBP1P12271 317 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 HCLS1P14317 486 aaPredicted RBP5.92□□□□□ -1.46
LRRC28-205ENST00000558248 FOSL1P15407 271 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 CYP27C1Q4G0S4 372 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 ZC3H12AQ5D1E8 599 aaKnown RBP5.92□□□□□ -1.46
LRRC28-205ENST00000558248 TTBK2Q6IQ55 1244 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 RNF214Q8ND24 703 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 ELMO3Q96BJ8 720 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 LGR6Q9HBX8 967 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 PCOLCE2Q9UKZ9 415 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 PCDHA4Q9UN74 947 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 SPATA31D1Q6ZQQ2 1576 aa5.92□□□□□ -1.46
LRRC28-205ENST00000558248 PTPRGP23470 1445 aa5.91□□□□□ -1.46
LRRC28-205ENST00000558248 NCLP19338 710 aaKnown RBP5.91□□□□□ -1.46
LRRC28-205ENST00000558248 BMP6P22004 513 aa5.91□□□□□ -1.46
LRRC28-205ENST00000558248 ADMP35318 185 aa5.91□□□□□ -1.46
LRRC28-205ENST00000558248 DAB2P98082 770 aa5.91□□□□□ -1.46
LRRC28-205ENST00000558248 GRIN3AQ8TCU5 1115 aa5.91□□□□□ -1.46
LRRC28-205ENST00000558248 ANGEL1Q9UNK9 670 aaKnown RBP5.91□□□□□ -1.46
LRRC28-205ENST00000558248 FAM170BA6NMN3 283 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 SORBS3O60504 671 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 RPS26P62854 115 aaKnown RBP5.9□□□□□ -1.46
LRRC28-205ENST00000558248 ZNF765Q7L2R6 523 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 CDC37L1Q7L3B6 337 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 TMC4Q7Z404 712 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 FBXO33Q7Z6M2 555 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 DTX1Q86Y01 620 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.9□□□□□ -1.46
LRRC28-205ENST00000558248 KCT2Q8NC54 265 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 SREK1Q8WXA9 508 aaKnown RBP5.9□□□□□ -1.46
LRRC28-205ENST00000558248 LRRC4CQ9HCJ2 640 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 C1GALT1Q9NS00 363 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 CACNA2D2Q9NY47 1150 aa5.9□□□□□ -1.46
LRRC28-205ENST00000558248 TEX14Q8IWB6 1497 aa5.9□□□□□ -1.47
LRRC28-205ENST00000558248 ABCC2Q92887 1545 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 PCF11O94913 1555 aaKnown RBP5.89□□□□□ -1.47
LRRC28-205ENST00000558248 FANCGO15287 622 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 DYNC1LI2O43237 492 aaPredicted RBP5.89□□□□□ -1.47
LRRC28-205ENST00000558248 SPINK2P20155 84 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 ST13P50502 369 aaKnown RBP5.89□□□□□ -1.47
LRRC28-205ENST00000558248 CDK5R2Q13319 367 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 TAF1CQ15572 869 aaPredicted RBP5.89□□□□□ -1.47
LRRC28-205ENST00000558248 OGFOD3Q6PK18 319 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 SEZ6L2Q6UXD5 910 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 HDXQ7Z353 690 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 GATA6Q92908 595 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 ISL2Q96A47 359 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 MRRFQ96E11 262 aaKnown RBP5.89□□□□□ -1.47
LRRC28-205ENST00000558248 CRELD1Q96HD1 420 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 SPATA32Q96LK8 384 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 C8orf37Q96NL8 207 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 VTI1BQ9UEU0 232 aa5.89□□□□□ -1.47
LRRC28-205ENST00000558248 EPRSP07814 1512 aaKnown RBP5.89□□□□□ -1.47
LRRC28-205ENST00000558248 DCDC2CA8MYV0 355 aa5.88□□□□□ -1.47
LRRC28-205ENST00000558248 WNT11O96014 354 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms