RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CCL15Q16663 113 aa10.73□□□□□ -0.69
SNRPA1-206ENST00000558059 NOL9Q5SY16 702 aaKnown RBP10.73□□□□□ -0.69
SNRPA1-206ENST00000558059 OTUD7BQ6GQQ9 843 aa10.73□□□□□ -0.69
SNRPA1-206ENST00000558059 CTU1Q7Z7A3 348 aaKnown RBP10.73□□□□□ -0.69
SNRPA1-206ENST00000558059 ADGRA1Q86SQ6 560 aa10.73□□□□□ -0.69
SNRPA1-206ENST00000558059 ZSCAN29Q8IWY8 852 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-206ENST00000558059 SH3RF3Q8TEJ3 882 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-206ENST00000558059 ANTXR1Q9H6X2 564 aa10.73□□□□□ -0.69
SNRPA1-206ENST00000558059 CRHR2Q13324 411 aa10.72□□□□□ -0.69
SNRPA1-206ENST00000558059 TEX11Q8IYF3 940 aa10.72□□□□□ -0.69
SNRPA1-206ENST00000558059 CLASRPQ8N2M8 674 aaKnown RBP10.72□□□□□ -0.69
SNRPA1-206ENST00000558059 OSBPL5Q9H0X9 879 aaPredicted RBP10.72□□□□□ -0.69
SNRPA1-206ENST00000558059 AATFQ9NY61 560 aaKnown RBP eCLIP10.72□□□□□ -0.69
SNRPA1-206ENST00000558059 PHIPQ8WWQ0 1821 aa10.72□□□□□ -0.69
SNRPA1-206ENST00000558059 HTTP42858 3142 aa10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 TBC1D12O60347 775 aa10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 IDH1O75874 414 aaKnown RBP10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 BAG3O95817 575 aa10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 COL2A1P02458 1487 aaPredicted RBP10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 PTPRFP10586 1907 aa10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 CETPP11597 493 aa10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 CYP7A1P22680 504 aa10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 SNAPC2Q13487 334 aa10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 FAM43AQ8N2R8 423 aa10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 NOL10Q9BSC4 688 aaKnown RBP10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 KCNH4Q9UQ05 1017 aa10.71□□□□□ -0.69
SNRPA1-206ENST00000558059 MYH1P12882 1939 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 DOCK1Q14185 1865 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 SIPA1L1O43166 1804 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 CCDC85CA6NKD9 419 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 FAM196BA6NMK8 535 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 BTBD19C9JJ37 291 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 IFIT2P09913 472 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 PLCG2P16885 1265 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 RRP1P56182 461 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 DYNLL1P63167 89 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 MOGSQ13724 837 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 SCYL3Q8IZE3 742 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 MAGEB6Q8N7X4 407 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 TGFBRAP1Q8WUH2 860 aa10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-206ENST00000558059 CENPFP49454 3210 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 CXCL11O14625 94 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 SMARCA5O60264 1052 aaPredicted RBP10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 CTNND1O60716 968 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 PTPRAP18433 802 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 CAP1Q01518 475 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 MAP3K12Q12852 859 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 RRP1BQ14684 758 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 TAF1CQ15572 869 aaPredicted RBP10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 PKN2Q16513 984 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 MAPKAPK5Q8IW41 473 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 BCL11AQ9H165 835 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 DCTPP1Q9H773 170 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 ZCCHC17Q9NP64 241 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 AFG3L2Q9Y4W6 797 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 PCDHB15Q9Y5E8 787 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 ZHX2Q9Y6X8 837 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 ATAD5Q96QE3 1844 aa10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 KIAA0100Q14667 2235 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-206ENST00000558059 FLT1P17948 1338 aa10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 ATP5JP18859 108 aa10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 SP3Q02447 781 aa10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 TTF1Q15361 905 aaPredicted RBP10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 TMED8Q6PL24 325 aaPredicted RBP10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 METTL16Q86W50 562 aaKnown RBP10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 MIGA1Q8NAN2 632 aa10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 EDC3Q96F86 508 aaKnown RBP10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 LRRCC1Q9C099 1032 aa10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 DHX36Q9H2U1 1008 aaKnown RBP10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 ZFYVE28Q9HCC9 887 aa10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 PICK1Q9NRD5 415 aa10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 PI4KBQ9UBF8 816 aa10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 MYH7P12883 1935 aa10.68□□□□□ -0.7
SNRPA1-206ENST00000558059 GOLIM4O00461 696 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 TLR2O60603 784 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 PDE6AP16499 860 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 GPAT2Q6NUI2 795 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 FBXO46Q6PJ61 603 aaPredicted RBP10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 OTOP1Q7RTM1 612 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 ANKRD23Q86SG2 305 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 CCDC84Q86UT8 332 aaPredicted RBP10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 CD99L2Q8TCZ2 262 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 ERO1AQ96HE7 468 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 DNAJC2Q99543 621 aaKnown RBP10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 HAUS7Q99871 368 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 RIOK1Q9BRS2 568 aaKnown RBP10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 BOLA2Q9H3K6 86 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 HERC5Q9UII4 1024 aaKnown RBP10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 PALD1Q9ULE6 856 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 COLQQ9Y215 455 aaPredicted RBP10.67□□□□□ -0.7
SNRPA1-206ENST00000558059 A0A0G2JLL6 359 aaPredicted RBP10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 TCRBV5S4A2TA0A5A2 114 aa10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 PDHXO00330 501 aa10.66□□□□□ -0.7
SNRPA1-206ENST00000558059 CAP2P40123 477 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms