RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 FLT1P17948 1338 aa20.31■□□□□ 0.84
NEDD4-212ENST00000557845 OTOP1Q7RTM1 612 aa20.31■□□□□ 0.84
NEDD4-212ENST00000557845 CERS3Q8IU89 383 aa20.31■□□□□ 0.84
NEDD4-212ENST00000557845 FOXP4Q8IVH2 680 aaPredicted RBP20.31■□□□□ 0.84
NEDD4-212ENST00000557845 DCTPP1Q9H773 170 aa20.31■□□□□ 0.84
NEDD4-212ENST00000557845 PALD1Q9ULE6 856 aa20.31■□□□□ 0.84
NEDD4-212ENST00000557845 PHIPQ8WWQ0 1821 aa20.31■□□□□ 0.84
NEDD4-212ENST00000557845 PDHXO00330 501 aa20.3■□□□□ 0.84
NEDD4-212ENST00000557845 GOLIM4O00461 696 aa20.3■□□□□ 0.84
NEDD4-212ENST00000557845 SMARCA5O60264 1052 aaPredicted RBP20.3■□□□□ 0.84
NEDD4-212ENST00000557845 ATP5JP18859 108 aa20.3■□□□□ 0.84
NEDD4-212ENST00000557845 RGS19P49795 217 aa20.3■□□□□ 0.84
NEDD4-212ENST00000557845 RRP1P56182 461 aaKnown RBP20.3■□□□□ 0.84
NEDD4-212ENST00000557845 SLC9C2Q5TAH2 1124 aa20.3■□□□□ 0.84
NEDD4-212ENST00000557845 DNAJC2Q99543 621 aaKnown RBP20.3■□□□□ 0.84
NEDD4-212ENST00000557845 BOLA2Q9H3K6 86 aa20.3■□□□□ 0.84
NEDD4-212ENST00000557845 SIPA1L1O43166 1804 aa20.3■□□□□ 0.84
NEDD4-212ENST00000557845 A0A0G2JLL6 359 aaPredicted RBP20.29■□□□□ 0.84
NEDD4-212ENST00000557845 CAP2P40123 477 aa20.29■□□□□ 0.84
NEDD4-212ENST00000557845 CAP1Q01518 475 aa20.29■□□□□ 0.84
NEDD4-212ENST00000557845 RRP1BQ14684 758 aaKnown RBP20.29■□□□□ 0.84
NEDD4-212ENST00000557845 GPAT2Q6NUI2 795 aa20.29■□□□□ 0.84
NEDD4-212ENST00000557845 FASTKD5Q7L8L6 764 aaKnown RBP20.29■□□□□ 0.84
NEDD4-212ENST00000557845 PRRT2Q7Z6L0 340 aaPredicted RBP20.29■□□□□ 0.84
NEDD4-212ENST00000557845 METTL16Q86W50 562 aaKnown RBP20.29■□□□□ 0.84
NEDD4-212ENST00000557845 EFCC1Q9HA90 598 aa20.29■□□□□ 0.84
NEDD4-212ENST00000557845 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.29■□□□□ 0.84
NEDD4-212ENST00000557845 ATAD5Q96QE3 1844 aa20.29■□□□□ 0.84
NEDD4-212ENST00000557845 MYH1P12882 1939 aa20.28■□□□□ 0.84
NEDD4-212ENST00000557845 USP5P45974 858 aa20.28■□□□□ 0.84
NEDD4-212ENST00000557845 CCDC84Q86UT8 332 aaPredicted RBP20.28■□□□□ 0.84
NEDD4-212ENST00000557845 EDC3Q96F86 508 aaKnown RBP20.28■□□□□ 0.84
NEDD4-212ENST00000557845 SAP30BPQ9UHR5 308 aaKnown RBP20.28■□□□□ 0.84
NEDD4-212ENST00000557845 TRIM75PA6NK02 468 aa20.27■□□□□ 0.84
NEDD4-212ENST00000557845 PDE6AP16499 860 aa20.27■□□□□ 0.84
NEDD4-212ENST00000557845 ARHGEF6Q15052 776 aa20.27■□□□□ 0.84
NEDD4-212ENST00000557845 C17orf99Q6UX52 265 aa20.27■□□□□ 0.84
NEDD4-212ENST00000557845 HAUS7Q99871 368 aa20.27■□□□□ 0.84
NEDD4-212ENST00000557845 RIOK1Q9BRS2 568 aaKnown RBP20.27■□□□□ 0.84
NEDD4-212ENST00000557845 PAG1Q9NWQ8 432 aa20.27■□□□□ 0.84
NEDD4-212ENST00000557845 PTPN22Q9Y2R2 807 aa20.27■□□□□ 0.84
NEDD4-212ENST00000557845 PCDHB15Q9Y5E8 787 aa20.27■□□□□ 0.84
NEDD4-212ENST00000557845 PTPRFP10586 1907 aa20.27■□□□□ 0.84
NEDD4-212ENST00000557845 MAGEB6P1A0A0J9YX57 407 aa20.26■□□□□ 0.83
NEDD4-212ENST00000557845 HLA-DOAP06340 250 aa20.26■□□□□ 0.83
NEDD4-212ENST00000557845 GADL1Q6ZQY3 521 aa20.26■□□□□ 0.83
NEDD4-212ENST00000557845 CRACR2BQ8N4Y2 399 aaPredicted RBP20.26■□□□□ 0.83
NEDD4-212ENST00000557845 TRIM34Q9BYJ4 488 aa20.26■□□□□ 0.83
NEDD4-212ENST00000557845 DNAJC18Q9H819 358 aa20.26■□□□□ 0.83
NEDD4-212ENST00000557845 ZNF532Q9HCE3 1301 aa20.26■□□□□ 0.83
NEDD4-212ENST00000557845 TCRBV5S4A2TA0A5A2 114 aa20.25■□□□□ 0.83
NEDD4-212ENST00000557845 USP17L5A8MUK1 530 aa20.25■□□□□ 0.83
NEDD4-212ENST00000557845 SPP2Q13103 211 aa20.25■□□□□ 0.83
NEDD4-212ENST00000557845 TBC1D2Q9BYX2 928 aa20.25■□□□□ 0.83
NEDD4-212ENST00000557845 CPA4Q9UI42 421 aa20.25■□□□□ 0.83
NEDD4-212ENST00000557845 LACTBP83111 547 aaPredicted RBP20.24■□□□□ 0.83
NEDD4-212ENST00000557845 KIF22Q14807 665 aa20.24■□□□□ 0.83
NEDD4-212ENST00000557845 SLC4A8Q2Y0W8 1093 aa20.24■□□□□ 0.83
NEDD4-212ENST00000557845 ZNF280CQ8ND82 737 aa20.24■□□□□ 0.83
NEDD4-212ENST00000557845 PARK7Q99497 189 aaKnown RBP20.24■□□□□ 0.83
NEDD4-212ENST00000557845 SLC45A1Q9Y2W3 748 aa20.24■□□□□ 0.83
NEDD4-212ENST00000557845 ADGRA2Q96PE1 1338 aa20.24■□□□□ 0.83
NEDD4-212ENST00000557845 CYP2C8P10632 490 aa20.23■□□□□ 0.83
NEDD4-212ENST00000557845 ADD2P35612 726 aa20.23■□□□□ 0.83
NEDD4-212ENST00000557845 SOX10P56693 466 aa20.23■□□□□ 0.83
NEDD4-212ENST00000557845 JAG1P78504 1218 aa20.23■□□□□ 0.83
NEDD4-212ENST00000557845 TTC6Q86TZ1 520 aa20.23■□□□□ 0.83
NEDD4-212ENST00000557845 ECHDC1Q9NTX5 307 aa20.23■□□□□ 0.83
NEDD4-212ENST00000557845 ASNSP08243 561 aa20.22■□□□□ 0.83
NEDD4-212ENST00000557845 MLLT1Q03111 559 aaPredicted RBP20.22■□□□□ 0.83
NEDD4-212ENST00000557845 CRBNQ96SW2 442 aa20.22■□□□□ 0.83
NEDD4-212ENST00000557845 ARHGAP39Q9C0H5 1083 aa20.22■□□□□ 0.83
NEDD4-212ENST00000557845 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.22■□□□□ 0.83
NEDD4-212ENST00000557845 AS3MTQ9HBK9 375 aa20.22■□□□□ 0.83
NEDD4-212ENST00000557845 GINM1Q9NU53 330 aa20.22■□□□□ 0.83
NEDD4-212ENST00000557845 SLFNL1Q499Z3 407 aa20.21■□□□□ 0.83
NEDD4-212ENST00000557845 TATDN1Q6P1N9 297 aa20.21■□□□□ 0.83
NEDD4-212ENST00000557845 PROCA1Q8NCQ7 364 aaPredicted RBP20.21■□□□□ 0.83
NEDD4-212ENST00000557845 WDR18Q9BV38 432 aa20.21■□□□□ 0.83
NEDD4-212ENST00000557845 CRNKL1Q9BZJ0 848 aaKnown RBP20.21■□□□□ 0.83
NEDD4-212ENST00000557845 EHD4Q9H223 541 aa20.21■□□□□ 0.83
NEDD4-212ENST00000557845 SERPINB13Q9UIV8 391 aa20.21■□□□□ 0.83
NEDD4-212ENST00000557845 AGTPBP1Q9UPW5 1226 aa20.21■□□□□ 0.83
NEDD4-212ENST00000557845 ZSWIM8A7E2V4 1837 aa20.2■□□□□ 0.82
NEDD4-212ENST00000557845 GDF11O95390 407 aa20.2■□□□□ 0.82
NEDD4-212ENST00000557845 GNRH1P01148 92 aa20.2■□□□□ 0.82
NEDD4-212ENST00000557845 BCRP11274 1271 aa20.2■□□□□ 0.82
NEDD4-212ENST00000557845 PLCD1P51178 756 aa20.2■□□□□ 0.82
NEDD4-212ENST00000557845 SH3D19Q5HYK7 790 aa20.2■□□□□ 0.82
NEDD4-212ENST00000557845 LCORLQ8N3X6 602 aa20.2■□□□□ 0.82
NEDD4-212ENST00000557845 MYH7P12883 1935 aa20.19■□□□□ 0.82
NEDD4-212ENST00000557845 ECM2O94769 699 aaPredicted RBP20.19■□□□□ 0.82
NEDD4-212ENST00000557845 POLR3DP05423 398 aaPredicted RBP20.19■□□□□ 0.82
NEDD4-212ENST00000557845 CTGFP29279 349 aa20.19■□□□□ 0.82
NEDD4-212ENST00000557845 PSMC4P43686 418 aa20.19■□□□□ 0.82
NEDD4-212ENST00000557845 HMGCS2P54868 508 aa20.19■□□□□ 0.82
NEDD4-212ENST00000557845 UBE3CQ15386 1083 aa20.19■□□□□ 0.82
NEDD4-212ENST00000557845 SHROOM1Q2M3G4 852 aaPredicted RBP20.19■□□□□ 0.82
NEDD4-212ENST00000557845 TREML2Q5T2D2 321 aa20.19■□□□□ 0.82
NEDD4-212ENST00000557845 SDR42E1Q8WUS8 393 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms