RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SIPA1L1O43166 1804 aa18.22■□□□□ 0.51
NEDD1-213ENST00000557644 SEC24BO95487 1268 aa18.22■□□□□ 0.51
NEDD1-213ENST00000557644 AMOTL1Q8IY63 956 aa18.22■□□□□ 0.51
NEDD1-213ENST00000557644 SERPINB13Q9UIV8 391 aa18.22■□□□□ 0.51
NEDD1-213ENST00000557644 NF2P35240 595 aa18.21■□□□□ 0.51
NEDD1-213ENST00000557644 CTDSPL2Q05D32 466 aa18.21■□□□□ 0.51
NEDD1-213ENST00000557644 PPARAQ07869 468 aa18.21■□□□□ 0.51
NEDD1-213ENST00000557644 CRACR2BQ8N4Y2 399 aaPredicted RBP18.21■□□□□ 0.51
NEDD1-213ENST00000557644 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.21■□□□□ 0.51
NEDD1-213ENST00000557644 RBM8AQ9Y5S9 174 aaKnown RBP18.21■□□□□ 0.51
NEDD1-213ENST00000557644 ZMYM6O95789 1325 aa18.2■□□□□ 0.5
NEDD1-213ENST00000557644 GABPAQ06546 454 aa18.2■□□□□ 0.5
NEDD1-213ENST00000557644 INCENPQ9NQS7 918 aa18.2■□□□□ 0.5
NEDD1-213ENST00000557644 USP2O75604 605 aaPredicted RBP18.2■□□□□ 0.5
NEDD1-213ENST00000557644 TTLL12Q14166 644 aaPredicted RBP18.2■□□□□ 0.5
NEDD1-213ENST00000557644 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
NEDD1-213ENST00000557644 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
NEDD1-213ENST00000557644 NBPF3Q9H094 633 aa18.2■□□□□ 0.5
NEDD1-213ENST00000557644 EHD4Q9H223 541 aa18.2■□□□□ 0.5
NEDD1-213ENST00000557644 TACC3Q9Y6A5 838 aa18.2■□□□□ 0.5
NEDD1-213ENST00000557644 MAP3K10Q02779 954 aa18.19■□□□□ 0.5
NEDD1-213ENST00000557644 ANGEL1Q9UNK9 670 aaKnown RBP18.19■□□□□ 0.5
NEDD1-213ENST00000557644 RRP1BQ14684 758 aaKnown RBP18.19■□□□□ 0.5
NEDD1-213ENST00000557644 DCAF15Q66K64 600 aa18.19■□□□□ 0.5
NEDD1-213ENST00000557644 GBA2Q9HCG7 927 aaPredicted RBP18.19■□□□□ 0.5
NEDD1-213ENST00000557644 HERC5Q9UII4 1024 aaKnown RBP18.19■□□□□ 0.5
NEDD1-213ENST00000557644 TAF6LQ9Y6J9 622 aa18.19■□□□□ 0.5
NEDD1-213ENST00000557644 U3KPZ7 1027 aaPredicted RBP18.19■□□□□ 0.5
NEDD1-213ENST00000557644 PHF20L1A8MW92 1017 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 PPP1R12BO60237 982 aaPredicted RBP18.18■□□□□ 0.5
NEDD1-213ENST00000557644 TBC1D12O60347 775 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 REC8O95072 547 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 HOOK2Q96ED9 719 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 TRIM34Q9BYJ4 488 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 CTNNA3Q9UI47 895 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 UBE2Q2LH0YL09 131 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 ZNF213O14771 459 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 PRDM1O75626 825 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 CYP21A2P08686 494 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 SHMT1P34896 483 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 SHROOM1Q2M3G4 852 aaPredicted RBP18.18■□□□□ 0.5
NEDD1-213ENST00000557644 C16orf86Q6ZW13 317 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 TBC1D10CQ8IV04 446 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 KLRG1Q96E93 195 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 WRNIP1Q96S55 665 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 ZNF341Q9BYN7 854 aa18.18■□□□□ 0.5
NEDD1-213ENST00000557644 INPP5BP32019 993 aa18.17■□□□□ 0.5
NEDD1-213ENST00000557644 CDK8P49336 464 aa18.17■□□□□ 0.5
NEDD1-213ENST00000557644 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.17■□□□□ 0.5
NEDD1-213ENST00000557644 ANAPC4Q9UJX5 808 aa18.17■□□□□ 0.5
NEDD1-213ENST00000557644 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
NEDD1-213ENST00000557644 NECTIN1Q15223 517 aa18.17■□□□□ 0.5
NEDD1-213ENST00000557644 IMMTQ16891 758 aaKnown RBP18.17■□□□□ 0.5
NEDD1-213ENST00000557644 ZKSCAN4Q969J2 545 aaPredicted RBP18.17■□□□□ 0.5
NEDD1-213ENST00000557644 LAMB1P07942 1786 aa18.16■□□□□ 0.5
NEDD1-213ENST00000557644 C2orf69Q8N8R5 385 aa18.16■□□□□ 0.5
NEDD1-213ENST00000557644 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.16■□□□□ 0.5
NEDD1-213ENST00000557644 JAG1P78504 1218 aa18.16■□□□□ 0.5
NEDD1-213ENST00000557644 TATDN1Q6P1N9 297 aa18.16■□□□□ 0.5
NEDD1-213ENST00000557644 ARMC9Q7Z3E5 817 aa18.16■□□□□ 0.5
NEDD1-213ENST00000557644 USP26Q9BXU7 913 aa18.16■□□□□ 0.5
NEDD1-213ENST00000557644 ZNF112Q9UJU3 913 aa18.16■□□□□ 0.5
NEDD1-213ENST00000557644 TRPM7Q96QT4 1865 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 GDF11O95390 407 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 MAP3K11Q16584 847 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.15■□□□□ 0.5
NEDD1-213ENST00000557644 NKX2-3Q8TAU0 364 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 CLMNQ96JQ2 1002 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.15■□□□□ 0.5
NEDD1-213ENST00000557644 TMEM88BA6NKF7 163 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 SLC27A2O14975 620 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 IREB2P48200 963 aaKnown RBP18.15■□□□□ 0.5
NEDD1-213ENST00000557644 MKNK2Q9HBH9 465 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 SWAP70Q9UH65 585 aa18.15■□□□□ 0.5
NEDD1-213ENST00000557644 SLC3A2P08195 630 aaKnown RBP18.14■□□□□ 0.49
NEDD1-213ENST00000557644 PAPPA2Q9BXP8 1791 aa18.14■□□□□ 0.49
NEDD1-213ENST00000557644 APLP1P51693 650 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 FKBP1BP68106 108 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 MAP3K9P80192 1104 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 PDE4BQ07343 736 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 VGLL4Q14135 290 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 CERKLQ49MI3 558 aaPredicted RBP18.13■□□□□ 0.49
NEDD1-213ENST00000557644 AKNAD1Q5T1N1 836 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 SAPCD2Q86UD0 394 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 STAG1Q8WVM7 1258 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.13■□□□□ 0.49
NEDD1-213ENST00000557644 NEDD4P46934 1319 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 RASA1P20936 1047 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 HUNKP57058 714 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 LDLRAD1Q5T700 205 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 STOX1Q6ZVD7 989 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 RASEFQ8IZ41 740 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 TOMM22Q9NS69 142 aa18.13■□□□□ 0.49
NEDD1-213ENST00000557644 ABT1Q9ULW3 272 aaKnown RBP18.13■□□□□ 0.49
NEDD1-213ENST00000557644 AKR1B1P15121 316 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 CAP2P40123 477 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 C1QTNF8P60827 252 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 HTRA3P83110 453 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 RRP12Q5JTH9 1297 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms