RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 ITGB8P26012 769 aa16.85■□□□□ 0.29
TMEM260-215ENST00000557626 HIBADHP31937 336 aaKnown RBP16.85■□□□□ 0.29
TMEM260-215ENST00000557626 RGS2P41220 211 aa16.85■□□□□ 0.29
TMEM260-215ENST00000557626 SNX17Q15036 470 aa16.85■□□□□ 0.29
TMEM260-215ENST00000557626 GJC2Q5T442 439 aaPredicted RBP16.85■□□□□ 0.29
TMEM260-215ENST00000557626 DUSP27Q5VZP5 1158 aa16.85■□□□□ 0.29
TMEM260-215ENST00000557626 APBA2Q99767 749 aa16.85■□□□□ 0.29
TMEM260-215ENST00000557626 KCNH6Q9H252 994 aa16.85■□□□□ 0.29
TMEM260-215ENST00000557626 DAGLAQ9Y4D2 1042 aa16.85■□□□□ 0.29
TMEM260-215ENST00000557626 PHF20L1A8MW92 1017 aa16.84■□□□□ 0.29
TMEM260-215ENST00000557626 KBTBD13C9JR72 458 aa16.84■□□□□ 0.29
TMEM260-215ENST00000557626 PLIN1O60240 522 aa16.84■□□□□ 0.29
TMEM260-215ENST00000557626 CNGA1P29973 690 aa16.84■□□□□ 0.29
TMEM260-215ENST00000557626 GYG1P46976 350 aa16.84■□□□□ 0.29
TMEM260-215ENST00000557626 CHAF1AQ13111 956 aaPredicted RBP16.84■□□□□ 0.29
TMEM260-215ENST00000557626 PABPC4Q13310 644 aaKnown RBP eCLIP16.84■□□□□ 0.29
TMEM260-215ENST00000557626 PROCA1Q8NCQ7 364 aaPredicted RBP16.84■□□□□ 0.29
TMEM260-215ENST00000557626 SPINK5Q9NQ38 1064 aaPredicted RBP16.84■□□□□ 0.29
TMEM260-215ENST00000557626 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
TMEM260-215ENST00000557626 MAP3K2Q9Y2U5 619 aa16.84■□□□□ 0.29
TMEM260-215ENST00000557626 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
TMEM260-215ENST00000557626 MAST3O60307 1309 aa16.83■□□□□ 0.28
TMEM260-215ENST00000557626 RAG1P15918 1043 aa16.83■□□□□ 0.28
TMEM260-215ENST00000557626 TBC1D22AQ8WUA7 517 aa16.83■□□□□ 0.28
TMEM260-215ENST00000557626 MRIQ9BWK5 157 aa16.83■□□□□ 0.28
TMEM260-215ENST00000557626 PLA2G12BQ9BX93 195 aa16.83■□□□□ 0.28
TMEM260-215ENST00000557626 ASCC2Q9H1I8 757 aaPredicted RBP16.83■□□□□ 0.28
TMEM260-215ENST00000557626 TACC3Q9Y6A5 838 aa16.83■□□□□ 0.28
TMEM260-215ENST00000557626 GRXCR1A8MXD5 290 aa16.82■□□□□ 0.28
TMEM260-215ENST00000557626 TLL1O43897 1013 aa16.82■□□□□ 0.28
TMEM260-215ENST00000557626 CSF1RP07333 972 aa16.82■□□□□ 0.28
TMEM260-215ENST00000557626 MFSD14CQ5VZR4 134 aa16.82■□□□□ 0.28
TMEM260-215ENST00000557626 HERVK_113Q902F9 699 aa16.82■□□□□ 0.28
TMEM260-215ENST00000557626 USP6NLQ92738 828 aa16.82■□□□□ 0.28
TMEM260-215ENST00000557626 H7C1W4 665 aa16.81■□□□□ 0.28
TMEM260-215ENST00000557626 CLTBP09497 229 aa16.81■□□□□ 0.28
TMEM260-215ENST00000557626 TLE2Q04725 743 aa16.81■□□□□ 0.28
TMEM260-215ENST00000557626 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
TMEM260-215ENST00000557626 CSPP1Q1MSJ5 1256 aa16.81■□□□□ 0.28
TMEM260-215ENST00000557626 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
TMEM260-215ENST00000557626 ARRDC4Q8NCT1 418 aa16.81■□□□□ 0.28
TMEM260-215ENST00000557626 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.81■□□□□ 0.28
TMEM260-215ENST00000557626 MSRAQ9UJ68 235 aa16.81■□□□□ 0.28
TMEM260-215ENST00000557626 LRRFIP2Q9Y608 721 aaKnown RBP16.81■□□□□ 0.28
TMEM260-215ENST00000557626 CACNA1GO43497 2377 aa16.8■□□□□ 0.28
TMEM260-215ENST00000557626 MAPK4P31152 587 aa16.8■□□□□ 0.28
TMEM260-215ENST00000557626 NFIAQ12857 509 aa16.8■□□□□ 0.28
TMEM260-215ENST00000557626 HHIPL2Q6UWX4 724 aa16.8■□□□□ 0.28
TMEM260-215ENST00000557626 CCDC84Q86UT8 332 aaPredicted RBP16.8■□□□□ 0.28
TMEM260-215ENST00000557626 CCAR1Q8IX12 1150 aaKnown RBP16.8■□□□□ 0.28
TMEM260-215ENST00000557626 FAM84BQ96KN1 310 aaPredicted RBP16.8■□□□□ 0.28
TMEM260-215ENST00000557626 IQSEC3Q9UPP2 1182 aaPredicted RBP16.8■□□□□ 0.28
TMEM260-215ENST00000557626 ATRNL1Q5VV63 1379 aa16.79■□□□□ 0.28
TMEM260-215ENST00000557626 CACNA1BQ00975 2339 aa16.79■□□□□ 0.28
TMEM260-215ENST00000557626 UTYO14607 1347 aa16.79■□□□□ 0.28
TMEM260-215ENST00000557626 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
TMEM260-215ENST00000557626 RAB30Q15771 203 aa16.79■□□□□ 0.28
TMEM260-215ENST00000557626 MORN1Q5T089 497 aa16.79■□□□□ 0.28
TMEM260-215ENST00000557626 C1orf53Q5VUE5 145 aa16.79■□□□□ 0.28
TMEM260-215ENST00000557626 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.79■□□□□ 0.28
TMEM260-215ENST00000557626 COG5Q9UP83 839 aa16.79■□□□□ 0.28
TMEM260-215ENST00000557626 PRRC2BQ5JSZ5 2229 aaKnown RBP16.79■□□□□ 0.28
TMEM260-215ENST00000557626 GBF1Q92538 1859 aa16.78■□□□□ 0.28
TMEM260-215ENST00000557626 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
TMEM260-215ENST00000557626 KIAA0355O15063 1070 aa16.78■□□□□ 0.28
TMEM260-215ENST00000557626 CTNND1O60716 968 aaKnown RBP16.78■□□□□ 0.28
TMEM260-215ENST00000557626 MYCNP04198 464 aaPredicted RBP16.78■□□□□ 0.28
TMEM260-215ENST00000557626 IFIT5Q13325 482 aaKnown RBP16.78■□□□□ 0.28
TMEM260-215ENST00000557626 GPR142Q7Z601 462 aa16.78■□□□□ 0.28
TMEM260-215ENST00000557626 VPS37DQ86XT2 251 aa16.78■□□□□ 0.28
TMEM260-215ENST00000557626 GPRC5AQ8NFJ5 357 aa16.78■□□□□ 0.28
TMEM260-215ENST00000557626 SLC28A3Q9HAS3 691 aa16.78■□□□□ 0.28
TMEM260-215ENST00000557626 PEX10O60683 326 aa16.77■□□□□ 0.28
TMEM260-215ENST00000557626 ADCYAP1R1P41586 468 aa16.77■□□□□ 0.28
TMEM260-215ENST00000557626 HMGCS2P54868 508 aa16.77■□□□□ 0.28
TMEM260-215ENST00000557626 IRX3P78415 501 aaPredicted RBP16.77■□□□□ 0.28
TMEM260-215ENST00000557626 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
TMEM260-215ENST00000557626 PLEKHH3Q7Z736 793 aa16.77■□□□□ 0.28
TMEM260-215ENST00000557626 FERMT2Q96AC1 680 aa16.77■□□□□ 0.28
TMEM260-215ENST00000557626 NKX2-4Q9H2Z4 354 aa16.77■□□□□ 0.28
TMEM260-215ENST00000557626 CWC22Q9HCG8 908 aaKnown RBP16.77■□□□□ 0.28
TMEM260-215ENST00000557626 FAM198AQ9UFP1 575 aa16.77■□□□□ 0.28
TMEM260-215ENST00000557626 ZNF318Q5VUA4 2279 aa16.77■□□□□ 0.27
TMEM260-215ENST00000557626 PI4KAP2A4QPH2 592 aa16.76■□□□□ 0.27
TMEM260-215ENST00000557626 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
TMEM260-215ENST00000557626 CDC42EP5Q6NZY7 148 aa16.76■□□□□ 0.27
TMEM260-215ENST00000557626 KSR2Q6VAB6 950 aa16.76■□□□□ 0.27
TMEM260-215ENST00000557626 PI4KAP1Q8N8J0 262 aa16.76■□□□□ 0.27
TMEM260-215ENST00000557626 PHOX2BQ99453 314 aa16.76■□□□□ 0.27
TMEM260-215ENST00000557626 CD320Q9NPF0 282 aa16.76■□□□□ 0.27
TMEM260-215ENST00000557626 FLRT1Q9NZU1 646 aa16.76■□□□□ 0.27
TMEM260-215ENST00000557626 CHMP3Q9Y3E7 222 aa16.76■□□□□ 0.27
TMEM260-215ENST00000557626 SPP2Q13103 211 aa16.75■□□□□ 0.27
TMEM260-215ENST00000557626 MAP2K5Q13163 448 aa16.75■□□□□ 0.27
TMEM260-215ENST00000557626 CCDC174Q6PII3 467 aa16.75■□□□□ 0.27
TMEM260-215ENST00000557626 ZFPM1Q8IX07 1006 aa16.75■□□□□ 0.27
TMEM260-215ENST00000557626 TXNRD2Q9NNW7 524 aa16.75■□□□□ 0.27
TMEM260-215ENST00000557626 CNNM1Q9NRU3 951 aa16.75■□□□□ 0.27
TMEM260-215ENST00000557626 TMEM39AQ9NV64 488 aa16.75■□□□□ 0.27
TMEM260-215ENST00000557626 SUGT1Q9Y2Z0 365 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms