RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 ZFYVE28Q9HCC9 887 aa16.67■□□□□ 0.26
VPS33B-206ENST00000557358 ZCCHC17Q9NP64 241 aaKnown RBP16.67■□□□□ 0.26
VPS33B-206ENST00000557358 PHF20L1A8MW92 1017 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 GPR25O00155 361 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 CXCL11O14625 94 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 FKTNO75072 461 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 POLR3DP05423 398 aaPredicted RBP16.66■□□□□ 0.26
VPS33B-206ENST00000557358 ARHGEF6Q15052 776 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 UBE3CQ15386 1083 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
VPS33B-206ENST00000557358 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 FASTKD5Q7L8L6 764 aaKnown RBP16.66■□□□□ 0.26
VPS33B-206ENST00000557358 MS4A4AQ96JQ5 239 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 AS3MTQ9HBK9 375 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 SAP30BPQ9UHR5 308 aaKnown RBP16.66■□□□□ 0.26
VPS33B-206ENST00000557358 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
VPS33B-206ENST00000557358 MYH1P12882 1939 aa16.65■□□□□ 0.26
VPS33B-206ENST00000557358 MYH7P12883 1935 aa16.65■□□□□ 0.26
VPS33B-206ENST00000557358 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
VPS33B-206ENST00000557358 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
VPS33B-206ENST00000557358 MX1P20591 662 aa16.65■□□□□ 0.26
VPS33B-206ENST00000557358 ADD2P35612 726 aa16.65■□□□□ 0.26
VPS33B-206ENST00000557358 DGKZQ13574 1117 aa16.65■□□□□ 0.26
VPS33B-206ENST00000557358 BRI3BPQ8WY22 251 aa16.65■□□□□ 0.26
VPS33B-206ENST00000557358 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
VPS33B-206ENST00000557358 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
VPS33B-206ENST00000557358 PALD1Q9ULE6 856 aa16.65■□□□□ 0.26
VPS33B-206ENST00000557358 FOCADQ5VW36 1801 aa16.65■□□□□ 0.26
VPS33B-206ENST00000557358 LAMB1P07942 1786 aa16.64■□□□□ 0.25
VPS33B-206ENST00000557358 ASNSP08243 561 aa16.64■□□□□ 0.25
VPS33B-206ENST00000557358 PTPRAP18433 802 aa16.64■□□□□ 0.25
VPS33B-206ENST00000557358 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.25
VPS33B-206ENST00000557358 RIOK1Q9BRS2 568 aaKnown RBP16.64■□□□□ 0.25
VPS33B-206ENST00000557358 SERPINB13Q9UIV8 391 aa16.64■□□□□ 0.25
VPS33B-206ENST00000557358 KCNH4Q9UQ05 1017 aa16.64■□□□□ 0.25
VPS33B-206ENST00000557358 CDK5RAP2Q96SN8 1893 aa16.64■□□□□ 0.25
VPS33B-206ENST00000557358 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
VPS33B-206ENST00000557358 CAP2P40123 477 aa16.63■□□□□ 0.25
VPS33B-206ENST00000557358 PKN2Q16513 984 aaKnown RBP16.63■□□□□ 0.25
VPS33B-206ENST00000557358 CTU1Q7Z7A3 348 aaKnown RBP16.63■□□□□ 0.25
VPS33B-206ENST00000557358 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
VPS33B-206ENST00000557358 ZNF296Q8WUU4 475 aaPredicted RBP16.63■□□□□ 0.25
VPS33B-206ENST00000557358 ERO1AQ96HE7 468 aa16.63■□□□□ 0.25
VPS33B-206ENST00000557358 ATP8A2Q9NTI2 1148 aa16.63■□□□□ 0.25
VPS33B-206ENST00000557358 MCM9Q9NXL9 1143 aa16.63■□□□□ 0.25
VPS33B-206ENST00000557358 TCRBV5S4A2TA0A5A2 114 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 FAM196BA6NMK8 535 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 USP17L5A8MUK1 530 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 MBD4O95243 580 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 CRHR2Q13324 411 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 KIF22Q14807 665 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 ANKRD23Q86SG2 305 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 PTPN18Q99952 460 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 EHD4Q9H223 541 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
VPS33B-206ENST00000557358 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
VPS33B-206ENST00000557358 SLC4A8Q2Y0W8 1093 aa16.61■□□□□ 0.25
VPS33B-206ENST00000557358 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
VPS33B-206ENST00000557358 GADL1Q6ZQY3 521 aa16.61■□□□□ 0.25
VPS33B-206ENST00000557358 PARK7Q99497 189 aaKnown RBP16.61■□□□□ 0.25
VPS33B-206ENST00000557358 FSD1Q9BTV5 496 aa16.61■□□□□ 0.25
VPS33B-206ENST00000557358 ARMT1Q9H993 441 aa16.61■□□□□ 0.25
VPS33B-206ENST00000557358 CABP5Q9NP86 173 aa16.61■□□□□ 0.25
VPS33B-206ENST00000557358 TRIM75PA6NK02 468 aa16.6■□□□□ 0.25
VPS33B-206ENST00000557358 RNF113AO15541 343 aaKnown RBP16.6■□□□□ 0.25
VPS33B-206ENST00000557358 SP3Q02447 781 aa16.6■□□□□ 0.25
VPS33B-206ENST00000557358 PABPC4Q13310 644 aaKnown RBP eCLIP16.6■□□□□ 0.25
VPS33B-206ENST00000557358 METTL16Q86W50 562 aaKnown RBP16.6■□□□□ 0.25
VPS33B-206ENST00000557358 FAM43AQ8N2R8 423 aa16.6■□□□□ 0.25
VPS33B-206ENST00000557358 LCORLQ8N3X6 602 aa16.6■□□□□ 0.25
VPS33B-206ENST00000557358 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
VPS33B-206ENST00000557358 APPBP2Q92624 585 aa16.6■□□□□ 0.25
VPS33B-206ENST00000557358 MCOLN1Q9GZU1 580 aa16.6■□□□□ 0.25
VPS33B-206ENST00000557358 AFG3L2Q9Y4W6 797 aa16.6■□□□□ 0.25
VPS33B-206ENST00000557358 SLC4A4Q9Y6R1 1079 aa16.6■□□□□ 0.25
VPS33B-206ENST00000557358 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
VPS33B-206ENST00000557358 A0A0G2JLL6 359 aaPredicted RBP16.59■□□□□ 0.25
VPS33B-206ENST00000557358 PDHXO00330 501 aa16.59■□□□□ 0.25
VPS33B-206ENST00000557358 GNAT2P19087 354 aa16.59■□□□□ 0.25
VPS33B-206ENST00000557358 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
VPS33B-206ENST00000557358 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
VPS33B-206ENST00000557358 PRRT2Q7Z6L0 340 aaPredicted RBP16.59■□□□□ 0.25
VPS33B-206ENST00000557358 SDR42E1Q8WUS8 393 aa16.59■□□□□ 0.25
VPS33B-206ENST00000557358 LNPKQ9C0E8 428 aa16.59■□□□□ 0.25
VPS33B-206ENST00000557358 TMOD4Q9NZQ9 345 aa16.59■□□□□ 0.25
VPS33B-206ENST00000557358 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
VPS33B-206ENST00000557358 TLR2O60603 784 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 CAPN15O75808 1086 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 NEFLP07196 543 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 SPP2Q13103 211 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 SMC5Q8IY18 1101 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 EVI5LQ96CN4 794 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 ABHD8Q96I13 439 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 DCP1AQ9NPI6 582 aaPredicted RBP16.58■□□□□ 0.24
VPS33B-206ENST00000557358 SWAP70Q9UH65 585 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 SLC45A1Q9Y2W3 748 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 ATAD5Q96QE3 1844 aa16.58■□□□□ 0.24
VPS33B-206ENST00000557358 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
VPS33B-206ENST00000557358 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
VPS33B-206ENST00000557358 PROCA1Q8NCQ7 364 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms