RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 HPS5Q9UPZ3 1129 aa20.11■□□□□ 0.81
VSX1-207ENST00000557285 KCNH4Q9UQ05 1017 aa20.11■□□□□ 0.81
VSX1-207ENST00000557285 COL2A1P02458 1487 aaPredicted RBP20.11■□□□□ 0.81
VSX1-207ENST00000557285 MYH1P12882 1939 aa20.1■□□□□ 0.81
VSX1-207ENST00000557285 PDHXO00330 501 aa20.1■□□□□ 0.81
VSX1-207ENST00000557285 PKN2Q16513 984 aaKnown RBP20.1■□□□□ 0.81
VSX1-207ENST00000557285 SLC9C2Q5TAH2 1124 aa20.1■□□□□ 0.81
VSX1-207ENST00000557285 GADL1Q6ZQY3 521 aa20.1■□□□□ 0.81
VSX1-207ENST00000557285 CRACR2BQ8N4Y2 399 aaPredicted RBP20.1■□□□□ 0.81
VSX1-207ENST00000557285 PHIPQ8WWQ0 1821 aa20.1■□□□□ 0.81
VSX1-207ENST00000557285 TBC1D12O60347 775 aa20.09■□□□□ 0.81
VSX1-207ENST00000557285 PDE6AP16499 860 aa20.09■□□□□ 0.81
VSX1-207ENST00000557285 SOX10P56693 466 aa20.09■□□□□ 0.81
VSX1-207ENST00000557285 OTOP1Q7RTM1 612 aa20.09■□□□□ 0.81
VSX1-207ENST00000557285 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
VSX1-207ENST00000557285 PI4KBQ9UBF8 816 aa20.09■□□□□ 0.81
VSX1-207ENST00000557285 CAP1Q01518 475 aa20.08■□□□□ 0.81
VSX1-207ENST00000557285 RRP1BQ14684 758 aaKnown RBP20.08■□□□□ 0.81
VSX1-207ENST00000557285 FBXO46Q6PJ61 603 aaPredicted RBP20.08■□□□□ 0.81
VSX1-207ENST00000557285 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.08■□□□□ 0.81
VSX1-207ENST00000557285 DHX36Q9H2U1 1008 aaKnown RBP20.08■□□□□ 0.81
VSX1-207ENST00000557285 PAG1Q9NWQ8 432 aa20.08■□□□□ 0.81
VSX1-207ENST00000557285 CPA4Q9UI42 421 aa20.08■□□□□ 0.81
VSX1-207ENST00000557285 AFG3L2Q9Y4W6 797 aa20.08■□□□□ 0.81
VSX1-207ENST00000557285 PCDHB15Q9Y5E8 787 aa20.08■□□□□ 0.81
VSX1-207ENST00000557285 ZSWIM8A7E2V4 1837 aa20.08■□□□□ 0.8
VSX1-207ENST00000557285 PTPRFP10586 1907 aa20.08■□□□□ 0.8
VSX1-207ENST00000557285 ZNF532Q9HCE3 1301 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 MAGEB6P1A0A0J9YX57 407 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 CXCL11O14625 94 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 TLR2O60603 784 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 IGSF3O75054 1194 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 HLA-DOAP06340 250 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 ATP5JP18859 108 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 MOGSQ13724 837 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 SLFNL1Q499Z3 407 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 ANKRD23Q86SG2 305 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 EFCC1Q9HA90 598 aa20.07■□□□□ 0.8
VSX1-207ENST00000557285 ZCCHC17Q9NP64 241 aaKnown RBP20.07■□□□□ 0.8
VSX1-207ENST00000557285 HERC5Q9UII4 1024 aaKnown RBP20.07■□□□□ 0.8
VSX1-207ENST00000557285 A0A0G2JLL6 359 aaPredicted RBP20.06■□□□□ 0.8
VSX1-207ENST00000557285 TSHZ3Q63HK5 1081 aa20.06■□□□□ 0.8
VSX1-207ENST00000557285 PRRT2Q7Z6L0 340 aaPredicted RBP20.06■□□□□ 0.8
VSX1-207ENST00000557285 NAV1Q8NEY1 1877 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 GDF11O95390 407 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 CYP2C8P10632 490 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 CAP2P40123 477 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 SHROOM1Q2M3G4 852 aaPredicted RBP20.05■□□□□ 0.8
VSX1-207ENST00000557285 GPAT2Q6NUI2 795 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 FASTKD5Q7L8L6 764 aaKnown RBP20.05■□□□□ 0.8
VSX1-207ENST00000557285 HAUS7Q99871 368 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 ARHGAP39Q9C0H5 1083 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 DCTPP1Q9H773 170 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 DNAJC18Q9H819 358 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 HTTP42858 3142 aa20.05■□□□□ 0.8
VSX1-207ENST00000557285 SPP2Q13103 211 aa20.04■□□□□ 0.8
VSX1-207ENST00000557285 CERS3Q8IU89 383 aa20.04■□□□□ 0.8
VSX1-207ENST00000557285 PARK7Q99497 189 aaKnown RBP20.04■□□□□ 0.8
VSX1-207ENST00000557285 RIOK1Q9BRS2 568 aaKnown RBP20.04■□□□□ 0.8
VSX1-207ENST00000557285 CENPFP49454 3210 aa20.04■□□□□ 0.8
VSX1-207ENST00000557285 MYH7P12883 1935 aa20.04■□□□□ 0.8
VSX1-207ENST00000557285 TCRBV5S4A2TA0A5A2 114 aa20.03■□□□□ 0.8
VSX1-207ENST00000557285 CHGBP05060 677 aa20.03■□□□□ 0.8
VSX1-207ENST00000557285 KIF22Q14807 665 aa20.03■□□□□ 0.8
VSX1-207ENST00000557285 FOXP4Q8IVH2 680 aaPredicted RBP20.03■□□□□ 0.8
VSX1-207ENST00000557285 LCORLQ8N3X6 602 aa20.03■□□□□ 0.8
VSX1-207ENST00000557285 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.03■□□□□ 0.8
VSX1-207ENST00000557285 ECHDC1Q9NTX5 307 aa20.03■□□□□ 0.8
VSX1-207ENST00000557285 USP17L5A8MUK1 530 aa20.02■□□□□ 0.8
VSX1-207ENST00000557285 POLR3DP05423 398 aaPredicted RBP20.02■□□□□ 0.8
VSX1-207ENST00000557285 JAG1P78504 1218 aa20.02■□□□□ 0.8
VSX1-207ENST00000557285 LACTBP83111 547 aaPredicted RBP20.02■□□□□ 0.8
VSX1-207ENST00000557285 ZNF280CQ8ND82 737 aa20.02■□□□□ 0.8
VSX1-207ENST00000557285 SDR42E1Q8WUS8 393 aa20.02■□□□□ 0.8
VSX1-207ENST00000557285 GPATCH3Q96I76 525 aa20.02■□□□□ 0.8
VSX1-207ENST00000557285 CRNKL1Q9BZJ0 848 aaKnown RBP20.02■□□□□ 0.8
VSX1-207ENST00000557285 ARMT1Q9H993 441 aa20.02■□□□□ 0.8
VSX1-207ENST00000557285 PTPN22Q9Y2R2 807 aa20.02■□□□□ 0.8
VSX1-207ENST00000557285 MBD4O95243 580 aa20.01■□□□□ 0.79
VSX1-207ENST00000557285 ADD2P35612 726 aa20.01■□□□□ 0.79
VSX1-207ENST00000557285 HMGCS2P54868 508 aa20.01■□□□□ 0.79
VSX1-207ENST00000557285 TREML2Q5T2D2 321 aa20.01■□□□□ 0.79
VSX1-207ENST00000557285 TMED8Q6PL24 325 aaPredicted RBP20.01■□□□□ 0.79
VSX1-207ENST00000557285 C17orf99Q6UX52 265 aa20.01■□□□□ 0.79
VSX1-207ENST00000557285 ARHGEF6Q15052 776 aa20■□□□□ 0.79
VSX1-207ENST00000557285 SMCR8Q8TEV9 937 aaPredicted RBP20■□□□□ 0.79
VSX1-207ENST00000557285 AS3MTQ9HBK9 375 aa20■□□□□ 0.79
VSX1-207ENST00000557285 MCM9Q9NXL9 1143 aa20■□□□□ 0.79
VSX1-207ENST00000557285 ADGRA2Q96PE1 1338 aa20■□□□□ 0.79
VSX1-207ENST00000557285 DDX60LQ5H9U9 1706 aaKnown RBP19.99■□□□□ 0.79
VSX1-207ENST00000557285 ASNSP08243 561 aa19.99■□□□□ 0.79
VSX1-207ENST00000557285 PLCD1P51178 756 aa19.99■□□□□ 0.79
VSX1-207ENST00000557285 MLLT1Q03111 559 aaPredicted RBP19.99■□□□□ 0.79
VSX1-207ENST00000557285 EVX2Q03828 476 aa19.99■□□□□ 0.79
VSX1-207ENST00000557285 MTMR2Q13614 643 aa19.99■□□□□ 0.79
VSX1-207ENST00000557285 TTC6Q86TZ1 520 aa19.99■□□□□ 0.79
VSX1-207ENST00000557285 METTL16Q86W50 562 aaKnown RBP19.99■□□□□ 0.79
VSX1-207ENST00000557285 SERPINB13Q9UIV8 391 aa19.99■□□□□ 0.79
VSX1-207ENST00000557285 ZBTB21Q9ULJ3 1066 aa19.99■□□□□ 0.79
VSX1-207ENST00000557285 AGTPBP1Q9UPW5 1226 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms