RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 CDK5RAP2Q96SN8 1893 aa17.76■□□□□ 0.43
VRTN-202ENST00000557177 UQCRFS1P1P0C7P4 283 aa17.76■□□□□ 0.43
VRTN-202ENST00000557177 FLT3LGP49771 235 aa17.76■□□□□ 0.43
VRTN-202ENST00000557177 TREML2Q5T2D2 321 aa17.76■□□□□ 0.43
VRTN-202ENST00000557177 PROCA1Q8NCQ7 364 aaPredicted RBP17.76■□□□□ 0.43
VRTN-202ENST00000557177 SMCR8Q8TEV9 937 aaPredicted RBP17.76■□□□□ 0.43
VRTN-202ENST00000557177 CLUAP1Q96AJ1 413 aa17.76■□□□□ 0.43
VRTN-202ENST00000557177 RNF208Q9H0X6 261 aa17.76■□□□□ 0.43
VRTN-202ENST00000557177 ADCY3O60266 1144 aa17.75■□□□□ 0.43
VRTN-202ENST00000557177 IRF5Q13568 498 aa17.75■□□□□ 0.43
VRTN-202ENST00000557177 POLA2Q14181 598 aa17.75■□□□□ 0.43
VRTN-202ENST00000557177 RRP1BQ14684 758 aaKnown RBP17.75■□□□□ 0.43
VRTN-202ENST00000557177 PXYLP1Q8TE99 480 aa17.75■□□□□ 0.43
VRTN-202ENST00000557177 TBC1D2Q9BYX2 928 aa17.75■□□□□ 0.43
VRTN-202ENST00000557177 GPR108Q9NPR9 543 aa17.75■□□□□ 0.43
VRTN-202ENST00000557177 BIN2Q9UBW5 565 aaPredicted RBP17.75■□□□□ 0.43
VRTN-202ENST00000557177 DOCK3Q8IZD9 2030 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 TNPO2O14787 897 aaKnown RBP17.74■□□□□ 0.43
VRTN-202ENST00000557177 CAP2P40123 477 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 FAM110CQ1W6H9 321 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 TEX11Q8IYF3 940 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 ANKRD13CQ8N6S4 541 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 ZNF280CQ8ND82 737 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 SH3RF3Q8TEJ3 882 aaPredicted RBP17.74■□□□□ 0.43
VRTN-202ENST00000557177 U2AF1L4Q8WU68 220 aaKnown RBP17.74■□□□□ 0.43
VRTN-202ENST00000557177 UNC93B1Q9H1C4 597 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 LRP2BPQ9P2M1 347 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
VRTN-202ENST00000557177 PNMA3Q9UL41 463 aa17.74■□□□□ 0.43
VRTN-202ENST00000557177 MYO5AQ9Y4I1 1855 aaKnown RBP17.73■□□□□ 0.43
VRTN-202ENST00000557177 ELNP15502 786 aa17.73■□□□□ 0.43
VRTN-202ENST00000557177 SPP2Q13103 211 aa17.73■□□□□ 0.43
VRTN-202ENST00000557177 TNNI3KQ59H18 835 aa17.73■□□□□ 0.43
VRTN-202ENST00000557177 SSH3Q8TE77 659 aa17.73■□□□□ 0.43
VRTN-202ENST00000557177 FPGT-TNNI3KV9GXZ4 949 aa17.73■□□□□ 0.43
VRTN-202ENST00000557177 TRIOBPQ9H2D6 2365 aa17.72■□□□□ 0.43
VRTN-202ENST00000557177 SGPL1O95470 568 aa17.72■□□□□ 0.43
VRTN-202ENST00000557177 INHAP05111 366 aa17.72■□□□□ 0.43
VRTN-202ENST00000557177 SH3D19Q5HYK7 790 aa17.72■□□□□ 0.43
VRTN-202ENST00000557177 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
VRTN-202ENST00000557177 DBNDD2Q9BQY9 259 aa17.72■□□□□ 0.43
VRTN-202ENST00000557177 PI4KBQ9UBF8 816 aa17.72■□□□□ 0.43
VRTN-202ENST00000557177 USP17L5A8MUK1 530 aa17.71■□□□□ 0.43
VRTN-202ENST00000557177 CYP2E1P05181 493 aaPredicted RBP17.71■□□□□ 0.43
VRTN-202ENST00000557177 HMGCS2P54868 508 aa17.71■□□□□ 0.43
VRTN-202ENST00000557177 PPP4CP60510 307 aa17.71■□□□□ 0.43
VRTN-202ENST00000557177 TTC39AQ5SRH9 613 aa17.71■□□□□ 0.43
VRTN-202ENST00000557177 NAA16Q6N069 864 aaPredicted RBP17.71■□□□□ 0.43
VRTN-202ENST00000557177 ADGRA1Q86SQ6 560 aa17.71■□□□□ 0.43
VRTN-202ENST00000557177 METTL16Q86W50 562 aaKnown RBP17.71■□□□□ 0.43
VRTN-202ENST00000557177 DPF3Q92784 378 aa17.71■□□□□ 0.43
VRTN-202ENST00000557177 HTATIP2Q9BUP3 242 aa17.71■□□□□ 0.43
VRTN-202ENST00000557177 DHX36Q9H2U1 1008 aaKnown RBP17.71■□□□□ 0.43
VRTN-202ENST00000557177 PAK6Q9NQU5 681 aaPredicted RBP17.71■□□□□ 0.43
VRTN-202ENST00000557177 SNRKQ9NRH2 765 aa17.71■□□□□ 0.43
VRTN-202ENST00000557177 AATFQ9NY61 560 aaKnown RBP eCLIP17.71■□□□□ 0.43
VRTN-202ENST00000557177 IGSF3O75054 1194 aa17.7■□□□□ 0.42
VRTN-202ENST00000557177 FARP2O94887 1054 aaPredicted RBP17.7■□□□□ 0.42
VRTN-202ENST00000557177 BAG3O95817 575 aa17.7■□□□□ 0.42
VRTN-202ENST00000557177 PLCG2P16885 1265 aa17.7■□□□□ 0.42
VRTN-202ENST00000557177 GCLCP48506 637 aaPredicted RBP17.7■□□□□ 0.42
VRTN-202ENST00000557177 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
VRTN-202ENST00000557177 PABPC4Q13310 644 aaKnown RBP eCLIP17.7■□□□□ 0.42
VRTN-202ENST00000557177 CCDC158Q5M9N0 1113 aa17.7■□□□□ 0.42
VRTN-202ENST00000557177 COA7Q96BR5 231 aa17.7■□□□□ 0.42
VRTN-202ENST00000557177 ZNF512BQ96KM6 892 aaPredicted RBP17.7■□□□□ 0.42
VRTN-202ENST00000557177 NOL10Q9BSC4 688 aaKnown RBP17.7■□□□□ 0.42
VRTN-202ENST00000557177 DNAJC18Q9H819 358 aa17.7■□□□□ 0.42
VRTN-202ENST00000557177 FLT1P17948 1338 aa17.7■□□□□ 0.42
VRTN-202ENST00000557177 CAPN2P17655 700 aa17.69■□□□□ 0.42
VRTN-202ENST00000557177 CHRDL2Q6WN34 429 aa17.69■□□□□ 0.42
VRTN-202ENST00000557177 TGFBRAP1Q8WUH2 860 aa17.69■□□□□ 0.42
VRTN-202ENST00000557177 WDR18Q9BV38 432 aa17.69■□□□□ 0.42
VRTN-202ENST00000557177 ASCC2Q9H1I8 757 aaPredicted RBP17.69■□□□□ 0.42
VRTN-202ENST00000557177 AS3MTQ9HBK9 375 aa17.69■□□□□ 0.42
VRTN-202ENST00000557177 PLXNB2O15031 1838 aa17.69■□□□□ 0.42
VRTN-202ENST00000557177 JAG1P78504 1218 aa17.68■□□□□ 0.42
VRTN-202ENST00000557177 MAPKAPK5Q8IW41 473 aa17.68■□□□□ 0.42
VRTN-202ENST00000557177 NOP58Q9Y2X3 529 aaKnown RBP17.68■□□□□ 0.42
VRTN-202ENST00000557177 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
VRTN-202ENST00000557177 ASNSP08243 561 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 ZAP70P43403 619 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 BACE1P56817 501 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 OS9Q13438 667 aaPredicted RBP17.67■□□□□ 0.42
VRTN-202ENST00000557177 MTMR2Q13614 643 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 DEFB118Q96PH6 123 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 CRISPLD2Q9H0B8 497 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 PRO3102Q9H379 93 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 PIH1D3Q9NQM4 214 aaKnown RBP17.67■□□□□ 0.42
VRTN-202ENST00000557177 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
VRTN-202ENST00000557177 MORF4L1Q9UBU8 362 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 DBNLQ9UJU6 430 aaKnown RBP17.67■□□□□ 0.42
VRTN-202ENST00000557177 GJD2Q9UKL4 321 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 LAMA3Q16787 3333 aa17.67■□□□□ 0.42
VRTN-202ENST00000557177 HOXA7P31268 230 aaPredicted RBP17.66■□□□□ 0.42
VRTN-202ENST00000557177 SHROOM1Q2M3G4 852 aaPredicted RBP17.66■□□□□ 0.42
VRTN-202ENST00000557177 FOXP4Q8IVH2 680 aaPredicted RBP17.66■□□□□ 0.42
VRTN-202ENST00000557177 GINM1Q9NU53 330 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms