RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 FOXP4Q8IVH2 680 aaPredicted RBP21.03■□□□□ 0.96
CHGA-206ENST00000556876 SSH3Q8TE77 659 aa21.03■□□□□ 0.96
CHGA-206ENST00000556876 COA7Q96BR5 231 aa21.03■□□□□ 0.96
CHGA-206ENST00000556876 HTATIP2Q9BUP3 242 aa21.03■□□□□ 0.96
CHGA-206ENST00000556876 AK9Q5TCS8 1911 aa21.02■□□□□ 0.96
CHGA-206ENST00000556876 USP17L5A8MUK1 530 aa21.02■□□□□ 0.96
CHGA-206ENST00000556876 TNPO2O14787 897 aaKnown RBP21.02■□□□□ 0.96
CHGA-206ENST00000556876 MYCP01106 439 aaPredicted RBP21.02■□□□□ 0.96
CHGA-206ENST00000556876 CTGFP29279 349 aa21.02■□□□□ 0.96
CHGA-206ENST00000556876 CAP2P40123 477 aa21.02■□□□□ 0.96
CHGA-206ENST00000556876 TNNI3KQ59H18 835 aa21.02■□□□□ 0.96
CHGA-206ENST00000556876 TBC1D9Q6ZT07 1266 aa21.02■□□□□ 0.96
CHGA-206ENST00000556876 TMEM57Q8N5G2 664 aa21.02■□□□□ 0.96
CHGA-206ENST00000556876 RNF208Q9H0X6 261 aa21.02■□□□□ 0.96
CHGA-206ENST00000556876 FPGT-TNNI3KV9GXZ4 949 aa21.02■□□□□ 0.96
CHGA-206ENST00000556876 SURF6O75683 361 aaKnown RBP21.01■□□□□ 0.95
CHGA-206ENST00000556876 CCL5P13501 91 aa21.01■□□□□ 0.95
CHGA-206ENST00000556876 PRKCZQ05513 592 aa21.01■□□□□ 0.95
CHGA-206ENST00000556876 SPP2Q13103 211 aa21.01■□□□□ 0.95
CHGA-206ENST00000556876 FAM110CQ1W6H9 321 aa21.01■□□□□ 0.95
CHGA-206ENST00000556876 ZNF384Q8TF68 577 aa21.01■□□□□ 0.95
CHGA-206ENST00000556876 TRIM34Q9BYJ4 488 aa21.01■□□□□ 0.95
CHGA-206ENST00000556876 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
CHGA-206ENST00000556876 ADCY3O60266 1144 aa21■□□□□ 0.95
CHGA-206ENST00000556876 ASNSP08243 561 aa21■□□□□ 0.95
CHGA-206ENST00000556876 FLT3LGP49771 235 aa20.99■□□□□ 0.95
CHGA-206ENST00000556876 MTFR1Q15390 333 aa20.99■□□□□ 0.95
CHGA-206ENST00000556876 SH3D19Q5HYK7 790 aa20.99■□□□□ 0.95
CHGA-206ENST00000556876 PI16Q6UXB8 463 aa20.99■□□□□ 0.95
CHGA-206ENST00000556876 WDR18Q9BV38 432 aa20.99■□□□□ 0.95
CHGA-206ENST00000556876 MYH2Q9UKX2 1941 aa20.99■□□□□ 0.95
CHGA-206ENST00000556876 ECM2O94769 699 aaPredicted RBP20.98■□□□□ 0.95
CHGA-206ENST00000556876 DPF3Q92784 378 aa20.98■□□□□ 0.95
CHGA-206ENST00000556876 NR2E3Q9Y5X4 410 aa20.98■□□□□ 0.95
CHGA-206ENST00000556876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.98■□□□□ 0.95
CHGA-206ENST00000556876 C19orf81C9J6K1 198 aa20.97■□□□□ 0.95
CHGA-206ENST00000556876 HLA-DOAP06340 250 aa20.97■□□□□ 0.95
CHGA-206ENST00000556876 MS4A1P11836 297 aa20.97■□□□□ 0.95
CHGA-206ENST00000556876 METTL16Q86W50 562 aaKnown RBP20.97■□□□□ 0.95
CHGA-206ENST00000556876 ERC1Q8IUD2 1116 aa20.97■□□□□ 0.95
CHGA-206ENST00000556876 CRACR2BQ8N4Y2 399 aaPredicted RBP20.97■□□□□ 0.95
CHGA-206ENST00000556876 ANKRD13CQ8N6S4 541 aa20.97■□□□□ 0.95
CHGA-206ENST00000556876 SH3RF3Q8TEJ3 882 aaPredicted RBP20.97■□□□□ 0.95
CHGA-206ENST00000556876 AATFQ9NY61 560 aaKnown RBP eCLIP20.97■□□□□ 0.95
CHGA-206ENST00000556876 TMOD4Q9NZQ9 345 aa20.97■□□□□ 0.95
CHGA-206ENST00000556876 SGPL1O95470 568 aa20.96■□□□□ 0.95
CHGA-206ENST00000556876 HSP90AB4PQ58FF6 505 aa20.96■□□□□ 0.95
CHGA-206ENST00000556876 ITPRIPQ8IWB1 547 aa20.96■□□□□ 0.95
CHGA-206ENST00000556876 U2AF1L4Q8WU68 220 aaKnown RBP20.96■□□□□ 0.95
CHGA-206ENST00000556876 GTF3C2Q8WUA4 911 aaPredicted RBP20.96■□□□□ 0.95
CHGA-206ENST00000556876 DBNDD2Q9BQY9 259 aa20.96■□□□□ 0.95
CHGA-206ENST00000556876 ZBTB7BO15156 539 aaPredicted RBP20.95■□□□□ 0.94
CHGA-206ENST00000556876 BACE1P56817 501 aa20.95■□□□□ 0.94
CHGA-206ENST00000556876 TGFBRAP1Q8WUH2 860 aa20.95■□□□□ 0.94
CHGA-206ENST00000556876 SNRKQ9NRH2 765 aa20.95■□□□□ 0.94
CHGA-206ENST00000556876 GABRQQ9UN88 632 aa20.95■□□□□ 0.94
CHGA-206ENST00000556876 CYP2E1P05181 493 aaPredicted RBP20.94■□□□□ 0.94
CHGA-206ENST00000556876 HOXA7P31268 230 aaPredicted RBP20.94■□□□□ 0.94
CHGA-206ENST00000556876 HMGCS2P54868 508 aa20.94■□□□□ 0.94
CHGA-206ENST00000556876 HNRNPUQ00839 825 aaKnown RBP eCLIP20.94■□□□□ 0.94
CHGA-206ENST00000556876 TREML2Q5T2D2 321 aa20.94■□□□□ 0.94
CHGA-206ENST00000556876 SHISA4Q96DD7 197 aa20.94■□□□□ 0.94
CHGA-206ENST00000556876 DOCK2Q92608 1830 aa20.93■□□□□ 0.94
CHGA-206ENST00000556876 H0YGN5 161 aa20.93■□□□□ 0.94
CHGA-206ENST00000556876 INHAP05111 366 aa20.93■□□□□ 0.94
CHGA-206ENST00000556876 IRX3P78415 501 aaPredicted RBP20.93■□□□□ 0.94
CHGA-206ENST00000556876 MAP3K12Q12852 859 aa20.93■□□□□ 0.94
CHGA-206ENST00000556876 UBE2Q1Q7Z7E8 422 aa20.93■□□□□ 0.94
CHGA-206ENST00000556876 ASCC2Q9H1I8 757 aaPredicted RBP20.93■□□□□ 0.94
CHGA-206ENST00000556876 TNNQ9UQP3 1299 aa20.93■□□□□ 0.94
CHGA-206ENST00000556876 FAM196BA6NMK8 535 aa20.92■□□□□ 0.94
CHGA-206ENST00000556876 USP17L10C9JJH3 530 aa20.92■□□□□ 0.94
CHGA-206ENST00000556876 FARP2O94887 1054 aaPredicted RBP20.92■□□□□ 0.94
CHGA-206ENST00000556876 TFRCP02786 760 aaKnown RBP20.92■□□□□ 0.94
CHGA-206ENST00000556876 MAPKAPK5Q8IW41 473 aa20.92■□□□□ 0.94
CHGA-206ENST00000556876 UNC93B1Q9H1C4 597 aa20.92■□□□□ 0.94
CHGA-206ENST00000556876 MORF4L1Q9UBU8 362 aa20.92■□□□□ 0.94
CHGA-206ENST00000556876 COLQQ9Y215 455 aaPredicted RBP20.92■□□□□ 0.94
CHGA-206ENST00000556876 FLT1P17948 1338 aa20.92■□□□□ 0.94
CHGA-206ENST00000556876 SLURP2P0DP57 97 aa20.91■□□□□ 0.94
CHGA-206ENST00000556876 CYP7A1P22680 504 aa20.91■□□□□ 0.94
CHGA-206ENST00000556876 ZAP70P43403 619 aa20.91■□□□□ 0.94
CHGA-206ENST00000556876 TRMT44Q8IYL2 757 aaKnown RBP20.91■□□□□ 0.94
CHGA-206ENST00000556876 CHMP4BQ9H444 224 aaKnown RBP20.91■□□□□ 0.94
CHGA-206ENST00000556876 PAK6Q9NQU5 681 aaPredicted RBP20.91■□□□□ 0.94
CHGA-206ENST00000556876 DBNLQ9UJU6 430 aaKnown RBP20.91■□□□□ 0.94
CHGA-206ENST00000556876 HMGCRP04035 888 aa20.9■□□□□ 0.94
CHGA-206ENST00000556876 TTF1Q15361 905 aaPredicted RBP20.9■□□□□ 0.94
CHGA-206ENST00000556876 TTC6Q86TZ1 520 aa20.9■□□□□ 0.94
CHGA-206ENST00000556876 CCDC84Q86UT8 332 aaPredicted RBP20.9■□□□□ 0.94
CHGA-206ENST00000556876 ANKLE1Q8NAG6 615 aa20.9■□□□□ 0.94
CHGA-206ENST00000556876 GPRC5AQ8NFJ5 357 aa20.9■□□□□ 0.94
CHGA-206ENST00000556876 TAOK2Q9UL54 1235 aa20.9■□□□□ 0.94
CHGA-206ENST00000556876 PALD1Q9ULE6 856 aa20.9■□□□□ 0.94
CHGA-206ENST00000556876 IDH1O75874 414 aaKnown RBP20.89■□□□□ 0.93
CHGA-206ENST00000556876 ELNP15502 786 aa20.89■□□□□ 0.93
CHGA-206ENST00000556876 USP5P45974 858 aa20.89■□□□□ 0.93
CHGA-206ENST00000556876 MTMR2Q13614 643 aa20.89■□□□□ 0.93
CHGA-206ENST00000556876 CCAR1Q8IX12 1150 aaKnown RBP20.89■□□□□ 0.93
CHGA-206ENST00000556876 SOCS4Q8WXH5 440 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms