RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 SCYL3Q8IZE3 742 aa27.62■■■□□ 2.01
TDP1-216ENST00000556867 MS4A4AQ96JQ5 239 aa27.62■■■□□ 2.01
TDP1-216ENST00000556867 PALD1Q9ULE6 856 aa27.62■■■□□ 2.01
TDP1-216ENST00000556867 FAM196BA6NMK8 535 aa27.61■■■□□ 2.01
TDP1-216ENST00000556867 GTF2A2P52657 109 aa27.61■■■□□ 2.01
TDP1-216ENST00000556867 COL13A1Q5TAT6 717 aaPredicted RBP27.61■■■□□ 2.01
TDP1-216ENST00000556867 METTL16Q86W50 562 aaKnown RBP27.61■■■□□ 2.01
TDP1-216ENST00000556867 IFNL1Q8IU54 200 aa27.61■■■□□ 2.01
TDP1-216ENST00000556867 LCORLQ8N3X6 602 aa27.61■■■□□ 2.01
TDP1-216ENST00000556867 LNPKQ9C0E8 428 aa27.61■■■□□ 2.01
TDP1-216ENST00000556867 SAP30BPQ9UHR5 308 aaKnown RBP27.61■■■□□ 2.01
TDP1-216ENST00000556867 CTNND1O60716 968 aaKnown RBP27.6■■■□□ 2.01
TDP1-216ENST00000556867 CHGBP05060 677 aa27.6■■■□□ 2.01
TDP1-216ENST00000556867 NUCB1Q02818 461 aa27.6■■■□□ 2.01
TDP1-216ENST00000556867 IGF2BP3O00425 579 aaKnown RBP eCLIP27.59■■■□□ 2.01
TDP1-216ENST00000556867 IRF6O14896 467 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 MBD4O95243 580 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 ALDH1A1P00352 501 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 HLA-DOAP06340 250 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 PDE1AP54750 535 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 B4GALNT3Q6L9W6 998 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 CHD1LQ86WJ1 897 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 FOXP4Q8IVH2 680 aaPredicted RBP27.59■■■□□ 2.01
TDP1-216ENST00000556867 CFHR5Q9BXR6 569 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 ARMT1Q9H993 441 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 ATAD5Q96QE3 1844 aa27.59■■■□□ 2.01
TDP1-216ENST00000556867 ZFYP08048 801 aaPredicted RBP27.58■■■□□ 2.01
TDP1-216ENST00000556867 BRI3BPQ8WY22 251 aa27.58■■■□□ 2.01
TDP1-216ENST00000556867 PICK1Q9NRD5 415 aa27.58■■■□□ 2.01
TDP1-216ENST00000556867 CASP8AP2Q9UKL3 1982 aa27.58■■■□□ 2.01
TDP1-216ENST00000556867 PHIPQ8WWQ0 1821 aa27.57■■■□□ 2
TDP1-216ENST00000556867 SNAPC2Q13487 334 aa27.57■■■□□ 2
TDP1-216ENST00000556867 PTPN18Q99952 460 aa27.57■■■□□ 2
TDP1-216ENST00000556867 DNAJC18Q9H819 358 aa27.57■■■□□ 2
TDP1-216ENST00000556867 KCNH4Q9UQ05 1017 aa27.57■■■□□ 2
TDP1-216ENST00000556867 CCL15-CCL14A0A0B4J2E2 113 aa27.56■■■□□ 2
TDP1-216ENST00000556867 CETPP11597 493 aa27.56■■■□□ 2
TDP1-216ENST00000556867 PTPRAP18433 802 aa27.56■■■□□ 2
TDP1-216ENST00000556867 CCL15Q16663 113 aa27.56■■■□□ 2
TDP1-216ENST00000556867 LRRFIP1Q32MZ4 808 aaKnown RBP27.56■■■□□ 2
TDP1-216ENST00000556867 OTUD7BQ6GQQ9 843 aa27.56■■■□□ 2
TDP1-216ENST00000556867 CRACR2BQ8N4Y2 399 aaPredicted RBP27.56■■■□□ 2
TDP1-216ENST00000556867 EHD4Q9H223 541 aa27.56■■■□□ 2
TDP1-216ENST00000556867 RNF113AO15541 343 aaKnown RBP27.55■■■□□ 2
TDP1-216ENST00000556867 TTC6Q86TZ1 520 aa27.55■■■□□ 2
TDP1-216ENST00000556867 SDR42E1Q8WUS8 393 aa27.55■■■□□ 2
TDP1-216ENST00000556867 APPBP2Q92624 585 aa27.55■■■□□ 2
TDP1-216ENST00000556867 TRIM34Q9BYJ4 488 aa27.55■■■□□ 2
TDP1-216ENST00000556867 PUS7LQ9H0K6 701 aaKnown RBP27.55■■■□□ 2
TDP1-216ENST00000556867 DCP1AQ9NPI6 582 aaPredicted RBP27.55■■■□□ 2
TDP1-216ENST00000556867 PTPRFP10586 1907 aa27.54■■■□□ 2
TDP1-216ENST00000556867 CAP2P40123 477 aa27.54■■■□□ 2
TDP1-216ENST00000556867 RRP1BQ14684 758 aaKnown RBP27.54■■■□□ 2
TDP1-216ENST00000556867 SLC4A8Q2Y0W8 1093 aa27.54■■■□□ 2
TDP1-216ENST00000556867 BAZ2AQ9UIF9 1905 aaKnown RBP27.53■■■□□ 2
TDP1-216ENST00000556867 TBC1D8O95759 1140 aa27.53■■■□□ 2
TDP1-216ENST00000556867 FSD1Q9BTV5 496 aa27.53■■■□□ 2
TDP1-216ENST00000556867 ATP8A2Q9NTI2 1148 aa27.53■■■□□ 2
TDP1-216ENST00000556867 MCM9Q9NXL9 1143 aa27.53■■■□□ 2
TDP1-216ENST00000556867 SERPINB13Q9UIV8 391 aa27.53■■■□□ 2
TDP1-216ENST00000556867 ZHX2Q9Y6X8 837 aa27.53■■■□□ 2
TDP1-216ENST00000556867 CXCL11O14625 94 aa27.52■■■□□ 2
TDP1-216ENST00000556867 PRKAB2O43741 272 aa27.52■■■□□ 2
TDP1-216ENST00000556867 NOM1Q5C9Z4 860 aaKnown RBP27.52■■■□□ 2
TDP1-216ENST00000556867 OSBP2Q969R2 916 aa27.52■■■□□ 2
TDP1-216ENST00000556867 ZCCHC17Q9NP64 241 aaKnown RBP27.51■■□□□ 1.99
TDP1-216ENST00000556867 AFG3L2Q9Y4W6 797 aa27.51■■□□□ 1.99
TDP1-216ENST00000556867 POLR3DP05423 398 aaPredicted RBP27.5■■□□□ 1.99
TDP1-216ENST00000556867 PLCD1P51178 756 aa27.5■■□□□ 1.99
TDP1-216ENST00000556867 PLEKHM2Q8IWE5 1019 aa27.5■■□□□ 1.99
TDP1-216ENST00000556867 FAM43AQ8N2R8 423 aa27.5■■□□□ 1.99
TDP1-216ENST00000556867 EVI5LQ96CN4 794 aa27.5■■□□□ 1.99
TDP1-216ENST00000556867 STRBPQ96SI9 672 aaKnown RBP27.5■■□□□ 1.99
TDP1-216ENST00000556867 OSBPL3Q9H4L5 887 aa27.5■■□□□ 1.99
TDP1-216ENST00000556867 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.5■■□□□ 1.99
TDP1-216ENST00000556867 TBC1D2Q9BYX2 928 aa27.49■■□□□ 1.99
TDP1-216ENST00000556867 R3HDMLQ9H3Y0 253 aa27.49■■□□□ 1.99
TDP1-216ENST00000556867 GINM1Q9NU53 330 aa27.49■■□□□ 1.99
TDP1-216ENST00000556867 SLC4A4Q9Y6R1 1079 aa27.49■■□□□ 1.99
TDP1-216ENST00000556867 BTBD19C9JJ37 291 aa27.48■■□□□ 1.99
TDP1-216ENST00000556867 ASNSP08243 561 aa27.48■■□□□ 1.99
TDP1-216ENST00000556867 GABPAQ06546 454 aa27.48■■□□□ 1.99
TDP1-216ENST00000556867 MOGSQ13724 837 aa27.48■■□□□ 1.99
TDP1-216ENST00000556867 TATDN1Q6P1N9 297 aa27.48■■□□□ 1.99
TDP1-216ENST00000556867 CCDC84Q86UT8 332 aaPredicted RBP27.48■■□□□ 1.99
TDP1-216ENST00000556867 TAOK2Q9UL54 1235 aa27.48■■□□□ 1.99
TDP1-216ENST00000556867 A0A0G2JLL6 359 aaPredicted RBP27.47■■□□□ 1.99
TDP1-216ENST00000556867 GPR25O00155 361 aa27.47■■□□□ 1.99
TDP1-216ENST00000556867 CRHR2Q13324 411 aa27.47■■□□□ 1.99
TDP1-216ENST00000556867 ZMYM1Q5SVZ6 1142 aa27.47■■□□□ 1.99
TDP1-216ENST00000556867 PRRT2Q7Z6L0 340 aaPredicted RBP27.47■■□□□ 1.99
TDP1-216ENST00000556867 DDRGK1Q96HY6 314 aa27.47■■□□□ 1.99
TDP1-216ENST00000556867 USP17L5A8MUK1 530 aa27.46■■□□□ 1.99
TDP1-216ENST00000556867 M0R2C6 588 aa27.46■■□□□ 1.99
TDP1-216ENST00000556867 GPAA1O43292 621 aa27.46■■□□□ 1.99
TDP1-216ENST00000556867 JAG1P78504 1218 aa27.46■■□□□ 1.99
TDP1-216ENST00000556867 ANKRD23Q86SG2 305 aa27.46■■□□□ 1.99
TDP1-216ENST00000556867 TICAM2Q86XR7 235 aa27.46■■□□□ 1.99
TDP1-216ENST00000556867 TNS4Q8IZW8 715 aa27.46■■□□□ 1.99
TDP1-216ENST00000556867 ZBTB21Q9ULJ3 1066 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms