RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 GAKO14976 1311 aa8.95□□□□□ -0.98
SCFD1-222ENST00000556768 GPR75-ASB3A0A0A6YYF3 556 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 MCAMP43121 646 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 NAA16Q6N069 864 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-222ENST00000556768 CLASRPQ8N2M8 674 aaKnown RBP8.94□□□□□ -0.98
SCFD1-222ENST00000556768 NSUN4Q96CB9 384 aaKnown RBP8.94□□□□□ -0.98
SCFD1-222ENST00000556768 DBNDD2Q9BQY9 259 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 FAM198AQ9UFP1 575 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 RPAP1Q9BWH6 1393 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-222ENST00000556768 SSC5DA1L4H1 1573 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 GRXCR2A6NFK2 248 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 A6NJR5 290 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 IGF2BP3O00425 579 aaKnown RBP eCLIP8.94□□□□□ -0.98
SCFD1-222ENST00000556768 PPIL2Q13356 520 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 PDE3AQ14432 1141 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 TAF1CQ15572 869 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-222ENST00000556768 PI16Q6UXB8 463 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 CERS3Q8IU89 383 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 KIF1BPQ96EK5 621 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 ERO1AQ96HE7 468 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 CCDC8Q9H0W5 538 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-222ENST00000556768 SNRKQ9NRH2 765 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 EXOC6BQ9Y2D4 811 aa8.94□□□□□ -0.98
SCFD1-222ENST00000556768 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-222ENST00000556768 IFIT2P09913 472 aaKnown RBP8.93□□□□□ -0.98
SCFD1-222ENST00000556768 GJA5P36382 358 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 SP3Q02447 781 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 CRHR2Q13324 411 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 KIF22Q14807 665 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 TMED8Q6PL24 325 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-222ENST00000556768 AACSQ86V21 672 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 TEX11Q8IYF3 940 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 TRIM34Q9BYJ4 488 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 BCL11AQ9H165 835 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 ZCCHC17Q9NP64 241 aaKnown RBP8.93□□□□□ -0.98
SCFD1-222ENST00000556768 ZBTB40Q9NUA8 1239 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 ZNF112Q9UJU3 913 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 SNCAIPQ9Y6H5 919 aa8.93□□□□□ -0.98
SCFD1-222ENST00000556768 RAB11FIP3O75154 756 aa8.92□□□□□ -0.98
SCFD1-222ENST00000556768 IDH1O75874 414 aaKnown RBP8.92□□□□□ -0.98
SCFD1-222ENST00000556768 OSBPP22059 807 aa8.92□□□□□ -0.98
SCFD1-222ENST00000556768 INPP5BP32019 993 aa8.92□□□□□ -0.98
SCFD1-222ENST00000556768 MAP3K12Q12852 859 aa8.92□□□□□ -0.98
SCFD1-222ENST00000556768 HIC1Q14526 733 aa8.92□□□□□ -0.98
SCFD1-222ENST00000556768 FBXO46Q6PJ61 603 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-222ENST00000556768 BRI3BPQ8WY22 251 aa8.92□□□□□ -0.98
SCFD1-222ENST00000556768 EAF2Q96CJ1 260 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-222ENST00000556768 PTPN18Q99952 460 aa8.92□□□□□ -0.98
SCFD1-222ENST00000556768 DHX36Q9H2U1 1008 aaKnown RBP8.92□□□□□ -0.98
SCFD1-222ENST00000556768 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.92□□□□□ -0.985e-6■■■□□ 17
SCFD1-222ENST00000556768 DBNLQ9UJU6 430 aaKnown RBP8.92□□□□□ -0.98
SCFD1-222ENST00000556768 TRIM17Q9Y577 477 aa8.92□□□□□ -0.98
SCFD1-222ENST00000556768 CENPFP49454 3210 aa8.92□□□□□ -0.98
SCFD1-222ENST00000556768 CTNND1O60716 968 aaKnown RBP8.91□□□□□ -0.98
SCFD1-222ENST00000556768 CYP2E1P05181 493 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-222ENST00000556768 CD44P16070 742 aaKnown RBP8.91□□□□□ -0.98
SCFD1-222ENST00000556768 FECHP22830 423 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 ZAP70P43403 619 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 MLLT1Q03111 559 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-222ENST00000556768 TTF1Q15361 905 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-222ENST00000556768 FASTKD5Q7L8L6 764 aaKnown RBP8.91□□□□□ -0.98
SCFD1-222ENST00000556768 ZFPM1Q8IX07 1006 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 RHPN1Q8TCX5 695 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 TMC2Q8TDI7 906 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 EFCC1Q9HA90 598 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 AATFQ9NY61 560 aaKnown RBP eCLIP8.91□□□□□ -0.98
SCFD1-222ENST00000556768 ZHX2Q9Y6X8 837 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 DDTLA6NHG4 134 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-222ENST00000556768 CXCL11O14625 94 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 TRAK2O60296 914 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 TBC1D12O60347 775 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 RHBDL3P58872 404 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 NOL9Q5SY16 702 aaKnown RBP8.91□□□□□ -0.98
SCFD1-222ENST00000556768 SCYL3Q8IZE3 742 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 R3HDMLQ9H3Y0 253 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 IL1RAPL2Q9NP60 686 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 PI4KBQ9UBF8 816 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 HPS5Q9UPZ3 1129 aa8.91□□□□□ -0.98
SCFD1-222ENST00000556768 TLR2O60603 784 aa8.9□□□□□ -0.98
SCFD1-222ENST00000556768 PDIA4P13667 645 aaKnown RBP8.9□□□□□ -0.98
SCFD1-222ENST00000556768 CYP7A1P22680 504 aa8.9□□□□□ -0.98
SCFD1-222ENST00000556768 PPP4CP60510 307 aa8.9□□□□□ -0.98
SCFD1-222ENST00000556768 MAP3K10Q02779 954 aa8.9□□□□□ -0.98
SCFD1-222ENST00000556768 NBPF11Q86T75 865 aa8.9□□□□□ -0.98
SCFD1-222ENST00000556768 PLPP6Q8IY26 295 aa8.9□□□□□ -0.98
SCFD1-222ENST00000556768 FAM43AQ8N2R8 423 aa8.9□□□□□ -0.98
SCFD1-222ENST00000556768 CRACR2BQ8N4Y2 399 aaPredicted RBP8.9□□□□□ -0.98
SCFD1-222ENST00000556768 MS4A3Q96HJ5 214 aa8.9□□□□□ -0.98
SCFD1-222ENST00000556768 OSBPL5Q9H0X9 879 aaPredicted RBP8.9□□□□□ -0.98
SCFD1-222ENST00000556768 DDX4Q9NQI0 724 aaKnown RBP8.9□□□□□ -0.98
SCFD1-222ENST00000556768 HERC5Q9UII4 1024 aaKnown RBP8.9□□□□□ -0.98
SCFD1-222ENST00000556768 PHF20L1A8MW92 1017 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 BTBD19C9JJ37 291 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 PDHXO00330 501 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 HLA-DOAP06340 250 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 PTPRAP18433 802 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 ANKRD23Q86SG2 305 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 FOXP4Q8IVH2 680 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-222ENST00000556768 CCDC82Q8N4S0 544 aa8.89□□□□□ -0.99
SCFD1-222ENST00000556768 SH3RF3Q8TEJ3 882 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms