RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PDE6AP16499 860 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 MAP3K12Q12852 859 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 TMED8Q6PL24 325 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-224ENST00000556737 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 CCDC84Q86UT8 332 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-224ENST00000556737 METTL16Q86W50 562 aaKnown RBP12.57□□□□□ -0.4
SHMT2-224ENST00000556737 MIGA1Q8NAN2 632 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 CD99L2Q8TCZ2 262 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 DNAJC2Q99543 621 aaKnown RBP12.57□□□□□ -0.4
SHMT2-224ENST00000556737 RIOK1Q9BRS2 568 aaKnown RBP12.57□□□□□ -0.4
SHMT2-224ENST00000556737 LRRCC1Q9C099 1032 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.57□□□□□ -0.4
SHMT2-224ENST00000556737 HPS5Q9UPZ3 1129 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
SHMT2-224ENST00000556737 A0A0G2JLL6 359 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-224ENST00000556737 CXCL11O14625 94 aa12.56□□□□□ -0.4
SHMT2-224ENST00000556737 ATP5JP18859 108 aa12.56□□□□□ -0.4
SHMT2-224ENST00000556737 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-224ENST00000556737 PKN2Q16513 984 aaKnown RBP12.56□□□□□ -0.4
SHMT2-224ENST00000556737 GPAT2Q6NUI2 795 aa12.56□□□□□ -0.4
SHMT2-224ENST00000556737 OTOP1Q7RTM1 612 aa12.56□□□□□ -0.4
SHMT2-224ENST00000556737 PRRT2Q7Z6L0 340 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-224ENST00000556737 DHX36Q9H2U1 1008 aaKnown RBP12.56□□□□□ -0.4
SHMT2-224ENST00000556737 DCTPP1Q9H773 170 aa12.56□□□□□ -0.4
SHMT2-224ENST00000556737 ZFYVE28Q9HCC9 887 aa12.56□□□□□ -0.4
SHMT2-224ENST00000556737 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
SHMT2-224ENST00000556737 HERC5Q9UII4 1024 aaKnown RBP12.56□□□□□ -0.4
SHMT2-224ENST00000556737 AFG3L2Q9Y4W6 797 aa12.56□□□□□ -0.4
SHMT2-224ENST00000556737 RBBP6Q7Z6E9 1792 aaKnown RBP12.56□□□□□ -0.4
SHMT2-224ENST00000556737 TLR2O60603 784 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 JAG1P78504 1218 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 SP3Q02447 781 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 SHROOM1Q2M3G4 852 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-224ENST00000556737 FBXO46Q6PJ61 603 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-224ENST00000556737 CERS3Q8IU89 383 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 ERO1AQ96HE7 468 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 CRBNQ96SW2 442 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 HAUS7Q99871 368 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 BOLA2Q9H3K6 86 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 PAG1Q9NWQ8 432 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 PI4KBQ9UBF8 816 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 SAP30BPQ9UHR5 308 aaKnown RBP12.55□□□□□ -0.4
SHMT2-224ENST00000556737 PALD1Q9ULE6 856 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 SUPT16HQ9Y5B9 1047 aaKnown RBP12.55□□□□□ -0.4
SHMT2-224ENST00000556737 ZHX2Q9Y6X8 837 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 ZNF532Q9HCE3 1301 aa12.55□□□□□ -0.4
SHMT2-224ENST00000556737 CENPFP49454 3210 aa12.54□□□□□ -0.4
SHMT2-224ENST00000556737 PDHXO00330 501 aa12.54□□□□□ -0.4
SHMT2-224ENST00000556737 CAP2P40123 477 aa12.54□□□□□ -0.4
SHMT2-224ENST00000556737 SLFNL1Q499Z3 407 aa12.54□□□□□ -0.4
SHMT2-224ENST00000556737 SLC9C2Q5TAH2 1124 aa12.54□□□□□ -0.4
SHMT2-224ENST00000556737 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
SHMT2-224ENST00000556737 TRIM17Q9Y577 477 aa12.54□□□□□ -0.4
SHMT2-224ENST00000556737 MGAMO43451 1857 aa12.53□□□□□ -0.4
SHMT2-224ENST00000556737 BRCA2P51587 3418 aa12.53□□□□□ -0.4
SHMT2-224ENST00000556737 TRIM75PA6NK02 468 aa12.53□□□□□ -0.4
SHMT2-224ENST00000556737 CHGBP05060 677 aa12.53□□□□□ -0.4
SHMT2-224ENST00000556737 ADD2P35612 726 aa12.53□□□□□ -0.4
SHMT2-224ENST00000556737 SLC4A8Q2Y0W8 1093 aa12.53□□□□□ -0.4
SHMT2-224ENST00000556737 C17orf99Q6UX52 265 aa12.53□□□□□ -0.4
SHMT2-224ENST00000556737 LCORLQ8N3X6 602 aa12.53□□□□□ -0.4
SHMT2-224ENST00000556737 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.4
SHMT2-224ENST00000556737 MAGEB6P1A0A0J9YX57 407 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 CTGFP29279 349 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 USP5P45974 858 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 RGS19P49795 217 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 EVX2Q03828 476 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 ARHGAP39Q9C0H5 1083 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 EHD4Q9H223 541 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 ECHDC1Q9NTX5 307 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 PTPN22Q9Y2R2 807 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 SLC45A1Q9Y2W3 748 aa12.52□□□□□ -0.41
SHMT2-224ENST00000556737 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-224ENST00000556737 GDF11O95390 407 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 HLA-DOAP06340 250 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 CYP2C8P10632 490 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 BCRP11274 1271 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 SOX10P56693 466 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 LACTBP83111 547 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-224ENST00000556737 TREML2Q5T2D2 321 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 GADL1Q6ZQY3 521 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 FASTKD5Q7L8L6 764 aaKnown RBP12.51□□□□□ -0.41
SHMT2-224ENST00000556737 FOXP4Q8IVH2 680 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-224ENST00000556737 ZNF280CQ8ND82 737 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 PARK7Q99497 189 aaKnown RBP12.51□□□□□ -0.41
SHMT2-224ENST00000556737 TBC1D2Q9BYX2 928 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 EFCC1Q9HA90 598 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 ZBTB21Q9ULJ3 1066 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 AGTPBP1Q9UPW5 1226 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 SALL3Q9BXA9 1300 aa12.51□□□□□ -0.41
SHMT2-224ENST00000556737 MYH8P13535 1937 aa12.5□□□□□ -0.41
SHMT2-224ENST00000556737 USP17L5A8MUK1 530 aa12.5□□□□□ -0.41
SHMT2-224ENST00000556737 SPP2Q13103 211 aa12.5□□□□□ -0.41
SHMT2-224ENST00000556737 SH3D19Q5HYK7 790 aa12.5□□□□□ -0.41
SHMT2-224ENST00000556737 TATDN1Q6P1N9 297 aa12.5□□□□□ -0.41
SHMT2-224ENST00000556737 CRACR2BQ8N4Y2 399 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-224ENST00000556737 PROCA1Q8NCQ7 364 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-224ENST00000556737 OTUD7AQ8TE49 926 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms